KEGG   Pseudozyma flocculosa: PFL1_03501
Entry
PFL1_03501        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03030  DNA replication
pfp03410  Base excision repair
pfp03420  Nucleotide excision repair
pfp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFL1_03501
   03410 Base excision repair
    PFL1_03501
   03420 Nucleotide excision repair
    PFL1_03501
   03430 Mismatch repair
    PFL1_03501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfp03032]
    PFL1_03501
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_03501
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_03501
DNA replication proteins [BR:pfp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PFL1_03501
  DNA Replication Termination Factors
   ELG1-RFC complex
    PFL1_03501
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PFL1_03501
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PFL1_03501
  Check point factors
   HRAD17(Rad24)-RFC complex
    PFL1_03501
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_16 AAA_22 AAA_3 AAA_14 Rad17 RCF1-5-like_lid nSTAND3 RuvB_N Viral_helicase1 Gp44_lid nSTAND_NTPase5 MeaB Mg_chelatase AAA_5 New_glue NTPase_1 AAA_assoc_2 FtsK_SpoIIIE AAA_19
Other DBs
NCBI-GeneID: 19317611
NCBI-ProteinID: XP_007879209
UniProt: A0A061H9T0
LinkDB
Position
Unknown
AA seq 363 aa
MTTSPTTTATAAGASSATAASSKAATTTTTTTDAAAATSYELPWVEKYRPQRLDDVVGNR
ATIERLKAIQHDGNCPHLLISGLPGIGKTTSVHCLAHALLGDAYREGVLELNASDERGID
VVRNKIKTFAQKKVSLPPGRHKIIILDEADSMTPGAQQALRRTMEIYSSTTRFAFACNQS
SKIIEPIQSRCAILRFAKVRDEEILKRLLEICEMEGVEYNDEGLAAIIFTTEGDMRQAIN
NLQSTYTGLGFVNQENVFKVCDQPHPHLVRAILESCRAADIDAAMDRLDEIWSKGYSAVD
IVTTLFRVAKTLDSLSEAVKLDFIREIGWTHIKVLEGVSTNVQLGGLLARLCRLNMNAKL
FEL
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgacgacctcacccacaacaacagcgacagcggcgggtgccagctcggccaccgccgca
tcctcaaaggcggccaccaccaccaccaccaccaccgacgcagcggctgcgacgtcctac
gagctgccgtgggtggaaaagtaccgcccgcagcgcctcgacgacgtcgtcggcaaccgc
gccaccatcgagcgcctcaaggccatccagcacgacggcaactgcccgcacctcctcatc
tcgggcctgcccggcatcggaaagacgacgtcggtccactgcctcgcccacgccctcctc
ggcgacgcctaccgcgagggcgtgctcgagctcaacgcctccgacgagcgcggcatcgac
gtcgtccgcaacaagatcaagacgtttgcacagaaaaaggtcagcctgccccccggaagg
cacaagatcatcatcctcgacgaggcagacagcatgacgcccggcgcgcagcaggccctc
aggcgcaccatggagatctactcgtccaccacccgcttcgcgttcgcgtgcaaccagtcg
agcaagatcatcgaacccatccagtcgcgctgcgccatcctccgcttcgccaaagtgcgc
gacgaagagatcctcaagcgccttctggaaatctgcgaaatggagggagtagagtacaac
gacgaagggctggccgccatcatcttcaccaccgagggcgacatgcgccaggccatcaac
aacctccagtcgacctacacgggcctcggcttcgtcaaccaggaaaacgtcttcaaggtg
tgcgaccagccccacccgcacctcgtccgcgccatcctcgaatcctgccgcgccgccgac
atcgacgccgccatggacaggctcgacgagatctggtcaaagggctactcggccgtcgac
atcgtcaccaccctcttccgcgtcgcaaagaccctcgactccctctccgaggccgtaaag
ctcgactttatccgcgaaattggctggacccacataaaggtcctcgagggcgtgtcgacc
aacgtccagctcggtggtctgctagctcgcctctgcagattgaatatgaatgccaagcta
ttcgagctttag

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