Pseudozyma flocculosa: PFL1_03706
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Entry
PFL1_03706 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_03706
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PFL1_03706
Surveillance factors
Other surveillance factors
PFL1_03706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
19317814
NCBI-ProteinID:
XP_007879416
UniProt:
A0A061HA54
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MATSMQFGPEWMRKAPVKNNSSNSIGKDPSSPAGAASSGRSENGATPTGGPAATGKRNGA
MGGGLGAVLNGPTPVTSPTVTSPGAFSFAAAAGGAASAAAAGSHQHQAFGGSSQDGDSVA
SSALSNGAASAKDRQSREKLLSLYSTDRPAKPAQSEASPLEGGAGTDKAGSAGRKKTGAD
REQRRPSNFAELGAGAGPLSPSLGGEPRGINARSTSGGSSGGFGSAGTSNWDRADKERPG
LFQRASSSALTSTVAAGRPLSPSIPRERFGGIQGGVLSGVGPQSRKRMDSDNGSTAGSRG
GAKSGSEDVTSPSQGSAQASRGSAGFAEAFSSNKARGKAGVGEGTGQAVQEPEGNEGGAP
SARFGRTRDRQPGEGPIGPPADGSAGFNKFAGYDRKRERQASHFKAGTVPGDAEANGTGH
GDADGRNEQHGRAERRGSAEDHGRGALSSTNAHDTSMDSDLAQHATAVLGSLKLDEDDPS
AQMLPPNPEQPTPPTWSADTALWLYRDPSGQVQGPFTAVVMQDWYRQSYFSDDLLVRRQE
DDEFRPLVQVIAAIGNALQPFLVPPHSWLQPPDAFKNAQGQPDTRRSSLVSPPGSGDDAA
SDSRIDQDHDASRFAVSGQVDSLGGGGGGGAGWNGASQNQQQWPSQLNLGFGTTTPQPMS
PFGRPDMFAGQGAGLDNRFRTQEELVALIRERELQEQRQAAAAAAARGQNLGYGQLDPFM
GVLGRGGWDAPGAASWAPHGGLPSFDPAFTGHPSPLMAERQAFEAFHQRGGAGPDQGGAW
AKGPSTPRSHFDQPNPFNNRPGQWDAQGAWSSQGNMTPEALNRQAHDFQEGGFRHESAKP
FSDPIGTPRRARSPAAPSPALEQKSDAFEDRREESATTTAVEPIPEADGLRDSAQAQAAT
PKEVEAQAQEEAHPAKEPEVKATEPKSAEPPKAEVEAAPAPTAVEEPGPEQLWPQSPSAV
EFASEPDLSSMPGLTLPSKAPTSVAATTDARRTANRSDTKGEAAKRPTTRQQQAAAAAAT
ATSGNVRVVSQEQFRRAPEEESASLNQVPLSAWLPDAAGESSTPTSKPAPWASRDDASSS
GTPGPSLREIQEAEAKRAEARKAAERAAAAQPGFGGGGFAGALDAHTRHLAAPTSGSVGS
ALKPKPAPAAAPAFNDINSPSPEFVRYLKDNLKGLTIRVDDFIEMLMSFPLDPSPDVIEI
IAESVYANSSTLDGRRFAADFVSKRKMDVQGRQQHPYSSSSSVSSGGGASSASTPFQSKW
SSAGSSGGMGTFGSGAAGFGGGSGSSGGGIGGRSSGGATSPQMARSAADVMKGPGSAKAG
VDSFGGFKVVKAKGSKKRAN
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcgatgcaattcggccccgaatggatgcgcaaggctccggtcaagaacaac
tcgtcgaacagcatcggcaaggacccctcgtcccccgcaggtgcagcttcctctggccgc
agcgagaacggcgcgaccccaactggtggccccgcagcgacgggcaagcgaaacggagcc
atgggtggcggcctaggcgccgtcctcaatggccctacgccggtgacgagccccacggtc
acctcgcccggcgccttctcctttgctgctgcagcaggaggcgccgcgtcggcagcggcg
gcgggctcccatcagcatcaggctttcggcggcagctcgcaggacggggatagcgtcgct
tcgtcggccttgtccaacggcgcggcttcggccaaagatcggcagtcgcgcgaaaagctg
ctgagcctgtacagcaccgaccggcccgccaagcctgcgcagagcgaggccagtcctctc
gagggcggtgcgggcacggacaaagcgggttcggccggacgtaaaaagaccggcgccgat
cgggagcagcgacgtccctcgaactttgcagagctgggcgccggggccggtccgttgtcc
cccagcttgggtggcgagcctcgcggaatcaatgctcgctcaacctctggcggatcctcc
ggcggctttggatctgcgggcacctcgaactgggatcgggccgacaaagagaggccgggc
ctctttcagcgtgcttcgagcagtgccctcacctcgaccgtcgctgctggccgcccgctt
tcgccatccataccgcgcgagcgcttcggcggcatccagggcggcgtgctctcgggtgtc
ggaccccagagtcggaagagaatggacagcgacaatggctctacggccggctctcgcgga
ggtgctaaatccgggtccgaggatgtcacttcgccgtcgcaaggctcagcacaggccagt
cgcggcagcgctggcttcgcggaagccttcagctccaacaaggcccggggcaaggctggt
gtcggggagggcacaggccaggcggtccaagagcccgagggcaacgagggtggcgcacct
tccgccaggttcggccgcaccagggatcgacaacccggcgaaggaccgatcgggcctccg
gccgatggcagtgccggcttcaacaagttcgccggttacgaccgcaagagagaacggcag
gccagccacttcaaggccggcacggtcccgggcgacgccgaggccaacgggacgggccac
ggcgacgccgacggacgcaacgaacagcacggacgcgccgaacgtagaggatctgccgag
gatcacggcaggggcgccctctcttctaccaatgcccacgacacgagcatggactcagac
ctcgcgcagcacgctaccgcagtcctcggctcgctcaagctggacgaggacgatccatcg
gctcagatgctcccgccgaacccggaacagccgaccccgccgacttggtctgccgacacg
gccctatggctgtaccgagacccgtcgggccaggtgcaaggtcccttcacggccgtcgtc
atgcaggactggtaccgccagagctacttctccgacgatctcctggtccgtaggcaggag
gatgacgaattccgcccactggtgcaggtcatcgcagccatcggcaacgcgctccagcct
ttcctggtcccaccgcacagctggctgcagcctcccgacgccttcaagaacgcgcaaggc
caaccggacacccggaggagctcgctcgtcagccctcctggcagcggcgacgatgccgcc
tccgacagccggatcgaccaagaccacgatgcttcccgcttcgctgtctccggccaggtg
gactcgctgggcggcggcggcggcggcggcgctggctggaacggtgcgtcgcagaaccag
cagcagtggccttcacagctcaacctgggctttggcacgacgactccgcagccgatgtcg
ccgtttgggcgaccggacatgtttgcaggccagggtgccggcctcgacaaccgcttccgg
acccaggaagagctcgtcgccttgatccgagagcgcgagctgcaggagcagaggcaggcc
gccgccgccgctgctgctcgcggtcagaaccttgggtacggacagctggaccccttcatg
ggagtccttggccgtggcggctgggatgctccgggcgcagccagctgggccccgcacgga
gggctgccgtctttcgatcccgcctttaccggccacccgagccccctgatggccgagcgc
caggcgttcgaggccttccaccagcgaggcggcgctggtcccgaccaaggcggagcgtgg
gccaaggggccctcgacgccgcgctcccactttgaccagccgaatccgttcaacaaccgg
cccggccagtgggacgcccagggcgcctggagcagccagggcaacatgacgcccgaggcc
ttgaaccgccaggcgcacgactttcaggagggaggctttcgtcacgaaagcgccaagcca
ttcagcgaccccatcggcactccgcgacgcgcacggtcacctgcggcgcccagcccggcc
ctcgagcaaaagtccgatgcatttgaagacaggcgcgaagagtctgctacgaccacggcc
gtagagccaatcccggaggccgatgggcttcgcgatagtgcgcaagctcaagccgccacc
cccaaggaagtagaagcccaggcgcaagaggaggcacaccccgcaaaggagcccgaggtc
aaggcaaccgagccgaagtccgccgagccgccaaaggctgaggtcgaggctgcaccggcc
cccacggcagtggaggagccgggtccggagcagctgtggcctcagagcccttcggctgtc
gaattcgcctccgagccggacctctcgtcgatgcccgggcttaccctccccagcaaggct
cccacttcagtcgccgctaccaccgatgcgcgccgcacagccaaccgttccgacaccaag
ggcgaggctgcaaagcggcccactacccgtcagcagcaggcggcggcggcggcggcgaca
gccacgtccggcaacgtccgggtcgtctcccaggagcagttccgccgtgccccggaggag
gagagcgccagtctcaatcaggtgccgctctctgcatggctgccggatgcggccggcgaa
tcgtcgacgccgacgtcgaagcccgccccatgggcctcgcgtgacgacgcctcctcgtcg
ggcactcccggacccagtctgcgcgaaatccaagaggccgaggccaagcgggccgaggcc
cggaaggctgccgagcgggcggccgccgcccagcccggcttcggcggcggcgggttcgcc
ggcgccctcgacgcccacacgcgccacctcgcagcccctacgtccggcagcgtcggcagc
gcgctcaagcccaagcctgcgcccgccgccgcccccgccttcaacgacatcaactcgccc
agtcccgagttcgtgcgctacctcaaggacaacctcaagggcctgacgatccgggtcgac
gactttatcgagatgctgatgtcgttcccgctggacccatcgccggacgtcatcgagatc
atcgccgagagcgtctacgccaacagcagcacgctcgacggacgccggttcgccgccgac
tttgtgtcgaagcgcaagatggacgtccagggccggcagcagcacccgtactcgtcgtct
tcgtcggtgtcgtcgggcggcggcgcatcgtcggcctcgacgccgttccagtccaagtgg
tcgtcggccggcagctcgggcggcatgggcacctttggaagcggcgcggcaggcttcggt
ggcggtagcggcagcagcggcggcggcattggcggacgcagcagcggcggcgccacgtcg
ccgcagatggcgcgaagcgccgccgacgtcatgaagggcccgggctcggccaaggcgggc
gtcgacagcttcggcggcttcaaggtggtcaaggccaagggcagcaagaagcgcgccaac
tga
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