Pseudozyma flocculosa: PFL1_03781
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Entry
PFL1_03781 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFL1_03781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_03781
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFL1_03781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
ADAMTSL1
Motif
Other DBs
NCBI-GeneID:
19317889
NCBI-ProteinID:
XP_007879496
UniProt:
A0A061H7A1
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSFGGSGFSFGSTPAAGGNNSSAPKPFSFGATTNNTQSSSTPASGGLFGSTSNTGATGGG
SLFGGTSAPSTGGFSFGAAKPATPSGTTTPGAAPTGGFSFGGASTGGGGFKLGGSASTPA
ASAAPSGTTTPAGQPPANLFGGGANKPAAAPAPAAGGFGGGGLFGQNKPASPAPGATGTT
EASSNGRLLRLHAWGGSNTAAGTDASKPAAAPSTGAGGFSFGGATSTANKDATASTASPA
PAANPFAPKPAASSALATTSAASATTTAAPAPATGGFSFGKPATSTAATTSTPAGAPAAA
APAAGAKPAGASFSFGAKPAESAATTTTTTTTTTTTASAPAASTATSASSAAPATGAAST
TTPGTVSFGAPKTTAAPATTAPAAAAARPAPVPAPSLLRGKSMDEIVNKWSAELDSAVKE
FSKQAGEVAAWDRVLLQGGDEISKLLSTLTQAEERQVGIEQTLDYVEQQQTEFSSLLDGY
ESQIGDLLSGVQGGGPSTYGGALRGNAAEAGAADVEREKAYALAETLNAQLDDISRNLSS
MIGEVNSLSSPHAPSSAAAASNVEDANLGALKVGGRSSGAGASDDPVSQIASILNAHLAS
LKWIDESSSNLRDKIEGLRRGQIA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttggaggttccggcttctcgtttggctccacgccggccgcgggcggcaacaac
agcagcgcacccaaacccttctcctttggcgccaccaccaacaacacacaatcctcgtcc
accccggcatcgggcggactctttggatccacttccaacacaggcgcgaccggcggcggc
agtctctttggaggcaccagtgcgccctccaccggcggcttctcgttcggcgctgccaag
cctgccaccccttccggcaccacgactcccggtgctgcgcccaccggcggcttctcgttc
ggcggcgcttcgacgggaggcggaggcttcaagctcggcggtagtgcatccacgcccgca
gcatctgcggctccctctggcaccactacccccgcaggacagcctcctgccaacttgttc
ggcggcggtgccaacaagcccgccgctgcccctgctcctgccgctggcggtttcggtgga
ggcggcctgtttggccagaacaagcctgcatccccggcacctggcgccacaggtaccact
gaagccagcagcaacgggcggcttctccggcttcacgcttggggcggcagcaacacggcg
gcgggcacagacgcatccaagccagccgcggctccgagcactggggccggcggcttcagc
ttcggcggtgccacgagcaccgccaacaaggatgctactgcctctaccgcatcaccggca
cccgccgccaacccgttcgcgccaaagcctgccgcatcgagcgcacttgcgaccacctct
gccgcttcggcgacgacgacggccgcacctgcgcccgcgacaggcggcttctcgtttggc
aagcccgcaacgtcgacggcggcgaccacatccaccccggcgggggctcccgccgctgct
gctcccgctgctggcgccaagccggctggcgcttcgttcagctttggtgccaagcctgcc
gagtcggcggcgacgacgacgacgacgacgaccaccaccaccaccaccgcctcagcaccc
gcggcatcgacggcaacttccgcctcaagcgccgcgcccgctaccggagcagcctcgacg
acgacgcctgggactgtcagcttcggtgcacccaagacgaccgctgctcctgcaactact
gcccctgcggcggcggccgcgcgtccggcgcccgttccggcgccctcgctgctgaggggc
aagagcatggacgagattgtcaacaagtggagcgccgagctcgattcggcggtcaaggag
ttttccaagcaggcgggcgaggtggccgcctgggaccgcgtgctgttgcagggtggtgac
gagatttcgaagctgctgagcacgctgacgcaggccgaggagaggcaggtgggcatcgag
cagacgctcgactatgtcgagcagcagcagaccgagttctcctcgctgctggacggctac
gagtcgcagattggcgatctgctgtcgggcgtgcagggcggcggcccctcgacctatggc
ggcgcgctgcgaggcaacgccgccgaggctggtgcggccgatgtcgagcgcgagaaggcg
tacgcgctggccgagacgctcaatgcgcagctcgacgacatctcgcgcaacctctcttcg
atgattggcgaggtcaactcgctgtcgtcgccgcacgccccttcgagcgcggcggcggcg
tccaacgtcgaggacgccaacctcggcgcgctcaaggtcggcggacgctcgagcggcgcg
ggcgccagcgacgaccccgtgagccagattgccagcatcctcaacgcgcacctcgccagc
ctcaagtggatcgacgagagcagctctaacctgcgcgacaagatcgagggcctgaggcgc
ggccagattgcctga
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