Pseudozyma flocculosa: PFL1_03802
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Entry
PFL1_03802 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PFL1_03802
Enzymes [BR:
pfp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PFL1_03802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
19317910
NCBI-ProteinID:
XP_007879517
UniProt:
A0A061H7U5
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MRLSAGLAAVSTWLGLVSLLVLQQAEPVQAKLTLQETADTIAINNDRLNVVLSKKQGGVI
SSLSLDGQDLLGPTDASKNIGQGPYLDCYCTPQGFYTPGRKAPEFAVFQGTDSAGVDYAG
VRMGETYAATGQRLEFYYFLRDGQETGLHNFARLTYDNATTPFLRNLQEFRTLFRPNTPL
WTHVTTNERLTAPIPKPETVAKQKVVQDATWDMDPDGTSTDPYVTQFAKYYTKYTFSDTW
QDHDVHGLFADGTQSRDGRSYGAWLVMNTRDTYFNGPKNSDLTADANTVINYNYIVSNHH
GNGTPNITTGFRRTFGPFYYHFNAAPGGVGSIEALRADARKLASPTWNADFYDSIAKHVP
DYVPQAGRGSWQGQIKLPKGARNPIAVLSVAGHDFQDNAVDTKAYQYWTRLNVGKDGVTA
TGNIDMVKSGSYRLTVYAEGIFGQHVVDPIQISARGGAASAPQGTGRKRAAPAPTVTKTV
WNAESNGQELWRIGVPDRSSGEYLHGDQPDPTHPLHPQQRRIYWGAYDFPTDFPNGVRFE
VGKSDPQRDLNYVHWSQFGGKANSVRTQPVVDKVNNWTLVFDAAQDRLSGRKKATFTVQL
AAAKTAAGNTDTFNSSEPLANLPLVVSVNKHDLEAWRIPYYQSSSCAVRSAVSCYNLAHK
YTFDVALLQPGQNEIVLSLPYRGKNAESAVLPEQVYVQYDAMRLELA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctctgcaggccttgccgccgtgtcgacctggctcggtttggtctcgctgctc
gtgctgcagcaggcagagcctgttcaggccaagctgacgctccaggagacggccgatacg
atcgccatcaacaacgaccgcctcaacgtcgtgctgagcaagaagcagggcggcgtcatc
agcagcctctcgctcgacggccaggacctgctgggccccacggacgcgtcaaagaacatc
ggccagggcccgtacctcgactgctactgcacgccgcaaggcttctatacgcccggtcgc
aaggcgcccgagttcgccgtgtttcaaggcaccgacagcgccggggtcgactacgcaggc
gtgcgcatgggcgagacttacgccgccaccggccagcgcctcgagttctactacttcctc
cgcgacggccaggagacgggcctgcacaactttgcgcgcctgacctacgacaacgcgacg
acgccgttcctgcgcaacctgcaagagttccgcaccctcttccggccaaacacgcccctc
tggacgcacgtcacgaccaacgagcgcctcaccgcgcccatccccaagcccgagacggtg
gcaaagcaaaaggtggtgcaggacgccacgtgggacatggacccggacggcacctcgacc
gacccctacgttacgcagtttgcaaagtactacaccaagtacacgttctcggacacctgg
caggaccacgacgtccacggcctgtttgccgacggcacccagtcgcgcgacggccgctcc
tacggcgcctggctcgtcatgaacacccgcgacacgtacttcaacggcccaaagaactcg
gacctcacggctgacgccaacaccgtcatcaactacaactacatcgtctcgaaccaccac
ggcaacggcacgcccaacatcaccacgggcttcaggcgcacgtttgggcccttctactac
cacttcaacgccgccccgggcggtgtcgggtcgatcgaggcgctgcgggccgacgcgcgc
aagctcgcatcgcccacgtggaacgccgacttctacgactcgatcgccaagcacgtgccc
gactatgtgccgcaggccggacgcggctcttggcagggccagatcaagctgccaaagggg
gcgcgcaacccgatcgccgtgctgagcgtggcgggccacgacttccaggacaacgccgtc
gacaccaaggcctaccagtactggacgcgcctcaacgtcggcaaggacggcgtcacggcc
acgggcaacatcgacatggtcaagtcgggctcgtatcgcctgacagtgtacgccgagggc
atctttggccagcacgtcgtcgacccgatccagatctcggcgcggggcggcgccgcttcg
gcgccccagggtacgggccgcaagagggcggcccccgcgccgaccgtgaccaagaccgtc
tggaacgccgagtccaacggccaggagctgtggcgcatcggcgtgcccgaccgcagctcg
ggcgagtacctccacggcgaccagccggaccccacgcacccgctccacccgcagcagcgc
cgcatctactggggcgcctacgacttccccaccgacttccccaacggcgttcgcttcgag
gtgggcaagtcggacccgcagcgcgacctcaactacgtgcactggagccagttcggcggc
aaggccaactcggtgcgcacccagcccgtcgtcgacaaggtcaacaactggaccctcgtc
tttgacgcggctcaggaccggctcagcggacgcaagaaggccactttcaccgtccagctc
gccgccgccaaaacggcagcgggcaacacggacacgttcaacagctccgagcccctcgcc
aacctgccgctcgtcgtcagcgtcaacaagcacgacctcgaggcgtggcgcatcccctac
taccagagcagctcgtgcgccgtcaggtccgcggtgagctgctacaacctcgcccacaag
tacacctttgacgtcgccctcctccagcccggccagaacgagatcgtcctcagcctgccc
taccgcggcaagaatgcagagtcggccgtgctacccgagcaggtctacgtccaatacgat
gccatgcgcctcgagctggcctga
DBGET
integrated database retrieval system