KEGG   Pseudozyma flocculosa: PFL1_03308
Entry
PFL1_03308        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10981  DNA polymerase IV [EC:2.7.7.7]
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PFL1_03308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_03308
Enzymes [BR:pfp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFL1_03308
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     PFL1_03308
SSDB
Motif
Pfam: DNA_pol_B_thumb DNA_pol_B_palm HHH_8 DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 19317418
NCBI-ProteinID: XP_007879016
UniProt: A0A061H8U8
LinkDB
Position
Unknown
AA seq 528 aa
MSSSSAPRSFSPSTADAPSLAPLTFQDRIGVPLHATRHSSRVLSQSTRIHILNDKLTDDQ
ARQLGHLVVHLGGQLTSTPSAANIIITALTAPKRIAKHIHPDDAASKFLVSPQWLHHVQR
TGLLVDPDEYAVTRRSGTKRALDDHQTESAQHSKRPRLDSDTLLDGHNATDTPSGPSQAD
SERPFPWQNTKFACKRPSPLKCINQALVDELEVIHAERRLTGDSYSEMAYMRALSAIKAY
PRSLANAPSQADKIKGVGKKVALLVHQFFTEGRIVEAKIIRRDPAIATIKSFTELYGIGP
VGAREAYNEGCRSFADVLGKGRSLATALSVSESLRILPDLRRPIPRHECESITEMIMTML
DAILPGCVHTICGGYRRGKAQSYDLDIVVGHPRASRAVLHSLFDKMKRQGLVSHVVSIST
PQDDEATDVHVDVAHLVVVPPNSGGLHRRVDLVFAPETVYGAAVLGYTGSIVFERDIRVW
CRSRGYKFSFTGVTRLADNVVVDTPTEESVFELFGLPFMPPRWRNCDA
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgtcgtcctcctctgccccgcgctcattctcgccttccacggccgacgcacccagcctg
gccccgctcaccttccaggaccgcatcggcgtacccctccacgcgacaaggcactcttcc
cgcgtcctctcccagtcgacccgcatccacatcctcaacgacaagctcaccgacgaccaa
gcacgccagcttggccacctcgtcgtacacctcggaggacaactcacctcgacaccgagc
gcggccaacatcatcatcactgcgctcactgcgccgaaacgcatcgcaaagcacatacac
ccagacgatgccgcttcaaaattcctcgtcagcccgcaatggctccaccacgtccagcgc
accggcctcctcgtcgatccagacgagtatgccgtcacacgaaggtcaggcacaaagaga
gcactggacgaccaccagactgaatcggcccagcattcaaagaggcctagactcgacagc
gacaccctactagatggccacaacgccaccgacacgccgagcggcccatcgcaagcagac
agcgagcgcccgttcccctggcagaatacaaagttcgcctgcaagaggccgtcgcccctc
aagtgcatcaaccaggcgctcgtcgacgagctcgaagtcatccacgcagagcgacgcctc
accggcgactcgtactcggagatggcctacatgcgcgccctctcggccatcaaggcctac
ccgcgctccctcgcaaacgccccctcgcaggccgacaagattaagggcgtcggcaaaaag
gtcgccctgctcgtccaccagtttttcaccgagggccgcatcgttgaagccaagattatc
cgccgcgaccccgccatcgccaccatcaagagtttcactgagctgtacggtatcgggccg
gtgggagcgcgagaggcgtacaacgagggatgccgctcctttgcggatgttctgggcaag
ggccgaagccttgctacggctctgagcgtttcagagagccttcgaattctcccggatctg
aggcgccccatcccgcgacacgagtgcgagtccatcacagaaatgatcatgacgatgctc
gacgcaatcctgcccggctgtgtgcacaccatctgtggcggctaccggcgcggaaaggcg
cagagctacgacctcgacattgtcgtcggccacccgcgggccagtcgggccgttctgcat
tcgctctttgacaagatgaaacgacagggcctcgtatcgcacgtcgttagcatctcgacg
ccgcaggacgacgaggcgactgacgtgcatgtcgatgtggcccacctcgtcgtcgtaccg
cccaacagcggcgggttgcatcgccgggtcgatctggtctttgcgccagagaccgtctac
ggcgcagcggtgctgggctatacgggctcaatcgtgtttgagcgcgatatccgcgtgtgg
tgccgcagtcgaggctacaagttctcgttcacgggcgtgacgaggttggcagataacgtc
gtggtcgatacgcccactgaggagtcggtctttgagctgttcggcttgcccttcatgccg
ccgaggtggagaaactgcgatgcctga

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