KEGG   Pseudozyma flocculosa: PFL1_03400
Entry
PFL1_03400        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFL1_03400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfp03019]
    PFL1_03400
Messenger RNA biogenesis [BR:pfp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PFL1_03400
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     PFL1_03400
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 19317510
NCBI-ProteinID: XP_007879108
UniProt: A0A061H8B6
LinkDB
Position
Unknown
AA seq 263 aa
MASSSTTTSQALLLPGQPLSVSKTTTPSPQLGPGTYTRGDHILSSLVGYEQRTVPAAPSS
SLLKGKAKGAAAPAVQAATLSVHGAENSFVVPRPDSIVIARVTRVTPRQAHLSILIVDGQ
PCGSSSSTSSASIATGRGNHAAGEGEGTDFQGVVRSQDVRNTEKDKVRLGDCFRPGDIVR
ASVISLGDARSYYLSTAANNLGVIYATSSSSSLAGTPGAGAAAASGPGWEVTGNPMQPIS
WQELVDPITGVVEKRKCAKPDGI
NT seq 792 nt   +upstreamnt  +downstreamnt
atggcctcatcatccacgacgacatcacaagcgctgctgctgccgggacagccgctctcg
gtttcaaagaccaccacgccctcgccccagctcggaccgggcacttatacccgcggcgac
cacatcctctcgtcgctcgtcggctacgagcagcgcaccgtaccagcagcaccatcctcg
tcgctcctcaagggaaaggcaaaaggcgcagcagctcctgccgttcaggccgccacgctc
tcggtccatggcgcagagaacagtttcgtcgtgccgagaccagacagcatcgtcatcgcc
cgcgtcacacgagtgacaccgcgccaggcccacctctcgatcctcatcgtcgatggccag
ccgtgcggctcctcatcctcgacctcatccgcctcgatcgccacagggaggggcaaccat
gcggccggagagggagagggtaccgacttccagggtgtagtgcgatcgcaggatgtccgc
aacacggaaaaggacaaggtccgtctgggcgactgcttccgacccggcgacatcgtcaga
gccagcgtgatctcgctgggagatgcgaggtcctactacctctcgacggccgccaacaac
ctcggcgtcatctacgccacctcttcctcatcctcgctcgcagggacgcccggggcgggg
gcggcggcggcgagcgggcctgggtgggaagtgacgggcaacccgatgcagcccattagc
tggcaggaactggtcgatcccatcacgggcgtcgtcgaaaagcgcaaatgcgcaaaaccc
gacggcatctga

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