Pseudozyma flocculosa: PFL1_03990
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Entry
PFL1_03990 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PFL1_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_03990
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PFL1_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D2
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D4
GIP1_N
G-alpha
Motif
Other DBs
NCBI-GeneID:
19318097
NCBI-ProteinID:
XP_007879704
UniProt:
A0A061H716
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MSRHRAVRNLNLEEELAEDDYYSDEDPYENISSDDQYALAEALSQALSVLGPSENSGISE
REIKDALWDSYFDVDSAVNHLVEEKSKREAKLEKDRQKAADPAGTSTSADTPLSELQRLS
LRSRQASPSDSPSRGRGGGRGALGSKAMGLAGLGRGGRSSMAKRNLADLAPPQLRSSPAF
RGEAIDGATPSSETAGSAPVKPTSKLSALAMKSNAARNANNKRPMEEAARGPVAPGANVS
AAGSSAEAPSASRPSKLAALAAARANPGSPRRSPVPERSDPTASATLPPAPVPAAATADT
GKPLSKLQQKMAAARQAKAANSEKGSAPKGDAMDVDTFPAASDGPLPTCYGSDIAVDALF
PHAAQRSTATSSLATAPSQPGLLAEASCLGSGPSGQFQVAGPFPPTRAVPGGSPFDIFVG
ASAPAALAQPPLAGEGQIEGLRKAFAGPSPDDVVLKAREAAKKAAAAASATNSGASTPLR
KKAAVGQAAKAASSGASSARNGSAANVSQLRTDIEAMGLGSQLPPAAKDGSMGSSVQGSS
AGGAGSLATTPKVGIAHERIVEEYRKREKEGKSELSLVVVGHVDAGKSTLMGRMLLELGT
LSDREYSANERASKKIGKGSFAYAWALDSSEEERERGVTIDVAQDHFSTPHRQFTLLDAP
GHRDFIPNMISGAAQADSALLVIDSIHGAFEAGFGPNGQTREHALLVRSLGVQQVVVVVN
KLDAVGYSQERYDEIVSKLQPFLRGCGFDEAKTRFVPCGGSVGENLAVRDEGGELGAWYD
GPTLVEVLDTLEPPRRNLDGPLRLPVTNVFKGQTAIASGVGVSGRVVSGIVQIGDRLRAV
PGDESGIVRAIEVDSDSVPWAVAGNNVTVYLSNIDVIQIAVGSVLCPSNAADVVELCDTF
TAQLLVFTPTYPLVQGTAVEVFHHSAEVPGKLVELLETRDKSTGHVIKRHPRVLSRGTTA
LCRIEVRSGGGAGKRSGVPIESVDKCKDMARILVRRDGETVAAGIVVETHPAAPAGA
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcaccgcgcagtacgcaacctcaacctcgaagaggagcttgccgaagacgac
tactactcggacgaggatccttacgaaaacatctcgagcgatgaccagtacgccctggca
gaggccctctcgcaggcactctcggtcctcggcccatccgaaaacagcggcatctcggag
cgcgagatcaaagacgctctgtgggactcgtactttgacgtcgactcggccgtcaaccac
ctcgtagaggaaaagagcaaaagagaggcaaaactcgaaaaggaccgccaaaaagcagcg
gatcccgcaggcacatcaacgagtgccgacacgcccctctcggagctccagcggctgtcg
ctgcgcagccggcaagcgtctcccagcgactctccgagcagaggccgtggcggtggccga
ggagcgctcggatccaaggccatgggcctggccgggctcggccgcggcggtagatcgagc
atggcgaagcgcaaccttgccgacctcgctcctccccagctgcggtcctccccagccttc
cgtggagaggcaatcgacggcgccacgccgagctccgagacggctggatccgcgcccgtc
aagccgacgtcgaagctatccgccttggcgatgaagtccaacgcagccagaaacgccaac
aacaagaggcccatggaggaggctgctcgcgggccagttgctcccggcgcgaatgtcagc
gccgccgggtccagcgcagaagcgccgtcggcgtcgcggcccagcaagctggctgccctt
gccgctgcgagagcgaatcccggttcacctcgccgctcccccgtccctgagaggtccgac
ccgacggcatcagccactttgccgcctgcacccgtccctgccgccgccacagcagacacg
ggcaagccgctctcgaagctgcagcagaagatggccgcagctcgtcaagcgaaagcagcc
aatagcgaaaagggcagcgcaccaaagggtgacgccatggacgtcgacaccttccctgct
gcatccgacgggcctctgccgacttgctatggctcggacatcgccgtcgatgccctcttt
ccccacgcggcccagcgcagcaccgcgacgtcgtcactggctactgcgccatcgcagccc
ggtctcctcgccgaggccagttgtctcggatccgggccatctggccagttccaagtggcc
gggccgtttccaccgacgcgagcagtccctggcggctcgccgtttgacatatttgtcggt
gcctcggctcctgcggctttggcccagcctccgctagccggcgagggccagatcgaaggg
ctgcgcaaggcctttgccgggcctagccccgacgatgtcgtgctcaaggcgcgcgaggca
gccaaaaaggccgcggccgcggcgtcggccaccaactcgggagcatcgacgccccttcgg
aaaaaggcggccgtcggccaggctgccaaggcggcttcgtcgggcgcctcgagcgccagg
aacggcagcgcggccaacgtgtcgcagctccgcaccgacatcgaggccatggggctcggg
tcgcagcttccccctgcggcaaaagacggcagcatgggctcgtcggtgcagggcagcagc
gcggggggcgccggcagcctcgccacgacgcccaaggtgggcatcgcgcacgaacgcatc
gtcgaggagtaccgcaagcgcgaaaaggagggcaagtcggagctgagcctggtcgttgtc
ggccacgtcgatgccggcaagtcgacgctcatggggcgcatgctgctcgagctgggcacg
ctctcggaccgcgagtacagcgccaacgagcgcgcgagcaaaaagattggcaagggcagc
ttcgcgtacgcgtgggcgctcgactcgtcggaagaggagcgcgagcgcggcgtgacgatc
gacgtggcccaggaccacttcagcacgccgcaccgccaattcacgctactcgacgcgccc
ggccaccgcgacttcatccccaacatgattagcggcgcggcgcaggccgactcggcgctg
ctcgtcatcgactcgatccacggcgcgttcgaggccggcttcggccccaacggccaaacg
cgcgagcacgcgctgctggtgcgcagcctgggcgtgcagcaggtcgtcgtcgtcgtcaac
aagctcgacgccgtcggctacagccaggagcggtacgacgagatcgtgtccaagctgcag
cccttcctgcgcgggtgcggcttcgacgaggccaagacgcgcttcgtcccctgcggcggc
tcggtgggcgagaacctggcggtgcgcgacgagggcggcgagctgggcgcgtggtacgac
ggcccgacgctcgtcgaggtgctcgacacgctcgagccgccgcggcgcaacctcgacggc
ccgctgcggctgcccgtgaccaacgttttcaagggccagacggcgatcgcgtccggcgtc
ggcgtgtcgggccgcgtcgtgtcgggcatcgtgcagattggcgatcggctacgcgccgtg
ccgggcgacgagtcgggcatcgtgcgcgccatcgaggtcgactcggacagcgttccctgg
gccgtggcgggcaacaatgtgacggtgtacctgtccaacatcgacgtcattcagattgcc
gtcgggtcggtgctgtgtccctcgaacgcggccgacgtggtggagctgtgcgataccttc
acggcgcagctcctcgtcttcacgccgacctacccgctggtgcaggggacggcggtcgag
gtgttccaccattccgccgaggtgccgggaaagctggtcgagctcctcgagacgagggac
aagtcgacgggccacgtcatcaagcgccacccgcgcgtcctctcccggggcaccacggcg
ctgtgccgcatcgaggtgcgcagcggtggcggggcgggcaagaggagcggcgtgcccatc
gagagcgtagacaagtgcaaggacatggcgcgcatcctcgtccgccgcgacggcgagaca
gtcgccgctggcatcgtcgtcgagacccaccctgcagcgccggccggggcctaa
DBGET
integrated database retrieval system