Pseudozyma flocculosa: PFL1_03203
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Entry
PFL1_03203 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_03203
03036 Chromosome and associated proteins [BR:
pfp03036
]
PFL1_03203
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PFL1_03203
Chromosome and associated proteins [BR:
pfp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PFL1_03203
SLIK complex
PFL1_03203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHD1-like_C
Helicase_C
HTH_CHD1_Hrp3
Chromo
ResIII
HDA2-3
DEAD
Cdh1_DBD_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
19317313
NCBI-ProteinID:
XP_007878909
UniProt:
A0A061HA27
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MNGQDGSSAARSSPKRESSPLESLESSDDDHSQQQRFANAVKSGDRSPASPSSSKQSASR
ASSSSPAPRAAAISGAGSLKESSPAAQSSHSSSRAPFKLKSHFAEAEADPDLYGLRRSGR
APKKQYIDGSESEDGGSSSVGARRRAAKASSRRSSARISDDDDDDGADAARDAADDDDDD
EDDDADDDEDDDGDFRASSSKGNKASSSSRRGKPAKKLSSKASKKAKAFGGSAARLSSAD
LEASRVSSRNGKRIPNYTEDYADLSDDDPFEDEADRRAQQWAAEAGAAEEEEDVIEAIIG
HERDEAHLDDPEDVPTENMRFVVKWKGYSHLHDTQELYEFLKRFKGFKRVDNYIKHVFLR
ERALMTDPNASREDIETLQIEKERQREAIESYKTVERVVAQRDNPPNKDVPYPHLAFLCK
WKGLAYADCTWEPEEEIKQIGKPAIDRYLERTTSGMVPWRSENFSKGRPKYKRMTEQPAY
ITPGGTLKDFQMTGLNWLAYLWSKNENGILADEMGLGKTVQTVAFLSYLVHSCYQYGPFL
VVVPLSTLPAWMNQFEVWAPDLNVIAYMGNSASRQMIRDYEFFQGSGSGAGGGRAKVKFN
VLVTTYEFILKDKTELQQVKWQYLAVDEAHRLKNSESQLYDALKSFNAAGKLLITGTPLQ
NNVKELIALLHFLRPDQFDLDLDFDLNDVDQGMIKDLHEKLDNVMLRRLKRDVVKEMPTK
SEKILRVEMSAMQQRMYKAILTRNYSLLSGATTAQFSLLNIAIELKKASNHPYLFDGTEA
ISDNREETLRGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLRGYIH
QRLDGTISSEVRKKAIEHFNAEGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQND
LQAMARAHRLNSKFHVSVFRFLTKDTVEEDVLERAKKKMVLEYAIINQMDTSGTNFAPKS
GAKNTTQFSKEELGAILKFGAQNMFKSDNDDGQQKKLDEMDLDDILSHAEAHETEVDPTG
SSAGGQGFLQSFAQVQDFKADVSWDDIIPLEDRLKAEEEERQKAVEEAAALSSXXXXXXX
XXXSGASALKRQRKTAAQRSVELKERDLRVLIRGIQRWGDIRYRGDPIIREGKLHDKNRQ
VLIQISDELVRLCEEAVAEHAAFMKGKQERGEEISSALRQKAVLVTCRGITGINADTVLV
RHYDLRLLAETLDNVADPLQWRMPVEHLKATLNWAGGWSNVDDAMLLVGIWKYGFGAWEQ
IEADEDFDLKGKFFLEEGKKAGQDSHAADKDAPPSGTSGPPQGKARPIPNAIHLVRRGDY
LLKVLREHDNSIKGIGEGAQPQAVKHSIGGGGGGGGGGGGSSRKKVRRSASPSNASPTPA
GGKGPGRSSAAAAKAGGNRPTPVYSSDSSDEAHSSMDEAECKELMRPCKRQLKRLRDGTD
HLDRDQKVATLKECLSAIGGHIDALLEGKFAALPAKEREKWFNHLWAFSAFFWPKKVKPS
KLRAIFDKLVGNGGNGGGGGSAPPAATAAAATTPATPAAAAPTAASATPAAEGATAAGAA
TSAATPSTPAAAASTANTTTTADARAATPSSTTGANGHASESIKRKASGSGGTPLPDGPI
PKKARTSDAHPPHAQRPGGAPYSPSPSAASTGLPHASGYAPAGSAAAASDRGGSRESGGY
RDHSRDHPRDRDRERDRDRDRDRDPRDRERDRDRDRERERGWDMRDRERDRERERYGAPS
SYPPPPMPSNGGSPYGHHSHAHGYHASHGGHGHGYGAGGGGHSYDYRR
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggcaggatggctcttccgccgcccgctcctctccgaagcgggagtcgtcgccc
ctcgaaagcctcgagtcgagcgacgacgatcactcgcagcagcagcggttcgccaatgcg
gtaaagtccggggaccgatcgcccgcgtcgccgtcgtcttcgaagcagtccgcctcgcgc
gcttcgtcttcgtcgccagcgccgcgggccgcagcgatttccggggcgggatcgctcaag
gagagctcgccggccgcccagtcgagccactcttcgtcgcgggcgccgttcaagctcaag
agccactttgccgaggccgaggcggacccggacctctacggcctccgacgctccggccgg
gcgcccaagaagcagtacatcgacggcagcgagtccgaggacggcggctccagcagcgtg
ggtgcgcgtaggagggcggccaaggcctcttcgaggcgcagctcggccaggatatcagac
gacgacgatgatgatggtgccgatgcggcgagagacgccgccgacgacgacgacgatgac
gaggatgacgacgccgatgacgacgaggacgatgacggcgacttccgggcgtcgtcgtcc
aagggcaacaaggcctcgtcgtcgtcgcgcaggggcaagccggccaagaagttgtcgtct
aaagcgtcgaagaaggccaaggcgtttgggggttcggctgcgaggctgtcgtcggccgac
ctggaggcgtcgcgggtgtcgagccgcaacggcaagcgcatccccaactacaccgaggac
tacgccgacctcagcgacgatgatccgttcgaggacgaggcggaccggcgggcgcagcag
tgggcggccgaggccggcgccgccgaagaggaggaggacgtgatcgaagccatcatcggc
cacgagcgcgacgaggcgcacctcgacgaccccgaggacgtgccgaccgagaacatgcgc
ttcgtcgtcaagtggaagggctactcgcacctccacgatacccaggagctgtacgagttc
ctcaagcgcttcaagggcttcaagcgcgtcgacaactacatcaagcacgtcttcctccgc
gagcgggcgctgatgaccgaccccaacgcgtcgcgcgaggacatcgagacgctgcagatt
gaaaaggagcgccagcgcgaggccatcgagagctacaagaccgtcgagcgcgtcgtggca
cagcgcgacaatccgcccaacaaggacgtgccctacccgcacctcgccttcctgtgcaag
tggaagggactcgcctacgccgactgcacctgggagcccgaggaggagatcaagcagatc
ggcaagcccgccatcgaccgctacctcgagcggaccacgtcgggcatggtgccctggcgc
agcgaaaacttttccaagggcaggcccaagtacaagcgcatgaccgagcagcccgcctac
atcaccccgggcggcaccctcaaggacttccagatgacgggcctcaactggctcgcctac
ctctggtccaagaacgagaacggcatcctggcagacgagatgggcctcggcaagacggtg
cagacggtggccttcctgtcgtacctggtgcactcgtgctaccagtacggcccgttcctg
gtcgtggtgccgctttcgacgctgccggcgtggatgaaccagttcgaggtgtgggcgccc
gacctcaacgtcatcgcctacatgggcaacagcgccagccgtcagatgatccgcgactac
gagttcttccagggctccgggtcgggagccggcggagggcgggccaaggtcaagttcaac
gtgctcgtcaccacctatgagttcatcctcaaggacaagaccgagctgcagcaggtcaag
tggcagtacctcgccgtcgacgaggcgcaccggctcaagaactccgagtcgcagctctac
gacgccctcaagagcttcaatgccgccggcaagctcctcatcacgggaacaccgctgcag
aacaacgtcaaggagctcatcgcgctgctccacttcctccgccccgaccagttcgacctc
gacctcgactttgacctcaacgacgtcgaccagggcatgatcaaggacctccacgagaag
cttgacaacgtcatgctgcgccgcctcaagcgcgacgtggtcaaggagatgccgaccaag
tcggaaaagatcctccgcgtcgagatgtcggcgatgcagcagcgcatgtacaaggccatc
ctgacgcgcaactactcgctgctgagcggcgccacaacggcccagttctcgctgctcaac
atcgccatcgagctcaaaaaggcgtccaaccacccctacctcttcgacggcaccgaggcc
atctcggacaaccgcgaagagacgctgcgcggcctcgtcatgcacagcggcaagatggtg
ctgctcgacaagctgctggcgcgcctcaaggccgacggccaccgcgtcctcatcttcagc
cagatggtccgcatgctcgacatcctctctgactacatgtcgctgcgcggctacatccac
cagcgccttgacggcaccatttcgtccgaggtgcgcaaaaaggccatcgagcacttcaac
gccgaggggtcgcccgactttgccttcctcctctcgacgcgcgccggcggcctcggcatc
aacctcgagacggccgacaccgtcatcatctttgactcggactggaacccgcagaacgat
ctgcaggccatggcgcgcgcccaccgcctcaactccaagttccacgtcagcgtcttccgc
ttcctcaccaaggacacggtcgaggaggacgtgctggagcgtgccaagaagaaaatggtg
ctcgagtacgccatcatcaaccagatggacacgtccggcacgaactttgcgcccaagtcg
ggcgccaagaacaccacgcagttcagcaaggaggagctcggcgccatcctcaagtttggc
gcccagaacatgttcaagagcgacaacgacgacggccagcagaagaagctcgacgagatg
gacctagacgacatcctctcgcacgccgaggcacacgagactgaggtcgacccgacgggc
agctcggccggcggtcagggcttcctccagtcgtttgcccaggtgcaggacttcaaggcc
gacgtcagctgggacgacatcatcccgctcgaggatcgcctcaaggccgaggaagaggag
cgccagaaggccgtcgaggaggcggcggcgctcagctcgnnnnnnnnnnnnnnnnnnnnn
nnnnnnnncagtggcgcgtcggcgctcaagcgccagcgcaagacggcggcccagcgctcg
gtcgagctcaaggagcgcgacctgcgcgtcctgatccgcggcatccagcgctggggcgac
atccgctaccgcggcgaccccatcatccgcgagggcaagctgcacgacaagaaccgccag
gtgctcatccagatctccgacgagctggtgcgcctgtgcgaggaggccgtcgctgagcac
gccgccttcatgaagggcaagcaagagcgcggcgaagagatctcgtcggcgctccgtcag
aaggcggtgctcgtcacgtgccgtggcatcacgggcatcaacgccgacacggtgctggtg
cgccactacgacctccgcctgctcgccgagacgctcgacaatgtcgccgacccgctccag
tggcgcatgcccgtcgagcacctcaaggccacgctcaactgggccggcggatggagcaac
gtcgacgatgccatgctcctcgtcggcatctggaagtatggcttcggcgcctgggagcag
atcgaggccgacgaggactttgacctcaagggcaagtttttcctcgaggagggcaagaag
gccggccaagactcgcacgccgccgacaaggatgcgccgcccagcggcacctctgggccg
ccgcagggcaaggcgcggccgatccccaacgccatccacctcgtgaggcgcggcgactac
ctgctcaaggtcctgcgcgagcacgacaacagcatcaagggcatcggcgagggagcacaa
ccgcaggctgtcaagcacagcatcggcggcggcggcggcggcggcggcggcggcggcgga
tcgtcacgcaaaaaggtccgccgcagtgcctctcccagcaacgcttcgccaacgcccgcc
ggtggcaaggggcccgggcgctcgtcggcggcggcggccaaggctggcggcaaccggccc
acgcccgtctactcgtccgactcgtccgacgaggcccactcgagcatggacgaggccgag
tgcaaggagctgatgcggccgtgcaagcggcagctcaagcgcctgcgcgacggcaccgac
cacctcgaccgcgaccagaaggtggccacgctcaaggagtgcctctcggccatcggcggc
cacattgacgcactgctcgagggcaagtttgccgcactgccggcaaaggagcgcgaaaag
tggttcaaccacctctgggcgttttccgcctttttctggcccaagaaggtcaagccgtcg
aagctgcgcgccatcttcgacaagctcgtcggcaacggcggcaacggcggcggcggtgga
agcgccccaccggcagcgactgcggcggcagcaacgacaccggccacgccagcggctgca
gctcccacggccgcctccgcgacccccgcggccgaaggcgccacggcagcaggtgcggcg
acctcggcagcgacgcccagcacgccggccgccgccgcgagcaccgccaacacgaccacc
accgccgacgcccgtgctgccacgccctcgtccaccacgggcgccaacggccacgcctcg
gagagcatcaagcgcaaggcgtccggcagcggcggtaccccgctccccgacggtccgatc
ccaaagaaggctcgcacctcggacgcccatccgccccacgcccagcgaccgggcggggcg
ccctactctcccagcccgagcgccgcctcgaccggcctgccccacgccagcggctatgcc
cctgccggctcggcagccgcagcgagcgatcgcggaggctcgagggagagcggtggctac
cgcgaccacagcagggaccacccgcgcgaccgggaccgcgagcgcgatcgggatcgcgac
cgtgatcgcgacccgagggatcgagagcgcgaccgtgaccgcgaccgcgagcgtgagcgg
ggatgggacatgcgggatcgcgagcgcgaccgcgagagggaacggtacggcgcgccgtcg
agctacccaccgcccccgatgccgagcaacggcggcagcccgtacggccaccactcgcac
gcgcatggctatcatgcctcgcacggcggccatggccatggctacggcgccggtggaggc
ggccacagctacgactaccgaaggtag
DBGET
integrated database retrieval system