Pseudozyma flocculosa: PFL1_03984 Help Entry PFL1_03984        CDS       T03141                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pfp  Pseudozyma flocculosa Brite KEGG Orthology (KO) [BR:pfp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pfp03021]     PFL1_03984 Enzymes [BR:pfp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PFL1_03984     5.6.2.5  RNA 5'-3' helicase      PFL1_03984 Transcription machinery [BR:pfp03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      PFL1_03984 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 UvrD-helicase Viral_helicase1 AAA_30 UvrD_C_2 Motif Other DBs NCBI-GeneID:  19318091 NCBI-ProteinID:  XP_007879698 UniProt:  A0A061HDH8 LinkDB All DBs Position Unknown AA seq 2145 aa AA seqDB search MDATGSASASASASMSRPAAPTAFTVADHVHHVRERQTDVDAFANLITQALLYVDHGAGK KVHPFCSTGGPPDFELHSSMLRCFGFRAKDEVETWQRKVAHAIYGGGCVACYQGYLRARV RLRTAYLDAFPADKIDGLLDLIDAWEQDLALDALKRKGIAPGTGLAALSPAETYAVLSLV ASDRAQQLRQQVKAALTTQQLPALTELPAGLLVLAVDDDPTARAFAARQMIHLKPLTTPM AENPVFDRAIAAVASKLNDAGYGMDWSTVPMILRVLPRSAAALTPAILNHVHDRGAHLPD VLRAYTALLKQRGPAIWQDLHGRVGNDGGDDEYPTLVLSGILDNPFFTQPLLQHPKDAPV DARQRTLYFSWMGSHLASLRHAEQDIQGPHYVEALKRLANFLFERMQQGHVPNAYRSVSL KEAVDLVLNHADERSSRDVVDLYAPTIASMALGKGAPDADTRAAARDLMRQAFERDAKAL VAASEALAALTVKYTGVYKLHSRARRDPKVAATMEVLSPGDIYKQAMRDGYPSLSICSEL WHEAYSALETHSGGEAYAVFLQALAPISVYMAPSASTHLLREADGHGAAFEAYAARVKAS VASISKALATMRGGLADKLTDFGELATEDDAQSLCVGSVHSLLLLNLCPDVEVHKSAQNL LRQAFPDVQTRADCFRVLLQINTSQALRGLVDFLHAFVSATTKLVEANDLAKWMVRSFAN ILSVLCDGTDGLLCASTPGSLVEDRGKRQSVALKLPALWQAMCRSVSSIFRKTPQWSTLL AREDMVAWFRDVTIFASEMVDALSVFRPLVSPAGDADDRDLDSSDEDAMTLALAQPLESA ISWLRMNDQEILTETRGYIERALERFARDAVDFPADSKRKLLDFINQQLAIDDPKLRHTL LSDEELGKLKQLVDPPIEISDSDDDGGGAGSLDSDGESAGSELGRDKNKVRESSRPIIDS SHWWSSAGLYGTSLTSSQGRKKKQQQQQQQKLQKKKLKQQKLSFANVPPSKIIDVDAAYS GDAKAPSKSKAAAAPPKAPAAPINAYKGAAARAAQQAGTKASSAASASRSAVPKAGTGKL AQLRQELGTSRSWRPQNVNARPPAAPARSVKDGEAGTLQSSSVTGVAGGKTTAAGKPNGA TASSASSSSSDDSSDEEAEAKGLAALSKRRSPLRPRMPLQPQPRRQIKVLEDPAISRAKQ ERQEAERKRLLRSAPDYSALHRSILAWDYYHEGQRPPVPAGKEPAYRMVPSLLANAAEYG QVFGPLLLLECWAQFQQAREEADSVPDRTTVEVVGRATVDQFVDLNATIVPAAVPKTFSL NETEVVRLKELYPPPGRRPRTMLAKVQAFKRHPQGHLVTLRCCLIEDKQGINSNLTARTK WELTKLFSLTTLHREFAALMTAAYFDLFQNVLAARVSPKAPLSAEKVQHAMNGYQVNEPQ ARAILGSLATPGFSLIQGPPGTGKTKTICALIGAFISTRKGTATSAGGGGGGSAAGGPCK KILLCAPSNAAIDEVAKRAKAGMRNAEGKTIYPRVVRLGREEGINVAVKDISLDHLIEQR LSNKAARDQDKPAPVDPSILHAEIHALKKQREDKQAELSAVQNNPALATQLQAEIRNLAA KRLAVMSKLDEAKDRAQTEYRQQEADRRKARTEILADADVICSTLSGAGHEMLNSLPFDF ETVVVDEAAQAVELSTIIPLRYGCKQCILVGDPNQLPPTVISQQAEQLRYSQSLFVRMFE RSPDDVYLLSIQYRMHPEISVFPSATFYGSKLKDGPNMAQLTTQPWHRYELTRPFKFFST KAAEMPGRAHSLINREEANVALAIYERLRQDYPQTDLDYRVGIVTMYKAQLFELKRTFAA RYGQDIHHTIDFNTVDGFQGQEKDIIILSCVRSSGEARSIGFLGDRRRVNVAITRAKSNL FVVGNADHLSRSDPLWQQLVATARERQALQNVTVATFTKTSKTVLAKVAPPEPMPSAGSR APPPGGARPGGVPTVRPRPVSGSSATGAGAGSTPSGPKASPRAMAQQSQPQPQPQPQRQG LPARPRPPPPVASSSSSPANGRPNGTGNGAAPPGDPKKRKGIIVRDEVPDVLAAKKRKAT DADGISYGVPAGQAGRPNPPPPAGAAAPVPPSDAALNSLFVKKRR NT seq 6438 nt NT seq  +upstreamnt  +downstreamnt atggacgccaccgggtcggcttcggcctcggcctcggcctcgatgtcgcgccccgccgca cccaccgccttcaccgtcgcagaccacgtccaccacgtccgcgaacggcagaccgacgtc gacgcctttgcgaacctcatcacccaggcgctcctctacgtcgaccacggcgccggcaag aaggtccaccccttttgctccaccgggggcccgcccgactttgagctgcacagtagcatg ctccggtgctttggcttccgcgcaaaggacgaggtggagacgtggcagcgcaaggtcgcc cacgcaatctacggcggcggctgcgtcgcctgctaccagggttacctccgcgcccgtgtc cgcctccgcaccgcctacctcgacgccttccccgcggacaagatcgacggcctcctcgac ctcatcgacgcctgggagcaggatctcgccctcgacgccctcaagcgcaagggcatcgcc ccgggcaccggccttgccgccctctcgcccgccgaaacctatgctgtcctctccctcgtc gcctcggaccgcgcacagcagctccgtcagcaggtcaaggccgccctcaccacccagcaa ttgcccgcgctcaccgagctgcccgccggcctcctcgtcttggccgtcgacgatgacccc acggcgcgtgcctttgccgctcgccagatgatccacctcaagccgctcaccacgcccatg gccgagaaccccgtctttgaccgcgcaatagcggcggtcgcctccaagctcaacgatgct ggctacggcatggactggtcgaccgtgcccatgatcctgcgcgtgctgcccaggtccgcg gcagccctgacgcctgccatcctcaaccacgtccacgaccgcggtgcgcacctgcccgac gtcctccgcgcctacaccgctctgctcaagcagcggggccccgccatctggcaggacctc cacggccgcgttggcaatgatggcggcgacgacgagtatcccaccctcgtcctgtcgggc atcctcgacaaccccttcttcacccagccgctgctgcagcaccccaaggacgcgcccgtc gacgcccggcagcgcaccctctacttttcctggatgggctcccacctcgcctcgctcaga catgcggagcaggacatccagggcccgcactacgtcgaggcgctcaagcggctcgccaac tttctgttcgagcgcatgcagcagggccacgtccccaacgcctaccgcagcgtctcgctc aaggaggccgtcgatctcgtcctcaaccatgccgacgagcgcagcagccgcgacgttgtc gacctctacgcgcccaccatcgcctcgatggcgctcggcaagggtgcgcccgacgccgac acccgcgccgcagcccgcgacctgatgcggcaagcgtttgagcgcgatgccaaggccctc gtcgccgcctccgaggcgctggcggcgctgaccgtcaagtacacgggcgtctacaagctc cactcgcgcgcgcgccgggaccccaaggtggccgccaccatggaggtcctgtcgcccggc gacatctacaagcaggcgatgcgcgacggatacccctcgctgtcgatctgctccgagctg tggcacgaggcctacagcgcgctcgagacgcactccggcggcgaggcctacgccgtcttt ctgcaggcgctcgcgccgatctcggtctacatggccccctcggcctcgacccacctgctg cgcgaggccgacggccacggggccgccttcgaggcctacgccgcgcgcgtcaaggcgtcg gtcgcctcgatctccaaggcgctcgccacgatgcggggcggcctggccgacaagctgacc gactttggcgagctggccaccgaggacgacgcgcagtcgctctgcgtcggctccgtccac agcctgctgctgctcaacctgtgcccggacgtcgaggtgcacaaatcggcgcagaacctg ctgcggcaggcgttccccgacgtgcagacgcgcgccgactgttttcgcgtcctgctccag atcaacacgtcgcaggcgctccgcgggctggtcgacttcctccacgcctttgtctctgcg acgaccaagctggtcgaggccaacgacctggccaagtggatggtgaggagcttcgccaac atcctctcggtgctgtgcgacggcaccgatggcctgctgtgcgcgagtacacccggctcg ctcgtcgaggaccgcggcaagcgccagtcggtggcgctcaagctgccggccctctggcag gccatgtgccgcagcgtgtcgtccatcttccgcaagacgccgcagtggtcgacgctgctg gcgcgcgaggacatggtggcctggttccgcgacgtcaccatctttgcttccgagatggtc gatgcgctcagcgtcttccggcccctcgtcagcccggccggcgacgccgacgaccgcgac ctcgactcgtcggacgaggacgccatgacgctggcgctggcgcagccgctcgagagcgcc atcagctggctgcggatgaacgaccaggagatcctcaccgagacgcgcggctacattgag cgggcgctcgagcgctttgcgcgcgacgccgtcgactttccggccgactcgaagcgcaag ctgctcgactttatcaaccagcagctggccattgacgaccccaagctgcggcacacgctg ctgtcggacgaggagctcggcaagctcaagcagctcgtcgatccgccgatcgagatcagc gacagcgacgacgacggcggcggcgccggcagcctcgactcggacggcgagtctgcgggg tccgagctcggcagggacaagaacaaggtgcgcgagtcttcgaggccgatcatcgacagc tcccactggtggagctcggccggcctgtacggcacatcgctcaccagcagccagggccgg aaaaagaagcagcagcagcagcaacagcagaagctgcaaaagaagaagctcaagcagcag aagctcagcttcgccaatgtcccgcccagcaagatcatcgacgtcgacgccgcctacagc ggcgacgccaaagcgccctcaaagtccaaggctgccgctgcgccgcccaaggcacccgcg gccccgatcaacgcctacaagggcgccgcggccagagcggcccagcaggccggcaccaag gcatcgagcgccgcctctgcatcgcggtccgccgtacccaaggccggtacgggcaagctg gcccagctgcgacaggagctcggcaccagccgctcgtggcgtccgcagaacgtcaatgcc cgcccgcctgccgcgccggcgaggagcgtcaaggacggcgaggccggcaccctgcagagc agctccgtcaccggcgtcgcgggcggcaagacgaccgccgccggcaagccaaacggtgcg accgcctcgtcggcctcttcgtcgtcgtcggacgacagcagcgacgaagaggccgaggcg aagggcctggcggccctcagcaagcggcgatcgccgctgaggccgcgcatgccgctgcag ccccagccgaggcgacagatcaaggtgctcgaggatccagccatcagccgggccaagcag gagcggcaggaggccgagcggaagcggctgctgcggagcgcgccagactatagcgcgctt caccgcagcatcctggcgtgggactactaccacgagggccaacgccctcctgtgcccgcg ggcaaggagcccgcgtaccggatggtgccgtcactgctggccaatgccgccgagtacggc caggtatttggcccgctgctcctgctcgagtgctgggcccagttccagcaggcgagggag gaggccgacagcgttccggaccgcacgacggtcgaggtcgtcggccgcgccaccgtcgac cagtttgtcgacctcaacgccaccatcgtgcccgccgcggtccccaagacgttctcgctc aacgagaccgaggtggtgcggctcaaggagctctacccgccgcccggacgccggccgcgg acgatgctggccaaggtgcaggcgttcaagaggcacccgcagggccacttggtcacgctg cggtgctgcctgatcgaggacaagcagggcatcaactcgaacctgacggccaggaccaag tgggagctcaccaagctcttttcgctcaccacgctccaccgcgagtttgcggcgctgatg acggccgcctactttgacctgtttcagaacgtgctggcggcgcgggtgtcgcccaaggcg cccctgagcgccgaaaaggtgcagcacgcaatgaacggctaccaggtcaatgagccgcag gcgagggcgattctgggctcgctcgccacgcccggattttcgctgatccagggcccgccg ggaacgggaaagaccaagacgatctgcgcgctgatcggcgcctttatctcgacgcgcaag gggaccgccacctcggcgggcggcggcggcggcgggtcggcggcgggcgggccgtgcaag aagatcctgctgtgcgcgccgagcaacgccgccatcgacgaggtggccaagcgggccaag gcgggcatgcgcaacgccgagggcaagaccatctacccgcgcgtcgtccgcctcggccgc gaggagggcatcaacgtggcggtcaaggacatttcgctcgaccacctcatcgagcagcgg ctgagcaacaaggcggcgcgcgaccaggacaagccggcgcccgtcgacccgagcatcctc cacgccgagatccacgcgctcaagaagcagcgcgaggacaagcaggccgagctgtcggcc gtccagaacaatccggcgctcgccacgcagctgcaggccgagatccgcaacctggcggcc aagcggctggcggtcatgtcgaagctcgacgaggccaaggaccgcgcccagaccgagtac cggcagcaggaggccgaccggcgcaaggcgcgcaccgagatcctggccgacgccgacgtc atctgctcgacgctgtcgggggcgggccacgagatgctcaactcgctgcccttcgacttt gagacggtcgtcgtcgacgaggccgcccaggccgtcgagctgagcaccatcatcccgctg cgctacggctgcaagcagtgcatcctcgtcggcgaccccaaccagctgccgcccaccgtc atctcgcagcaggccgagcagctgcgctactcgcagtcgctgtttgtccgcatgtttgag cgctcgcccgacgacgtctacctgctgagcatccagtaccgcatgcaccccgagatttcc gtcttcccctcggccaccttttacgggtccaagctcaaggacgggcccaacatggcgcag ctgacgacgcagccgtggcaccggtacgagctgacgcggccgttcaaattcttttccaca aaggccgccgagatgcccggccgcgcccactcgctcatcaaccgcgaggaggccaacgtg gcgctggccatctacgagcgcctgcggcaggactacccgcagaccgacctcgactaccgc gtgggcatcgtcaccatgtacaaggcgcagctgtttgagctcaagcgcacgtttgccgcg cgctacggccaggacatccaccacacgatcgactttaacacggtcgacggcttccagggc caggaaaaggacatcatcatcctcagctgcgtgcgttcgagcggcgaggcgcgctcgatt ggcttcctcggcgaccgccgccgcgtcaatgtcgccatcacgcgcgccaagagcaacctg ttcgtcgtgggcaatgccgaccacctgagccgcagcgatccgctgtggcagcagctcgtg gcgacggcgcgggagcggcaggctctgcagaatgtcacggtggccacgtttaccaagacg agcaagacggtgctggccaaggtggcgccgccagagccgatgccgtcggccggatcgcgg gccccaccaccggggggagcgcggcctggtggcgtgccgacggtgcggccgaggccggtc agtggctccagcgcgaccggggccggggctgggtcaacaccgtcgggtcccaaggcgtcg ccgagggccatggcgcagcagtcgcagccgcagccgcagccgcagccgcagcgacagggg ctccccgcacgccctcgtcctccacctccagtggcgtcgtcgtcgtcgtctccggccaac ggcaggccgaatggcacgggcaacggcgcagcgccgccgggcgatccgaagaagcgcaag ggcattattgtgcgcgacgaggtgccggacgtgctggcggcgaagaagcgcaaggcaacg gatgccgacggcatctcgtacggcgtcccggcgggtcaggctggccggccgaacccaccg ccgccggcgggcgccgcggcgccggtgccgccgtcggatgctgcgctcaactcgctgttt gtcaagaagcgccgatga

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