Pseudozyma flocculosa: PFL1_03945
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Entry
PFL1_03945 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfp03041
]
PFL1_03945
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_03945
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFL1_03945
Spliceosome [BR:
pfp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PFL1_03945
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
Helicases
PFL1_03945
Pre-60S particles
PFL1_03945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
19318052
NCBI-ProteinID:
XP_007879659
UniProt:
A0A061H6X8
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAPAPTTSSAADAEAQLASQLAADVATAESAVASSSSTSKPAAVRQPFSSIDLSEPTRRA
LQEMKFETMTEVQARCIPPLMAGKDVLGAAQTGSGKTLAFLIPAIEMLHRLKFKPRNGTG
AIIISPTRELALQIFGVAKELMQHHNQTFGIIMGGANRKAEVDKLQKGVNLIVATPGRLL
DHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQSMLFSATQTTKVQ
DLARVSLRPGPLYINVHADLAASTVSRLEQGYVVCDSDRRFLLLFTFLKKNAGKKIIVFM
SSCNSVKYHGELLNFIDVPVLDLHGKQKQQKRTNTFFEFCNAPSGTLLCTDVAARGLDIP
KVDWIIQFDPPDDPRDYIHRVGRTARAGNAGKSLLFLLPSELGFLRFLKVAKVPLNEYTF
PSDKIANVQGQLEKLISKNYYLHQSARDGYRSYLQAYGSYSLKKIFDIHRLDLAKVGKAF
GFAVPPKVNISIGTGLKNTAPTNGKRKEVDADGDDDEAEAGAPADDEYNDKRQKVDRRSY
KGKDGQRGKGGKPSANAFRKKARDGKQWSR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgctcccaccacgtcgtcggcggctgacgcagaggcacagctcgcctcgcag
ctcgccgccgatgtcgccaccgcagaatccgccgtcgcctcttcgtcatcgacctcgaag
cccgcagctgttcgtcagccgttttcctcgatcgacctcagcgagcctacgcgccgcgcg
ctccaggagatgaagtttgagaccatgaccgaggtccaggcgcgctgcatccctccgctc
atggccggaaaggatgtcctcggcgcggcccagaccggctccggaaagacgctcgccttc
ctcatccccgccatcgagatgctccaccgcctcaagttcaagccgcgcaacggcacgggc
gccatcatcatctcgcccacccgcgagcttgcgctgcagatttttggcgtggcaaaggag
ctcatgcaacaccacaaccagacctttggcatcatcatgggcggcgccaaccgaaaggcc
gaggtcgacaagcttcagaagggcgtcaacctgattgtcgccacgccgggccgcctgctc
gatcacctgcagaacaccaagggcttcgtcttttccaacctcaaggcgctctgcatcgac
gaggccgaccgcatcctcgagatcggcttcgaggacgagatgcgccagattgtcaagatc
ctccccaacgacaaccgccagtcgatgctcttctcggccacccagacgacaaaggtgcag
gacctcgcccgcgtctcgctccgcccgggcccgctgtacatcaacgtccacgccgacctg
gccgcctcgaccgtctcgcgcctcgagcagggctacgtcgtgtgcgactcggaccgccgc
ttcctcctcctcttcaccttcctcaagaaaaacgccggcaagaagatcatcgtctttatg
tcgtcgtgcaactcggtcaagtaccacggcgagctgctcaactttatcgacgtccccgtc
ctcgacctgcacggcaagcagaagcagcagaagcgcacaaacacgtttttcgagttctgc
aacgcccccagcggcacgctgctctgcaccgacgtggccgcgcgcggcctcgacatcccc
aaggtcgactggatcatccagtttgacccgccggacgacccgcgcgactacatccaccgc
gtcggccggacggcgcgcgccggcaacgcgggcaagtcgctcctcttcctgctgccgtcg
gagctcggcttcctccgcttcctcaaggtggccaaggtgcccctcaacgagtatacgttc
ccctcggacaagattgcaaacgtccagggccagctcgagaagctcatctcgaaaaactac
tacctccaccagtcggcgcgcgacggctaccgctcctacctccaggcatacggcagctac
tcgctcaaaaagatcttcgacatccaccgcctcgacctggccaaggtcggcaaggccttc
ggcttcgccgtcccgccaaaggtcaacatctcgattggcaccggcctcaagaacacggcg
cccaccaacggcaagcggaaagaggtcgacgccgacggcgatgacgacgaggccgaggcc
ggtgcgccggccgacgacgagtacaacgacaagaggcaaaaggtggaccggcgatcgtac
aagggcaaggacgggcagcgcggcaagggcggcaagccgtcggccaacgcctttaggaaa
aaggcacgggacggcaagcagtggagccgttga
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