Pseudozyma flocculosa: PFL1_03245 Help Entry PFL1_03245        CDS       T03141                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pfp  Pseudozyma flocculosa Pathway pfp03020   RNA polymerase pfp03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pfp00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PFL1_03245   09124 Replication and repair    03420 Nucleotide excision repair     PFL1_03245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pfp03021]     PFL1_03245    03400 DNA repair and recombination proteins [BR:pfp03400]     PFL1_03245 Enzymes [BR:pfp01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PFL1_03245 Transcription machinery [BR:pfp03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PFL1_03245 DNA repair and recombination proteins [BR:pfp03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PFL1_03245 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP Motif Other DBs NCBI-GeneID:  19317355 NCBI-ProteinID:  XP_007878953 UniProt:  A0A061HA98 LinkDB All DBs Position Unknown AA seq 1250 aa AA seqDB search MAQVASYDSYVKDTISQGGGGGAGFDDAYKSDYDGAAAGVDDYGYGKAAYYGADDDADVE EISQEDCWDVIRSFFEEKGLVRQQLDSFNEFMSNTIQELVEEVRSLTLEQSDQHSGHAED KTRRYEIEFGQIYLNKPTQTESDGSSAQLFPQEARLRNLTYSASLFVDVSQKLLIQSDDD VDQNGDPLWVPEHGRDGVEEQQIFIGKVPIMLKSDFCWLRGLDDETSFSLNECPYDSGGY FVINGSEKVLIAQERMAANHVYVFSKAPPAPVTFLAEIRSAVEKGGKTISTMQIKLFSRN KEKTQNNTIRATLPYIRNDIPIVIVFRALGIVPDREVLQHICYDFNDTAMLEMLKPCIEE AFVIQDRDLALDFIGRRGTTTGLSRAKRTVYAQEILQKEMLPHVSTAEGSNTRKAYFFGY MVHRLLLAALERREIDDRDHFGKKRLDLAGPLMASLFRMLFRKLTRDIYRHLQRCVEEHK EFHIQAAVKSSTITNGLRYSLATGNWGDQKKFMQAKAGVSQVLNRYTFASTLSHLRRCNT PIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMSNISVGTPSAPIVEFLEE FGLDSLVDMQVTNARATKVFVNGVWMGTHDDPGQLVDTLRDLRRKDDISHEVSVVRDIRE KELRLYTDAGRVLRPLFIVNPDDMTLLIKKHHVAMLGQTTELGEEFRWTQLVQQGVIEYL DAEEEETVMICMSPDDLEQSREYKARNGQVPAASADPSARLRSPHTFAPDTWTHCEIHPS MILGVCASIIPFPDHNQSPRNCYQSAMGKQAMGVYLTNYQMRMDTMANILYYPQKPLATT RAMEHLRFRELPAGQNAIVAILCYSGYNQEDSVIMNQSSIDRGLFRSLYYRSYMAEEKKV GVMIMEEFEKPSRDTTIRLKHGTYDKIDADGMVPPGTRVSGDDVIIGKTAPLPPDSEELG LRSKTHTKKDVSVSLKSTENGIIDQVLMTTNASGNKFVKVRVRSTRVPQTGDKFASRHGQ KGTIGITYRQEDMPFTSEGVTPDIIINPHAIPSRMTIGHLVECLLSKVATLSGQEGDATP FTELTVEAVSSILRGLGYQSRGLEVMYNGHTGRKLAAQVYLGPTYYQRLKHMVDDKIHSR ARGPVQILTRQPVEGRSRGGGLRFGEMERDCMIAHGIASFLKERMFDASDAYRLHVCDIC GLTAVANLKKSTFECRSCRNRTSISQVYIPYAAKLLFQELMAMGVCTRLY NT seq 3753 nt NT seq  +upstreamnt  +downstreamnt atggcccaagtcgcctcctatgacagctacgtcaaggacaccatcagccaaggcggcggg ggcggcgccggcttcgacgatgcctacaagtccgactacgacggcgctgccgccggtgtc gacgactacggctacggcaaggcggcctactacggcgcagacgacgacgcagacgtagag gagatcagccaggaggactgctgggacgtcatccgctcctttttcgaggaaaagggcctc gtccgccagcagctcgactcgttcaacgagtttatgagcaacacgatccaggagctcgtc gaagaggtgcgcagcctcaccctcgagcagtccgaccagcactcgggccacgcagaggac aagactcgccgctacgagatcgagtttggccagatctacctcaacaagcccacccagacc gagtccgacggcagctcggcccagctcttcccccaggaggcgcgcctgcgcaacctcacc tactcggcctcgctctttgtcgacgtcagccagaagctcctcatccagagcgacgacgac gtcgaccagaacggcgacccgctctgggtgcccgagcacggccgcgacggcgtcgaggag cagcagatctttatcggaaaggtgcccatcatgctcaagtccgacttctgctggctccgc ggcctcgacgacgagacgtcgttctcgctcaacgagtgcccctacgactcgggcggctac tttgtcatcaacggctccgaaaaggtgctcatcgcccaggagcgcatggccgccaaccac gtctacgtcttctccaaggctccgcccgcccccgtcaccttcctcgcagagatccgcagc gccgtggaaaagggcggaaagacgatcagcaccatgcagatcaagctcttttcgcgcaac aaggaaaagacgcagaacaacaccatccgcgccacgctgccctacatccgcaacgacatc cccattgtcatcgtcttccgcgccctcggcatcgtgccggaccgcgaggtgctccagcac atctgctacgacttcaacgacacggccatgctcgagatgctcaagccgtgcatcgaggag gcctttgtcatccaggaccgcgacctcgccctcgactttatcgggcggcgcggcaccacg acgggcctcagccgcgccaagcgcaccgtctacgcccaggagatcctgcaaaaggagatg ctgccccacgtctcgaccgccgagggctccaacacccgcaaggcctacttcttcggctac atggtccaccgcctcctcctcgccgccctcgagcgccgcgagatcgacgaccgcgaccac tttggcaagaagcgcctcgacctcgccggcccgctcatggccagcctcttccgcatgctc ttccgcaagctgacgcgcgacatctaccgccatctgcagcgctgcgtcgaggagcacaag gaattccacatccaggccgccgtcaagtcgagcaccatcaccaacggcctccgctactcg ctcgccacgggcaactggggcgaccagaagaagttcatgcaggccaaggcgggcgtgtcg caggtgctcaaccgctacacgtttgcctcgaccctctcgcacctccggcgctgcaacacg cccatcggccgcgacggcaagattgccaagccgcgccagctccacaacacccactggggc atggtctgccccgccgagacgcccgagggccaggcgtgcggcctggtcaagaacctgtcg ctcatgtccaacatctcggtcggcacgccgtcggcgcccatcgtcgagttcctcgaggag tttggcctcgacagcctcgtcgacatgcaggtcaccaacgcgcgcgccacaaaggtgttt gtcaacggcgtctggatgggcacccacgacgacccgggccagctggtcgacacgctgcgc gacctgcgccgcaaggacgacatcagccacgaggtcagcgtcgtgcgcgacatccgcgaa aaggagctccgcctctacaccgacgccggccgcgtgctgcgcccgctctttatcgtcaac ccggacgacatgacgctgctgatcaagaagcaccacgtcgccatgctgggccagacgacg gagctgggcgaggagttccgctggacgcagctggtgcagcagggcgtcatcgagtacctc gacgccgaggaggaggagacggtcatgatctgcatgagccccgacgacctcgagcagtcg cgcgagtacaaggcgcgcaacggccaggtgcccgccgccagcgccgacccgagcgcccgg ctgcgctcgccccacacgtttgcgcccgacacgtggacccactgcgagatccacccgtcg atgatcctcggcgtctgcgcgtccatcatccccttcccggaccacaaccagtcgccgcga aactgctaccagtcggccatgggcaagcaggcgatgggcgtctacctgacaaactaccag atgcgcatggacacgatggccaacatcctctactacccgcagaagccgctggcgacgacg cgcgccatggagcacctgcgcttccgcgagctgccggcgggccagaacgccatcgtcgcc atcctctgctactcgggctacaaccaggaggactcggtcatcatgaaccagtcgtcgatc gaccgcggcctcttccgcagcctctactaccgctcctacatggccgaggagaaaaaggtg ggcgtcatgatcatggaggagtttgagaagccgtcgcgcgacacgacgatccggctcaag cacggcacctacgacaagattgacgccgacggcatggtgccccccggcacccgcgtctcg ggcgacgacgtcatcattggcaagacggcgccgctgccgcccgacagcgaggagctgggc ctgcgcagcaagacgcacacgaaaaaggacgtcagcgtgtcgctcaagtcgaccgagaac ggcatcatcgaccaggtcctcatgacgaccaacgccagcggcaacaagtttgtcaaggtg cgcgtccgctcgacgcgcgtgccccagacgggcgacaagtttgcgtcgcgccacggccag aagggcaccatcggcatcacgtaccgccaggaagacatgccgttcacgagcgagggcgtt acgccggacatcatcatcaacccgcacgccatcccgtcgcgcatgaccatcggccacctg gtcgagtgcctgctgtcgaaggtggccacgctgtcgggccaggagggcgacgcgacgccc tttaccgagctcaccgtcgaggccgtgtcgtcgatcctgcgcgggctgggctaccagtcg cgcggcctcgaggtcatgtacaacggccacacgggccgcaagctggcggcgcaggtctac ctggggcccacctactaccagcggctcaagcacatggtcgacgacaagatccacagccgt gctcgcgggcccgtccagatcctgacgcgccagcccgtcgagggtcggtcgcgcggcggc ggcctccgcttcggcgagatggagcgcgactgcatgattgcgcacggcatcgccagcttc ctcaaggagcgcatgtttgacgcctcagacgcctaccggctgcacgtgtgcgacatctgc ggactgacggcggtggccaacctcaagaagagcacgtttgagtgccgctcgtgccgcaac cgcacgtcgatctcgcaggtctacattccctacgcggccaagctgctcttccaggagctc atggccatgggtgtctgcacccggctctactag

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