KEGG   Pseudozyma flocculosa: PFL1_03225
Entry
PFL1_03225        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PFL1_03225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfp03041]
    PFL1_03225
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_03225
Spliceosome [BR:pfp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PFL1_03225
 Complex B
    PFL1_03225
 Complex C
   U2 SnRNP specific factors
    PFL1_03225
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PFL1_03225
SSDB
Motif
Pfam: SF3b1 TOR1L1_N PPP2R1A-like_HEAT HEAT_EZ HEAT_ECM29 HEAT_EF3_N HEAT_2 HEAT XMAP215_CLASP_TOG Adaptin_N Htt_N-HEAT_1 RRP12_HEAT mTOR_dom Dopey_N LIDHydrolase IFRD Borrelia_P83
Other DBs
NCBI-GeneID: 19317335
NCBI-ProteinID: XP_007878931
UniProt: A0A061HBQ4
LinkDB
Position
Unknown
AA seq 1224 aa
MADEADEIRRLQEARKAATEGKIALGKAGGYDQDIYGGAKRSDYVRELPVDVGSSRAGGR
SGNGSDDDDGDDDDDDEGGRGGRRANPLDAYSAPQHLLHEFADDDEDPLQGRAESRQTAA
RQSDYHLRRFNRDVNEEAASDPFAKDGGGEGGYKEAMRRAELEREEERVRRIIEAKEKEA
KEQQQNGKALDDDAKPIGSAAPDATPRVARKRRWDVAAPEAAGTTEQSTTAATTATQAGT
EADGWTGEAPAKKRRSRWDETPVAGGAAPGETPKPTDGLANGAATSAAGGDDGAPSMVEF
RDPRNRYMSDEELDSILPSEGYKIVEPPADYAPIRTPARKLMQTPAPLDGGGFTMQDENA
ARAGLEELIPELPTDIPGVGQLAFFKSEDQTFFKKILHEEDEATLSSDEVKERKIMRLLL
RIKNGTPSTRKTALRTITDRAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRILYK
LDDLVRPYVHRILVVIEPLLIDEDYYARVEGREIISNLSKAAGLAHMISTMRPDIDHVDE
YVRNTTARAFSVVASALGIPALLPFLKAVCRSKKSWQARHTGIRIVQQIAIMMGCAVLPH
LKSLVDCVERGLEDEQQKVKTMTALALAALAEAAAPYGIESFENVLKPLWLGIRQHRGKG
LAAFLKAIGFIIPLMDSDSTLYFVKEVTPTLIREFQSADEEMKKIVLKVVKQCAATEGVT
GAFLRDEMLPEYFKNFWVRRMALDRRNYRQVVETTVELAQKTGVAEIVGRIVNELKDESE
PFRKMVMETIQKVVASLGAADIDERLEVQLIDGLIYAFQEQTVEDQVMLDGVGTVVNALG
MRVKPYLTQIVSTILWRLNNKNAKTRQQAADLTTKLAVVIKQCGEDALLSKLGVVLFEQL
GEEFPEALAAIISAETAIANVVGMTAMSPPIKDLLPRMTPILRNRHEKVQEASINLIGRI
ADNGSEFVSPREWMRICFELLDLLKAHKKAIRRAAVNSFGYIARAIGPSDVLQVLLTNLR
VQERQSRVCSTVAIAIVAETCGPFTTLPAILNEYRTPELNVRNGCLKALSWVFEYIGEMS
KDYVYSVIGCLDDALTDRDQVHRQTAASIVKHLALGTAGLGHEESMQHLLNLVWPNIFET
SPHVLGSVMSAIESLEVALGPGVLLHHTLQGLFHPARKVREVYVRLYNTTYLRSQDALVA
FYPDLSEFSDDRNDYRRHELYTFI
NT seq 3675 nt   +upstreamnt  +downstreamnt
atggccgacgaagccgacgagatcaggcgattgcaggaggctcgcaaggccgccacagag
ggcaagatcgccctcggcaaggccggaggctacgaccaggatatctatggcggcgccaag
aggagcgactacgtccgcgaactgcccgtagatgtcggcagctcccgcgccggcggacgc
tccggcaacggttcggacgacgacgacggtgatgacgacgacgatgatgagggaggtcgc
ggtggaaggcgtgccaatcctctggacgcctattcggcgccacagcacctgctgcacgag
tttgccgacgacgacgaggacccgctgcagggccgcgccgagtcccggcagactgcggca
cgacagagcgactaccacctccgccgcttcaaccgcgatgtcaacgaggaggcggcgtcc
gacccctttgccaaggatggcggcggcgagggcggatacaaggaggcgatgcggcgggcg
gagctcgagcgggaagaggagcgggtcaggaggatcatcgaggccaaggaaaaggaggcc
aaggagcagcagcagaacggcaaggcgctcgacgacgacgccaagcccatcggctcggcc
gctcccgatgcgacgccacgggtggcgaggaagcgcaggtgggacgtcgccgcaccggaa
gcggcggggaccacggagcagtccaccaccgccgccaccaccgccacgcaggcggggaca
gaggcggatggatggaccggcgaggcgcccgccaagaagcgcaggtcgcgctgggacgag
acgcccgtcgccggcggcgctgcgcctggcgagacaccgaagcccaccgacggcctggcc
aacggtgcggccacctctgcggccggaggcgacgatggtgcaccgagcatggtcgaattc
agggacccgaggaaccggtacatgtccgacgaggagctcgactcgatcctgccgtccgag
ggttacaagattgtcgagccgccggccgactacgcgcccatccggacgccggcgcgcaag
ctgatgcagacgcccgcgcccctcgacggcggcggcttcacgatgcaggacgagaacgcc
gcccgcgccggcctcgaggagctcatcccggagctgcccaccgacatcccgggcgtgggc
cagctggccttcttcaagtccgaggaccagacgttcttcaaaaagatcctgcacgaggag
gacgaggcgacgctgtcgagcgacgaggtcaaggagcgcaagatcatgcgcctgctgctg
cgcatcaagaacggcacgccctcgacgcgcaagacggcgctgcgcaccatcaccgaccgc
gcgcgcgagtttggcgccggcccgctgtttgacaagatcctgccgctgctcatggagcgc
accctcgaggaccaggagcgccacctgctcgtcaaggtcattgaccgcatcctgtacaag
ctcgacgacctggtgcgcccctatgtccaccggatcctcgtcgtcatcgagcctctgctg
atcgacgaggactactacgcccgcgtcgagggccgcgagattatcagcaacctgtccaag
gccgccggcctggcccacatgatcagcacgatgcgccccgacattgaccacgtcgacgag
tacgtccgcaacacgacggcgcgcgccttttcggtcgtcgcgtcggcgctcggcatcccg
gcgctgctgccgttcctcaaggccgtgtgccgctccaagaagagctggcaggcgcggcac
acgggcatccggatcgtgcagcagattgccatcatgatgggctgcgcggtgctgccgcac
ctcaagagcctggtcgactgcgtcgagagggggctcgaggacgagcagcaaaaggtcaag
acgatgacggcgctggcgctggcggcgctcgccgaggcggcggcgccctacggcatcgag
agcttcgaaaacgtgctcaagcccctgtggctcggcatccgccagcaccgcggcaagggc
ctggcggcgttcctcaaggccatcggcttcatcatcccgctgatggactcggacagcacg
ctctactttgtcaaggaggtgacgccgacgctgatccgcgagttccagagcgccgacgag
gagatgaagaagattgtgctcaaggtggtgaagcagtgcgccgccaccgagggcgtgacg
ggcgcgttcctgcgcgacgagatgctgcccgagtacttcaaaaacttctgggtgcggcgg
atggcgctggaccggcgcaactaccgccaggtggtcgagacgaccgtcgagctggcgcag
aagacgggcgtggccgagattgtggggcggatcgtcaacgagctcaaggacgagagcgag
cccttccgcaagatggtcatggagacgatccaaaaggtggtggccagcctgggcgcggcc
gacatcgacgagcggctcgaggtgcagctgatcgacgggctgatctacgcgttccaggag
cagacggtcgaggaccaggtgatgctcgacggcgtcggcaccgtcgtcaacgcgctgggc
atgcgcgtcaagccgtacctgacccagattgtgtcgacgatcctgtggcgcctcaacaac
aagaacgccaagacgcggcagcaggcggccgacctgacgacgaagctggccgtcgtcatc
aagcagtgcggcgaggacgcgctgctgtccaagctgggcgtggtgctgtttgagcagctg
ggcgaggagttccccgaggcgctggcggccatcatcagcgccgagacggccatcgccaac
gtggtcggcatgacggccatgagcccgccgatcaaggacctgctgccgcggatgacgccc
atcctgcgcaaccggcacgaaaaggtgcaggaggcgagcatcaacctcatcgggcggatc
gccgacaacgggagcgagtttgtcagcccgcgcgagtggatgcgcatctgctttgagctg
ctcgacctgctcaaggcgcacaagaaggccatccggcgggcggccgtcaacagctttggc
tacattgcgcgcgccattgggccgtcggacgtgctccaggtgctgctgaccaacctgcgc
gtccaggagcgccagtcgcgcgtgtgctcgacggtggccatcgccattgtggccgagacg
tgcgggccgtttacgacgctgccggccatcctcaacgagtaccgcacgccggagctcaac
gtgcgcaacggctgcctcaaggcgctcagctgggtcttcgagtacattggcgagatgagc
aaggactacgtgtacagcgtcattgggtgcctcgacgacgcgctgaccgaccgggaccag
gtgcaccggcagacggcggcgagcatcgtcaagcaccttgcgctgggcacggccgggctg
ggccacgaggagagcatgcagcacctgctcaacctggtgtggcccaacatctttgagacc
agcccgcacgtgctgggctcggtcatgtcggcgattgagagcctcgaggtggcgctgggc
cccggggtgctgctccaccacacgctccagggcctcttccacccggcgcgcaaggtgcgc
gaggtctacgtgcgcctctacaacacgacctacctgcgctcccaggacgccctcgtcgcc
ttctacccggacctctcggagttttcagacgaccgcaacgactaccgccgccacgagctc
tacacgttcatctga

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