Pseudozyma flocculosa: PFL1_04065
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Entry
PFL1_04065 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_04065
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
PFL1_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
Motif
Other DBs
NCBI-GeneID:
19318172
NCBI-ProteinID:
XP_007879780
UniProt:
A0A061H6H9
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MARPDGRPPRPRSKSAARSFTGRSESALSRRSSRTSFITAAGASVSDPAEPRSSFTADSV
TDGLRDDDDDDDDDDDSSSVSDSPEPRFAARRDSGESLHRSPPTSQDDATTLSTLEEPTP
QPQRIASKKQQSKLAPAPALAEAMASPRYSRDDRRFLSPSPTPRKSNAPARESRRFSKAS
HLTLPYERSEVGDYDYDDGRDRDRRSSTLRPSKSSSRISSQNLEPPFPDRRKSRSRSFTD
GGGDRSDSRLSRLAPPLPLGGQRASVRGSMLSGYAPSSPGSDRFSMRDGPMSPNRSLLSP
HQRSPRKKDRSDTASIATRTTARGAGRGAASIRSGVAGDGEGLASPTDKVLDPESHVFPG
TKIRKHIEPPLTDAMRSVLRQFGGRNMGDHGCNGYPIAVFVGATALDTGSVIHPHVSGGI
SLYFGAGHPKNMAVVLPDEDRIPRHIPNPKAPTPVSLSRRAELRAAVAALKTVFDLYRGR
ACAHICIDSAYVAKAWATWIPTWDAQGWPGEEEPEQWSRRRHRDDDDYRSDDDDYTSYSD
DDRGGRRRNQRRHRGDRRDGGYASEGGRGARYEDEQRRRRHREKGRRDDRDRDRPRDDWL
ADDPYGDRRQSRRPGGGGYASDRGSRRGGGSEGGRRRRRRHDDYSDDDDDYSDYDDRRSS
SRKRGSQRGGGGGRRTADDDRDDDRRRPGSKRRGGGKSTAAGATSRKLVDEDLLRELADI
RYEFALVEQKRIGSAHLYLIDRTHNPADRMARAVAKSEGGLLGATVDHGVGSASVLGDDD
DFVGDHARSPATARKVAADRMTLREDDDDFYYDETRSMAEHRVASRIRSRRSIDIESRRH
PMPSSGRASLDVGGKDRSSMSDDHRLSQASSVLASAARVRPTAKGRDANGSRLGGSALSV
YEEEDEDAADFDDDDGRLSTRTPPSRAELERDDYLARQAEREQVAGGTRSRLAPPSSGRF
RDALGSSRGSMDRRRFAASQPDLHEGSGGRRPLYADDGDDFDDRRSMMSSATGRERRGAS
SGVAGVGAGASRSRNLFPPSPSSARGSLDSRRTATLRSHHGPGLAPEEEGYDWDTRSTAS
STRRSFMGRRKKSAAPPNGADPRRPRDWRGKTAVDFEEELAASGRGEKKSGGIFGKLFGK
RR
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggccaggccagacgggcgaccgccgaggccgcgctccaagtctgcggcgcgcagcttc
acaggccggtccgaatccgccctcagccgccgttcctcgcgcacctcgttcatcacggcc
gccggcgcgtccgtcagcgatccggcagagccgcgcagcagcttcaccgccgactccgtc
accgacgggcttcgggacgacgacgacgacgacgatgacgacgacgactcttcaagcgtc
tcggacagcccggagccccgattcgcagcccgcagggattcgggcgagtcgctccaccgc
tcgcctccgacatcgcaagacgatgccaccacgctctcgaccctcgaggagcccacaccg
cagccgcagcgcatcgcctccaagaagcagcagtcgaagctcgcaccggcaccggctctg
gccgaggccatggcgagcccgcgctacagcagggacgaccgacgcttcctgtcgccctcg
cccactccgcgcaagtcgaacgcaccggccagggagagccgccgcttctccaaggccagt
cacctgacgctgccctatgagcgctccgaggtgggcgactacgactacgacgacggcagg
gaccgcgaccgccgctcctcgacgctgcgcccgagcaagtcgagctcccgcatcagctcc
caaaacctcgagccgccctttcccgaccgccgcaagagccgctcccgctccttcaccgac
ggcggcggcgaccgttccgactcgaggctcagcaggctggcgcctccgctgccgctcggg
ggccagcgtgcctcggtgcgcggctcgatgctgtccggctacgcgccatcgtcgccgggc
tctgaccgtttctcgatgcgcgacggtcccatgagccccaaccgctcgctcctctcgccc
caccaacgctcgccgcgcaaaaaggaccgcagcgacacggccagcatcgcgacccggacc
accgcccgaggcgcaggccggggtgccgcctcgatccgcagcggcgtcgccggcgacggc
gaaggcctggcctccccgaccgacaaggtcctcgacccggagagccacgtgttccccggt
acaaagatccgcaagcacatcgagcctccgctgacggacgcgatgcgcagcgtgctgcgc
cagtttggcggtcgcaacatgggcgaccacggctgcaacggctacccgatcgcggtcttt
gtcggcgcaaccgccctcgacacgggctccgtcatccacccgcacgtctcgggcggcatc
tcgctctactttggcgcgggccaccccaagaacatggccgtcgtgctgccagacgaggat
cgcatcccgcgccacattcccaaccccaaggcgcccactcccgtgtcgctctcgcgccgc
gccgagctccgagccgcagtcgcagcgctcaagacggtgtttgacctctaccgcggccgc
gcttgcgcccacatctgcatcgacagcgcctacgtcgccaaggcctgggccacctggatc
ccgacctgggacgcccagggctggccgggtgaagaggagcccgagcagtggagccgccgc
cgccaccgcgacgacgacgactaccgctccgacgacgacgactacaccagctacagcgac
gacgaccgcggcggacgcaggcggaaccagcgcaggcacaggggagaccgccgcgacggc
ggctatgccagcgaaggcggtcggggcgctcgctacgaggacgagcagcggcgccgccgt
caccgcgagaagggccgcagggacgaccgcgatcgcgatcgcccgcgcgacgactggctc
gccgacgacccctatggagaccggcgccagtcgcgcaggcctggtggcggaggctacgcc
agcgaccgaggctctcgccgtggaggcggaagtgagggaggcaggcgccgccgccgccgt
cacgacgactactcggacgacgatgacgactattccgattacgacgatcgcaggtcctcg
tcccgaaagcgcggtagccagcgcggaggcggaggcgggcgccgtaccgccgacgacgac
cgcgacgacgaccgccgccggcccggatccaagcgccgcggcggtggcaagtcgactgcg
gccggtgccacgagccgcaagctggtcgacgaggacctgctgcgcgagctggccgacatc
cggtacgagtttgcgctcgtcgagcagaagcgcatcggcagcgcgcacctctacctcatc
gaccgcacgcacaatccggccgaccggatggcgcgcgccgtggccaagagcgagggcggc
ctgctgggcgccaccgtcgaccacggtgtcgggtccgcctcggtcctgggcgacgacgac
gactttgtcggagaccacgcccgcagcccggcgaccgcccgtaaggtcgccgccgaccgc
atgacgctgcgcgaggacgacgacgacttctactacgacgagacgaggtcgatggccgag
caccgcgtcgccagccgcatccgctcgcggcgaagcatcgacatcgagagccggcgccat
cccatgccttcctcgggacgcgccagcctcgatgtcggaggcaaggaccgctcctcgatg
tccgacgaccaccgcctcagccaggccagcagcgtgctcgcctcggccgctcgggttcgg
cccacggccaagggcagggacgccaacggctctcgtctcggcggcagcgctctgtcggtc
tacgaggaggaggacgaagacgcggccgactttgacgacgacgacggccgcctttcgacc
cgcacgccgccttcgcgcgccgagctggagcgcgacgattacctcgctcgccaggcggaa
cgcgagcaggtggccggcggcacccgcagtcgccttgcacctccatcgtcggggcgcttc
cgagacgcccttggcagttcccgaggctcgatggaccgacgccgcttcgccgccagccag
ccggaccttcatgagggtagcggaggccgacgaccgctgtacgccgacgacggcgacgat
ttcgacgaccgccgctccatgatgtcgtcggccacgggccgggagcgtcgaggggccagc
agcggcgtggctggcgtgggtgcaggcgcctcgcgcagccgcaacctcttcccgccgtcg
ccgtcttcggcgcggggctcgctcgactctcggcgcacggccacgctgcgttcgcaccac
ggtccaggcctggcgcccgaagaggaggggtacgactgggacacgaggtcgacggcctcg
tcgacgcggcgcagcttcatgggccggcgcaagaagagcgccgcgccgcccaacggagcc
gacccgcgccggcccagggactggaggggcaagacggccgtcgactttgaagaggagctc
gccgcttcgggccgaggcgaaaagaagagcggcggcatctttggcaagctctttggcaag
cgacggtga
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