Pseudozyma flocculosa: PFL1_03598
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Entry
PFL1_03598 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFL1_03598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfp03041
]
PFL1_03598
Spliceosome [BR:
pfp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PFL1_03598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
19317706
NCBI-ProteinID:
XP_007879308
UniProt:
A0A061H9U4
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MASLADELLADLGSDGSGDEQDYQQSSEQQQHQHPAGHDSGLTPTNGKKRAEPLADDDDD
DDDNTSHTNGRHATGSSPNKRAHLDDADLDDLDDLDSGEDDDAGADRESFAEDGSTSTMQ
LGRNAVKPAEELDEDEVENIDMTKLDHVHKVARLMSSGKIDGILKQIDHFMALPEPDIAG
VLEESPEYELIVKANNLAVDVDNEVMLVHKFIRDHYSPRFPELESLILNPWEFVQAVQAL
GNDDDLSRAKLEGVLPHGTVVVISMTASTTDGRPLDAATWKRVQEACDLVFELETVRRRI
LGYVESRMTFIAPNLSAVVGTRTATKLLGVAGGLEGLSKIPACNVHLLGANRKAAVGFSS
LAQGGGAARSNGFIAQSELVQSTPDDYKRQAVRMVSAKALLAARVDAGKSSARDGSYGYR
LHAELSRKLEKLQEPPPQKLAKVLPIPKEGSHKKKRGGRRARAAKERYGMTELRKLANRV
EFGKQEDEAFGYDESVGLGMIGSSTGKVRAQVGEDRSKARMSKANKNRIAALKQRPTAGS
AALESGTASSLSFTPVQGLELIDPSKQQKAQQANEKWFKEGQFSLLPGAKSSTMRQFPGS
MGPPPPPSSSSSSRK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttggcagacgagctgctcgctgacctcggctcagacggctccggagacgag
caagactaccagcagagcagcgagcagcagcagcatcaacatccagccggccacgactcc
ggcttgaccccgacaaacggcaagaagcgggcagaaccattggcagacgacgacgacgac
gacgacgacaatacatcacatacaaacggcagacacgcaaccggatcgtctcccaacaag
agagcgcatctcgacgatgcggacctcgacgacctcgacgatctcgacagcggcgaagac
gacgacgccggtgcggatcgcgagtcgttcgccgaggatggcagcacatcgacgatgcaa
ctcggcaggaacgcagtcaagccggcagaggagctcgacgaggacgaggtcgagaacatt
gacatgacaaagctcgaccacgttcacaaggtggcgaggctgatgagcagcggcaagatc
gacgggatcctcaagcaaatcgatcacttcatggcgctgcccgagcccgacatcgctggc
gtgctcgaggagagtcccgagtacgagctcatcgtcaaggccaacaacctcgccgtcgac
gtcgacaacgaggtcatgctggtgcacaagttcatccgcgatcactactcgccccgcttc
ccggagctcgagagcctgatcctcaacccgtgggagttcgtccaggcggtgcaggcgctc
ggcaacgacgacgacctgtcgcgcgccaagctcgagggtgtgctgccacatggcaccgtc
gtcgtcatcagcatgacggcgtcgaccaccgacggacgtcccctcgatgccgccacttgg
aagcgcgtccaggaggcgtgcgacctggtctttgagctcgagacggtgcggcgaaggatc
ctcggctacgtcgagtcgcggatgacgtttatcgcgcccaacctgtcggccgtcgtcggc
acgcggacggccaccaagctcctcggcgtggcgggtggtctagaagggctgagtaagatc
ccggcgtgcaacgtgcatctgctcggcgccaaccgcaaggcggcggtcggcttctcgtcg
ctggcgcagggcggcggtgcggctcggtcgaacggcttcatagcccagagcgagctggtg
cagtcgacgccagacgactacaagcggcaggcggtgcgcatggtatcggccaaggcgctg
ctcgcggcgcgcgtcgacgcgggcaagagctccgcgcgggacggcagctacggctaccgg
ctgcacgccgagctatcgcgcaagctcgagaagctgcaggagccgccaccgcagaagctg
gccaaggtgctgccgatcccaaaggaagggagccacaagaagaagcggggcggtcgccgc
gcgcgggcggcaaaggagcggtacggcatgacggagctgcgcaagctggccaaccgcgtc
gagtttggcaagcaggaggacgaggcgtttggctacgacgagagcgtcgggctcggcatg
attggcagctcgacgggcaaggtccgggcgcaggtgggcgaggaccgcagcaaggcgcgg
atgagcaaggccaacaagaaccgcatcgccgcgctcaagcagcgtccgacggcgggctcg
gccgccctcgagagcggcacggccagcagcctcagcttcacgccggtgcagggcctcgag
ctcatcgacccgtccaagcagcaaaaggcgcagcaggccaacgaaaagtggttcaaggag
ggccagttttcgctgctgcccggcgccaagtcgtcgacgatgcgccagtttcccgggtcc
atgggtccaccgccccctccgtcgtcgtcgtcgtcgtcgagaaagtga
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