KEGG   Pseudozyma flocculosa: PFL1_03851
Entry
PFL1_03851        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03022  Basal transcription factors
pfp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PFL1_03851
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFL1_03851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_03851
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_03851
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_03851
Enzymes [BR:pfp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     PFL1_03851
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PFL1_03851
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    PFL1_03851
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PFL1_03851
SSDB
Motif
Pfam: DEAD_2 HBB Helicase_C_2 ResIII DEAD nSTAND3 PspAA DUF4932
Other DBs
NCBI-GeneID: 19317958
NCBI-ProteinID: XP_007879565
UniProt: A0A061H6Q2
LinkDB
Position
Unknown
AA seq 855 aa
MKFYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQ
KFHPASRKLIYCSRTVPEIEKALAELKRLMEYRARYNVPEGEESEVAKNEASGSNGPGDY
SIDMKGRGKAGGQMEDILALGLSSRKNLCIHPSVGRERKGKVVDARCRDMTSAWACEKGR
QDPGSVELCDFHEELGKMEPGQLIPQGVWTLEEVKEYSREKGICPYFAIRRMLPFVDIII
YSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINQL
SERVEEIKRTDAGKLQDEYARLVEGLAEQGDQREAETFMSNPVLPEDLLQEAVPGNIRRA
EHFVAFLKRFVEYLKTRMRVLHVVAETPPSFLQHLKDITYIERKPLRFCAERLRMLVSTL
ELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETEHATVPNPIFHFTCLDASLAIAP
IFERFSSVIITSGTISPLDMYPKMLKFDTVVQESYAMTLTRQCFLPLVITRGSDQVAISS
RFEVRNDPAVVRNYGSILIEYAKCMPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYKL
IFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQ
YTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFAR
ADKRAKLPKWIAQYITEPHSNLSTDMAIVESKLFIRTMGQPFPEGKNGVSLWDLSDIESR
QAKERETFERLMEGKLRIDSTGQVVEKGEGDDDDDEGDGGGGDDEDDDEDDEFDNAFGKG
EELAQIKELDDMDED
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgaagttctacatcgacgagctgcccgtcctcttcccttatcccaaaatctaccccgag
caatatgcctacatgaccgatctcaagaggacgctcgacgccaacggccactgcgtcctc
gagatgccctcgggcaccggcaagaccgtgtctctgctgagcttgatcgtcagctaccaa
aagtttcatccggcgtcgaggaagctcatctactgctcgcgaaccgtgccagagattgaa
aaggcgctggcggagctcaagcggctgatggagtaccgggcgcgctacaacgtacccgaa
ggcgaagagtccgaggtggccaagaacgaggcctcgggctccaacggccctggcgactac
agcatcgatatgaagggccgcggcaaggcgggcggccagatggaggacatcctcgccctc
gggctcagcagccgcaagaacctctgcatccatccgagcgtcggccgcgagagaaagggc
aaggtcgtcgacgcacgctgcagggacatgacgagcgcctgggcgtgcgaaaagggcagg
caggaccccggcagcgtcgagctttgcgacttccacgaggagctgggcaagatggagcca
ggccagctgatccctcagggcgtgtggacgctcgaggaggtcaaggagtactccagggag
aagggcatctgcccctactttgccatccgaaggatgctgccctttgtcgacatcatcatc
tacagcttccactacctgctcgacccaaaggtcgccgagcaggtcagcaaggagatgagc
aaggacgccatcgtcgttttcgacgaggcccacaacattgacaacgtctgcatcgagtcg
ctaagcatcgacctgacgcggccgatgctggacagcgcgtaccgcagcatcaaccagctg
tccgagagggtcgaggagatcaagcggacggacgcgggcaagctgcaggacgagtacgca
cggctggtcgaagggctggccgagcagggcgaccagcgcgaggccgagacgttcatgtcg
aacccggtgctgcccgaggacctgctgcaggaggcggtgcccggcaacatccggcgtgcc
gagcactttgtcgccttcctcaagcgctttgtcgagtacctcaagacgaggatgcgggtg
ctgcacgtcgtggccgagacgccgcccagcttcctgcagcacctcaaggacatcacctac
atcgagcgcaagccgctgcgcttctgcgccgagcggctacggatgctcgtcagcacgctc
gagctgacgcggctcgacgagtattcggcgctgcaaaaggtggcggcgtttgcgacgctg
gtggccacctatgacaagggcttcctgctgatcctcgagccgttcgagaccgagcacgcc
accgtgcctaaccccatcttccactttacctgcctcgacgccagcctggctatcgcgccc
atctttgagcgcttctcgagcgtcatcatcaccagcggcaccatcagcccgctcgacatg
taccccaagatgctcaagtttgacaccgtggtgcaggagagctacgccatgacgctgacg
cgccagtgcttcctgccgctcgtcatcacgcgcggcagcgaccaggtggccatcagctcg
cgcttcgaggtgcgcaacgacccggccgtcgtgcgcaattacggaagcatccttatcgag
tacgccaagtgcatgccggacggcatcgtcgccttcttcccctcgtacctctacatggag
agcatcgtcgccgcctggcacgacatgggcatcctcgacgaggtgtggaagtacaagctc
atctttatcgagacgcccgacgcgcccgagacgagcatcgcgctcgaaaattaccgcagg
gcctgcgataacggacgaggcgccatcctgctctcggtcgcgcgtggcaaggtgtcggag
ggcatcgacttcgaccacaactacggccgcgccgtaatcatgtttggcgtgccgtaccag
tacaccgagtcgcgcatcctcaaggctcgcctcgagttcctgcgcgacaacttccgcatc
cgcgaaaacgacttcctgaccttcgacgccatgcgacacgccgcccagtgcgtggggcgt
gtgttgcgcggaaagaccgactacggcctgatggtgtttgccgataagcgctttgccagg
gccgacaagcgggccaagctgccaaagtggatcgcgcagtacattacggagccgcacagc
aacctctcgaccgacatggccattgtcgagtcgaagctctttatccggacgatgggccag
cccttccccgaaggcaagaacggggtgagcctgtgggatctgagcgacatcgagtcgcgc
caggcaaaggagcgcgagacgtttgaacggctcatggaaggcaagcttcgcatcgacagc
acgggtcaggtggtcgagaagggcgagggcgacgacgacgacgacgagggcgatggcggt
ggcggcgatgacgaagacgacgacgaggatgacgagtttgacaatgcgtttggcaagggc
gaggagctggcgcagatcaaggagctcgacgacatggacgaggattag

DBGET integrated database retrieval system