Pseudozyma flocculosa: PFL1_03394
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Entry
PFL1_03394 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PFL1_03394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfp04131
]
PFL1_03394
Membrane trafficking [BR:
pfp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
PFL1_03394
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
PFL1_03394
RAVE complex
PFL1_03394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
Beta-prop_EML_2
TPR_GEMI5
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
19317504
NCBI-ProteinID:
XP_007879102
UniProt:
A0A061HAQ5
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MSDPTPLLRRSWTCLGQPSALRPASPGPQVPSQCSVPLSVSAALLHATAFSRGLDQRDVV
TALASSDQVCLLSRDRDFVQALPFWQAFSASEETERAVTCVCVGVDPGARQTLVAAAMDH
RIAIWAASNSTTRKWKVHSTVMVNDGPVTSIDLHAEMLVIGTATSISLWQLGQSGISIWR
RTWSRPSPAPIRLARFSPEGSSIAAATEGGQNILLWSLPHSAASAGASGEKGIPSLTQRI
FHPFPVSSFVWRHPPDPSSQSDVLVSSCADGVTRVWAAVIDEPAKLRLWATLDSTSDVGK
RLAELRRASTTATIEPVPFYLEAHVVANALRANIGALEKELQMMELGLGDSEGEDDHSAQ
GKRRDTEMETDIKRTRLRRLQQLLSDAPDLFVKLEEDGFLTVLAVANIDRKPPTLLQTLT
VLKAPIRLPLKTADVLDVALLPRYAGNGASSEDAFAVLQIRSTSGAAVAVDLNPALFFDG
RGIGLSHQGEDLASFPFAASDNVARVDTRSPVIAHCSRIARLDRSADGRFLASASSTETI
VWDGEAGSHQRLGKGRAVMRPSSGPYDGKSKQAAISDDGLLHARICGNELCVVAPHLLAE
SASCTSALPEDVEVLRFARIGEVQHLVACAKDGASRVWKVQMGDSLNVDAVARPRIPLQE
EVGASVVVSIIGLGQQATTSSALVSTLSADGHLQRWGLRPTKATAMRKAPSDLSLGWFRE
SSMRVSARHAVLASCTSAGQNAIVSSLPDGLQRLSIYNSKASSFASGLEHERTYDAGDPI
LAMDWSPSPLTESTLALAFQHRVEVLAPARTAIDVGDDDGVTHVGQRWSICLRIDMASCT
PSKIRGLAWLSRERIAVASASSIFVWGPMCEPAPADAKMATKASVSSAVSAAAVRQRPTH
LAEVIAERTGPLPQYHPSFLQECLLWNNLDAAKAIIINLRAAIAAVSPGSIEETWHFKEI
SLDAFSLVDAGNSGAARNAAVNGQAKARPNGRSIFDDDGGFASDGTDDATSFFGTKGAQS
LLRAIDGIHVPHLSDNDVKALAVIIRTLGEAEEQRRSLDDNGLRFLMSLRLLLNRPENEL
VAEGALAGELDHQDTVWAQHSNNQEPLLSAIAAGCGGKLTWAVARSTGVFMWLKSQTALR
EQAEQVARAQFMVGDDRDPVKCSLLYYALGKPKVVLGLWKQAIWHPEQKKMLQFLAKDFS
EERWRTAAQKNAFALLSQRRYEFAASFFLLGGSLQDAVNVCVRNLGDLNLAVALARIYEG
GDDGPVLRNLLQTKVLPQVFANGQRWLGSWAFWMLKRRDLAVRIIVSPLSELMADPDVAA
MLPSDAICGEGHSDDPSLAILLKQLKNKSLQTLKGTAAISERKEFDFVLHANRVLCRMGC
HLLGLNLLRTWEFEPPPTVASSTASYHAVSKQDLVNLSRVGQDIAAAVDQDGRSGRDDSR
DGFAGYTVSLDVETSTSAPRERTAHQRRESYASSMSPPPSPTMSRRRSSMLRRRSSIVND
LDIGSFAGAIGSASLENAAHQRQSASDSSDGAVASSTKSREASAASAPSTMFQHRACDNA
TITEEPTTVDEEERSATIETPSQKQVDDAAAAAANESKPKGLSVFKSAAASNASQGAQEF
DFGSFGF
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccctacgcccctcctccgccgctcatggacttgccttggccagccatcggcg
ctacgaccagcctctccaggcccacaggtgccaagtcaatgctccgtaccactgtctgtc
agcgccgcactcctccatgcaaccgcttttagcagaggcctcgaccagagggacgtcgta
accgccctggcgagctccgaccaagtctgcctcctctcccgcgaccgcgactttgtccag
gcgctccctttctggcaggccttttcggcctcagaagagaccgagagagccgtgacgtgc
gtctgcgtcggagtggacccaggcgcaagacagacgctcgtcgccgccgcaatggaccac
cgcatcgccatctgggccgcatccaacagcaccacgcgcaagtggaaggttcattcgacc
gtcatggtcaacgacgggcccgtcacctccatcgatctccacgcagagatgctcgtcatc
ggcaccgcgacctcgatcagcctctggcaactcggacagagcggcatcagcatctggagg
cgcacctggtccaggccgtctcccgccccgatccgtcttgcgcgcttctcgcccgaagga
agctcgattgctgcagcgaccgagggcggacagaacatcctcttgtggtcgctgcctcac
agcgctgcctcggccggcgcgtcgggtgagaagggcatacccagcctcacacagcgaatc
tttcatcctttcccggtctcgtcattcgtctggcgccacccgcccgatccttccagccaa
tcggacgtgctcgtctcatcctgtgccgacggcgtaactcgtgtctgggctgccgtcatc
gacgaacccgccaagctgcggctttgggcgacgctcgactcgacgtcggatgtcggaaag
cggctggccgaactccgccgcgcttccaccacagccaccatcgaaccggtacccttctat
ctcgaggcgcatgtcgttgccaacgcgctccgcgcaaatattggtgctctggagaaggag
ctgcagatgatggagctcggattgggcgacagtgaaggcgaggatgaccactcggcgcag
ggaaaacgacgtgatacagagatggagacggacatcaagcggacaaggcttcgaaggctg
cagcagctgctcagtgatgcgcccgacttgttcgtcaagctcgaagaagacggcttcttg
acagtgctggccgtggcgaacatcgatcgcaagcctcccaccctgctgcagacgcttacc
gtcctcaaagcaccgatccgcctgccactcaagacagcggacgttcttgatgtcgccttg
ttgccgcgctacgcaggcaacggggcctcgagcgaggacgctttcgcagttttgcagatc
cgaagcacgtccggcgctgcagtcgccgtcgacctcaacccggccctcttcttcgacggc
aggggcatcggcctgtctcatcaaggcgaggatctagcctcctttccgttcgctgcttcg
gacaatgtcgcccgcgtcgatacccgcagcccggttatcgcacactgtagcaggatcgca
cgcctagaccgatccgctgatggcaggttccttgcaagtgcttcttcgaccgaaacgatc
gtctgggacggcgaggcagggtcgcaccaacgcctgggcaagggacgcgccgtaatgcgg
ccaagttcgggcccttacgacggcaaatcgaagcaggcggcgatatctgacgatggcctg
ctgcatgccagaatatgtggcaacgagctgtgcgtcgtggcgccgcatctcttggccgaa
tccgcgtcgtgtacatcagcgctccccgaagacgtcgaggtgcttcgatttgcgcggatc
ggggaggtacagcacctcgtggcgtgcgcaaaggacggcgcctcgcgcgtatggaaagtc
cagatgggcgacagtctcaacgtggatgcggtggcaaggccaaggatccccttgcaggaa
gaagtgggggcttctgttgtggtctccatcatcggcctaggtcagcaggcgacgaccagc
tcggctctcgtctccaccctgagcgcagacggccatcttcagaggtggggtctccgtcca
actaaggccacggcgatgcgcaaggctccttccgacctcagcctaggctggtttcgtgag
agctcgatgcgggttagcgcccgccatgccgtcttggccagctgcacatccgccggtcag
aatgcgatcgtctcgtcgctgccggatggccttcagcgcctcagcatctacaactcgaaa
gcatcgtcctttgcatcgggattggagcacgagcgcacgtacgacgccggcgatccgatc
ttggccatggactggtcaccctcgccactgaccgaatccaccctcgcccttgcctttcag
caccgcgtcgaggtgctagcacccgcgcgaactgccattgatgtgggcgacgatgacggc
gtcacgcacgttggccaacgctggagcatatgccttcgcatcgacatggccagctgtacg
cccagcaagatccgtggtctggcatggctttcacgcgagcgcattgccgtcgcctcggcc
tcttcgattttcgtctggggaccaatgtgcgagcccgctccggccgacgccaaaatggca
accaaggcctccgtgagcagtgctgtcagcgctgccgccgtccggcaacgccccacacat
ctcgccgaggtcatcgccgagcggacgggacccttgccacagtatcatccgtccttccta
caagaatgcctgctctggaacaacctcgacgcggccaaggcgatcatcatcaaccttcgg
gctgcgattgccgccgtgtcaccaggcagcatcgaagagacttggcacttcaaagaaatt
tctctggatgctttttcgttggtcgacgctgggaacagcggggcggcgcgaaacgctgca
gtcaatggtcaagccaaggcccggcccaacgggcgttcaatcttcgacgacgacggtggc
ttcgcctcggacggcaccgacgacgccaccagcttcttcggcaccaagggcgctcagtcg
ctgctgcgcgcgatcgatggcatccacgttccgcacctatcggacaacgacgtcaaggct
ctcgccgttatcatccgcaccctcggcgaggccgaggagcaaaggcgcagcctagacgac
aacgggttgcggttcttgatgtcgctgcggctgctcctcaaccggcccgaaaacgagctt
gtcgccgagggggcgctggcgggcgagctcgatcatcaggacacggtgtgggcgcagcac
agcaacaaccaggagccgctgctgagcgctatcgcagccggctgcgggggaaagctgacg
tgggctgtggcaaggtccaccggcgtcttcatgtggctcaagagccaaacggcgctgcgc
gagcaggccgagcaggtggcgcgcgcccagttcatggtgggcgacgatcgcgatcccgtc
aagtgctccctcctctactacgccctcggcaagccaaaggtggtgctcggcctgtggaag
caggccatctggcatcccgagcagaagaagatgctccagttcctcgccaaagacttttcc
gaggagcgctggcggacggcggctcagaagaatgcgtttgcgctgctcagccagcgccga
tacgagtttgccgcttcgtttttcttgctcggcggcagcctacaggacgcggtcaacgtg
tgcgtccggaaccttggcgatctcaacctggccgtggcgctggctcgcatctacgagggc
ggcgacgacggtcccgttctgcgcaacctgctgcagaccaaggtgcttccgcaggtgttt
gccaacggccagcgctggctcggaagctgggcgttctggatgctcaagcgccgcgacctc
gccgtgcggatcattgtgtctccgctgtcggaactgatggccgaccctgacgtggcggcg
atgctgccgtccgatgcgatctgcggcgaggggcacagcgacgatccgtcgttggcgatt
ctgttgaagcagctcaagaacaagtcactgcagactctcaagggcactgcggccatttcc
gagcgcaaggagtttgactttgtgctccacgccaaccgagtcctttgccgcatggggtgc
catcttctgggcctcaacctgttgcggacgtgggagttcgagccgccaccgacggtggcc
agctcgacggcaagctaccacgccgtgtcgaagcaggacctggtcaacctctcgcgcgtt
ggccaggacattgcagccgcagtcgaccaagacggccgcagcggccgcgacgattcgcgc
gacggcttcgccggctacacggtatccctggatgtcgaaacgagcacgtccgccccacgc
gagcgcaccgctcaccagcgacgggagtcgtacgcctcgtcgatgtctcctccgccgagt
ccgaccatgtcaaggcgtcgcagcagcatgctgcgaagaagatccagcatcgtcaatgac
ctcgacatcggatcattcgcgggggcgatcggatcggcaagcctcgagaacgccgcgcac
caaaggcagagcgcctcggacagctcggatggcgcggtggcgtcatcgacgaagtcgagg
gaagcatcggcggccagcgctccgtcgaccatgttccagcaccgcgcatgcgataatgcc
accatcaccgaggaaccaaccacagtcgacgaggaagagcggtcggccaccatcgagacc
ccgtcacagaagcaggtggatgacgccgctgccgctgccgccaacgagagcaagccaaag
ggcctgagcgtcttcaagtctgcggcggccagcaacgccagccagggcgcgcaggagttc
gactttggcagcttcggattctga
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integrated database retrieval system