Pseudozyma flocculosa: PFL1_03851
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Entry
PFL1_03851 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03022
Basal transcription factors
pfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFL1_03851
09124 Replication and repair
03420 Nucleotide excision repair
PFL1_03851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_03851
03036 Chromosome and associated proteins [BR:
pfp03036
]
PFL1_03851
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_03851
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PFL1_03851
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PFL1_03851
Chromosome and associated proteins [BR:
pfp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PFL1_03851
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PFL1_03851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
PspAA
DUF4932
Motif
Other DBs
NCBI-GeneID:
19317958
NCBI-ProteinID:
XP_007879565
UniProt:
A0A061H6Q2
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MKFYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQ
KFHPASRKLIYCSRTVPEIEKALAELKRLMEYRARYNVPEGEESEVAKNEASGSNGPGDY
SIDMKGRGKAGGQMEDILALGLSSRKNLCIHPSVGRERKGKVVDARCRDMTSAWACEKGR
QDPGSVELCDFHEELGKMEPGQLIPQGVWTLEEVKEYSREKGICPYFAIRRMLPFVDIII
YSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAYRSINQL
SERVEEIKRTDAGKLQDEYARLVEGLAEQGDQREAETFMSNPVLPEDLLQEAVPGNIRRA
EHFVAFLKRFVEYLKTRMRVLHVVAETPPSFLQHLKDITYIERKPLRFCAERLRMLVSTL
ELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETEHATVPNPIFHFTCLDASLAIAP
IFERFSSVIITSGTISPLDMYPKMLKFDTVVQESYAMTLTRQCFLPLVITRGSDQVAISS
RFEVRNDPAVVRNYGSILIEYAKCMPDGIVAFFPSYLYMESIVAAWHDMGILDEVWKYKL
IFIETPDAPETSIALENYRRACDNGRGAILLSVARGKVSEGIDFDHNYGRAVIMFGVPYQ
YTESRILKARLEFLRDNFRIRENDFLTFDAMRHAAQCVGRVLRGKTDYGLMVFADKRFAR
ADKRAKLPKWIAQYITEPHSNLSTDMAIVESKLFIRTMGQPFPEGKNGVSLWDLSDIESR
QAKERETFERLMEGKLRIDSTGQVVEKGEGDDDDDEGDGGGGDDEDDDEDDEFDNAFGKG
EELAQIKELDDMDED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctacatcgacgagctgcccgtcctcttcccttatcccaaaatctaccccgag
caatatgcctacatgaccgatctcaagaggacgctcgacgccaacggccactgcgtcctc
gagatgccctcgggcaccggcaagaccgtgtctctgctgagcttgatcgtcagctaccaa
aagtttcatccggcgtcgaggaagctcatctactgctcgcgaaccgtgccagagattgaa
aaggcgctggcggagctcaagcggctgatggagtaccgggcgcgctacaacgtacccgaa
ggcgaagagtccgaggtggccaagaacgaggcctcgggctccaacggccctggcgactac
agcatcgatatgaagggccgcggcaaggcgggcggccagatggaggacatcctcgccctc
gggctcagcagccgcaagaacctctgcatccatccgagcgtcggccgcgagagaaagggc
aaggtcgtcgacgcacgctgcagggacatgacgagcgcctgggcgtgcgaaaagggcagg
caggaccccggcagcgtcgagctttgcgacttccacgaggagctgggcaagatggagcca
ggccagctgatccctcagggcgtgtggacgctcgaggaggtcaaggagtactccagggag
aagggcatctgcccctactttgccatccgaaggatgctgccctttgtcgacatcatcatc
tacagcttccactacctgctcgacccaaaggtcgccgagcaggtcagcaaggagatgagc
aaggacgccatcgtcgttttcgacgaggcccacaacattgacaacgtctgcatcgagtcg
ctaagcatcgacctgacgcggccgatgctggacagcgcgtaccgcagcatcaaccagctg
tccgagagggtcgaggagatcaagcggacggacgcgggcaagctgcaggacgagtacgca
cggctggtcgaagggctggccgagcagggcgaccagcgcgaggccgagacgttcatgtcg
aacccggtgctgcccgaggacctgctgcaggaggcggtgcccggcaacatccggcgtgcc
gagcactttgtcgccttcctcaagcgctttgtcgagtacctcaagacgaggatgcgggtg
ctgcacgtcgtggccgagacgccgcccagcttcctgcagcacctcaaggacatcacctac
atcgagcgcaagccgctgcgcttctgcgccgagcggctacggatgctcgtcagcacgctc
gagctgacgcggctcgacgagtattcggcgctgcaaaaggtggcggcgtttgcgacgctg
gtggccacctatgacaagggcttcctgctgatcctcgagccgttcgagaccgagcacgcc
accgtgcctaaccccatcttccactttacctgcctcgacgccagcctggctatcgcgccc
atctttgagcgcttctcgagcgtcatcatcaccagcggcaccatcagcccgctcgacatg
taccccaagatgctcaagtttgacaccgtggtgcaggagagctacgccatgacgctgacg
cgccagtgcttcctgccgctcgtcatcacgcgcggcagcgaccaggtggccatcagctcg
cgcttcgaggtgcgcaacgacccggccgtcgtgcgcaattacggaagcatccttatcgag
tacgccaagtgcatgccggacggcatcgtcgccttcttcccctcgtacctctacatggag
agcatcgtcgccgcctggcacgacatgggcatcctcgacgaggtgtggaagtacaagctc
atctttatcgagacgcccgacgcgcccgagacgagcatcgcgctcgaaaattaccgcagg
gcctgcgataacggacgaggcgccatcctgctctcggtcgcgcgtggcaaggtgtcggag
ggcatcgacttcgaccacaactacggccgcgccgtaatcatgtttggcgtgccgtaccag
tacaccgagtcgcgcatcctcaaggctcgcctcgagttcctgcgcgacaacttccgcatc
cgcgaaaacgacttcctgaccttcgacgccatgcgacacgccgcccagtgcgtggggcgt
gtgttgcgcggaaagaccgactacggcctgatggtgtttgccgataagcgctttgccagg
gccgacaagcgggccaagctgccaaagtggatcgcgcagtacattacggagccgcacagc
aacctctcgaccgacatggccattgtcgagtcgaagctctttatccggacgatgggccag
cccttccccgaaggcaagaacggggtgagcctgtgggatctgagcgacatcgagtcgcgc
caggcaaaggagcgcgagacgtttgaacggctcatggaaggcaagcttcgcatcgacagc
acgggtcaggtggtcgagaagggcgagggcgacgacgacgacgacgagggcgatggcggt
ggcggcgatgacgaagacgacgacgaggatgacgagtttgacaatgcgtttggcaagggc
gaggagctggcgcagatcaaggagctcgacgacatggacgaggattag
DBGET
integrated database retrieval system