Pseudozyma flocculosa: PFL1_03308
Help
Entry
PFL1_03308 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PFL1_03308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_03308
Enzymes [BR:
pfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFL1_03308
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
PFL1_03308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
19317418
NCBI-ProteinID:
XP_007879016
UniProt:
A0A061H8U8
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MSSSSAPRSFSPSTADAPSLAPLTFQDRIGVPLHATRHSSRVLSQSTRIHILNDKLTDDQ
ARQLGHLVVHLGGQLTSTPSAANIIITALTAPKRIAKHIHPDDAASKFLVSPQWLHHVQR
TGLLVDPDEYAVTRRSGTKRALDDHQTESAQHSKRPRLDSDTLLDGHNATDTPSGPSQAD
SERPFPWQNTKFACKRPSPLKCINQALVDELEVIHAERRLTGDSYSEMAYMRALSAIKAY
PRSLANAPSQADKIKGVGKKVALLVHQFFTEGRIVEAKIIRRDPAIATIKSFTELYGIGP
VGAREAYNEGCRSFADVLGKGRSLATALSVSESLRILPDLRRPIPRHECESITEMIMTML
DAILPGCVHTICGGYRRGKAQSYDLDIVVGHPRASRAVLHSLFDKMKRQGLVSHVVSIST
PQDDEATDVHVDVAHLVVVPPNSGGLHRRVDLVFAPETVYGAAVLGYTGSIVFERDIRVW
CRSRGYKFSFTGVTRLADNVVVDTPTEESVFELFGLPFMPPRWRNCDA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcctctgccccgcgctcattctcgccttccacggccgacgcacccagcctg
gccccgctcaccttccaggaccgcatcggcgtacccctccacgcgacaaggcactcttcc
cgcgtcctctcccagtcgacccgcatccacatcctcaacgacaagctcaccgacgaccaa
gcacgccagcttggccacctcgtcgtacacctcggaggacaactcacctcgacaccgagc
gcggccaacatcatcatcactgcgctcactgcgccgaaacgcatcgcaaagcacatacac
ccagacgatgccgcttcaaaattcctcgtcagcccgcaatggctccaccacgtccagcgc
accggcctcctcgtcgatccagacgagtatgccgtcacacgaaggtcaggcacaaagaga
gcactggacgaccaccagactgaatcggcccagcattcaaagaggcctagactcgacagc
gacaccctactagatggccacaacgccaccgacacgccgagcggcccatcgcaagcagac
agcgagcgcccgttcccctggcagaatacaaagttcgcctgcaagaggccgtcgcccctc
aagtgcatcaaccaggcgctcgtcgacgagctcgaagtcatccacgcagagcgacgcctc
accggcgactcgtactcggagatggcctacatgcgcgccctctcggccatcaaggcctac
ccgcgctccctcgcaaacgccccctcgcaggccgacaagattaagggcgtcggcaaaaag
gtcgccctgctcgtccaccagtttttcaccgagggccgcatcgttgaagccaagattatc
cgccgcgaccccgccatcgccaccatcaagagtttcactgagctgtacggtatcgggccg
gtgggagcgcgagaggcgtacaacgagggatgccgctcctttgcggatgttctgggcaag
ggccgaagccttgctacggctctgagcgtttcagagagccttcgaattctcccggatctg
aggcgccccatcccgcgacacgagtgcgagtccatcacagaaatgatcatgacgatgctc
gacgcaatcctgcccggctgtgtgcacaccatctgtggcggctaccggcgcggaaaggcg
cagagctacgacctcgacattgtcgtcggccacccgcgggccagtcgggccgttctgcat
tcgctctttgacaagatgaaacgacagggcctcgtatcgcacgtcgttagcatctcgacg
ccgcaggacgacgaggcgactgacgtgcatgtcgatgtggcccacctcgtcgtcgtaccg
cccaacagcggcgggttgcatcgccgggtcgatctggtctttgcgccagagaccgtctac
ggcgcagcggtgctgggctatacgggctcaatcgtgtttgagcgcgatatccgcgtgtgg
tgccgcagtcgaggctacaagttctcgttcacgggcgtgacgaggttggcagataacgtc
gtggtcgatacgcccactgaggagtcggtctttgagctgttcggcttgcccttcatgccg
ccgaggtggagaaactgcgatgcctga
DBGET
integrated database retrieval system