Pseudozyma flocculosa: PFL1_04104
Help
Entry
PFL1_04104 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_04104
03041 Spliceosome [BR:
pfp03041
]
PFL1_04104
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PFL1_04104
Spliceosome [BR:
pfp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
PFL1_04104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
AbpA-like
Motif
Other DBs
NCBI-GeneID:
19318211
NCBI-ProteinID:
XP_007879819
UniProt:
A0A061H5S5
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSVPAASSTSITPEMASGSLHHAAAAQPGTPRPYLYVGNLSPRVTDTMLHEIFSVAGPVQ
SVKIIPDRSFTQGGLSYGFVEYVDMRSAEAAVQTLDGRNIFDSEITVKWAKQSHHPSLQS
AEHSEREEGTGNYHVFVGDLSQDVTDAVLRQAFSGFPSLADVRVMFDMVTGKSRGYGFVS
FTTKADAEQSIATMNGEWLAGRAIRLNWAHAKSQGGIRVSSAATNTTTHPVIFGTAGMGM
GMAMPMAGGIGMAMPNGRQAMLGMPGMAGPMIRMAPGVAMPIQAFSPAVLGNVTTTTNGN
GHGTLHINGGAIALQQQQQLGQPLSYEQVLAATPPNVTTVYLGNLAPFTTQNDLMTLMAP
FGFVIEVRIQADRGYAFVKLDSHEHAANAVYSLGANGCSVHGRPVKVSWGKERNESASNT
AVIAANAAIGGSVNGQNGGYGNMGYGVQPAAQSYGFNAVNNNTTGSNHAHGSAFPQPTLP
NMTG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtacccgcagcgtcttcgacgtccatcacccccgagatggcgtctggcagcctc
caccacgccgccgctgcccagccgggaacgcctcgcccttacctctacgtcggcaacctc
agcccgcgggtcaccgacaccatgctgcacgagatcttcagtgtggccggccccgttcag
tccgtcaagatcatcccggaccgcagcttcacccagggcgggttgagctacggctttgtc
gagtacgtcgacatgcgctcggcggaggcggcggtgcagacgctcgacgggcgcaacatc
tttgacagcgagatcactgtcaagtgggccaagcagtcgcaccaccctagcctgcagagc
gccgagcactcggagagggaggagggcaccggcaactaccacgtctttgtcggagacctg
agccaggacgtcaccgacgccgtgctgcgccaggccttttcgggcttccccagcctggcc
gacgtgcgggtcatgttcgacatggtcaccggcaagtcgaggggctacggcttcgtcagc
ttcaccaccaaggccgacgcagagcagagcatcgccaccatgaacggcgagtggctcgca
ggccgcgccatccgcctcaactgggcgcacgccaagtcgcagggcggcatccgagtctct
tctgcggccaccaacaccaccacccatcccgtcatattcggcacagcgggtatggggatg
ggcatggcgatgcccatggccggcgggatcggcatggcgatgcccaacggccgccaagcc
atgctcggcatgccgggcatggcggggcccatgatccgcatggcgccgggcgtggcgatg
cccatccaggccttcagccccgccgtcctgggcaacgtcaccaccaccaccaacggcaat
ggtcacggtacgctgcacatcaacggcggcgccattgcgctgcagcaacagcagcagctc
ggccagccgctgtcctacgagcaggtcctcgcggcgacgccgcccaacgtgacgactgtc
tacctcggcaacctggccccgttcacgacgcagaacgacctgatgaccctaatggctccg
ttcggcttcgtcatcgaggtgcggatccaggcggatcgcgggtacgcctttgtcaagctc
gacagccacgagcacgccgccaacgccgtctactcgctcggcgccaacggatgctcggtg
cacggcaggcccgtcaaggtgtcgtggggcaaggagcgcaacgagtcggccagcaacacg
gccgtaatcgccgccaacgctgccatcggcggcagcgtcaatgggcagaacggaggctac
ggcaacatgggctatggcgttcagcccgccgctcaatcctatggcttcaacgccgtcaac
aacaataccacgggcagcaaccacgctcacggcagcgcctttccgcaacccacgctgccc
aacatgactggctga
DBGET
integrated database retrieval system