Pseudozyma flocculosa: PFL1_04178
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Entry
PFL1_04178 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFL1_04178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_04178
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
Pre-60S particles
GTPases
PFL1_04178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
EFG_IV
DUF6033
Motif
Other DBs
NCBI-GeneID:
19318285
NCBI-ProteinID:
XP_007879893
UniProt:
A0A061HCL8
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MASSSKKFTSHNVRCCTLIGHVDHGKSSFADSLLAANNIISARMAGQIRYLDSREDEQER
GITMEASAVSLSVKMRFHDPKQGWDPENLPPVEDFMINLVDTPGHVDFSSEVSTASRLCD
GALLIVDVVEGVCAQTITVLRQAWQDGLEPILVLNKMDRLITELKLSPYEAYHHLIQVIE
QVNAVMGSFFATARMDDDQRWHEEREKRIEERRLAKNDQTASEGDAAAAGAAVDDDEHYE
ERDDEDIYFDPAKGNVIFASAMDNWAFRLERFAMLYAKKMGIQEQKLRKVLWGDFYFDPK
AKRVIGHRQKEKEKRPLKPMFVQFVLENIWAVYDSVVENRDQERIEKIVNSLSLKIHPRD
LKSKDPATLIKAIFGQWLPLAGCAFAAIVYVIPPTSKAQQKRVPMMLNPDMNYFDRGNYV
AKTPLESDLMQAATGSDAHTVAYVSKMFAVKKEDLPEGKRTPLTADEMRQRAKESREKAS
AVRAALAATGATIDGADGEQNGDAPASAEPSSGTSLEEAGARRAERIREQQQRREEEEAA
AAKQAEEEGSDEVVLGFARLYSGTLRAGSWVYAVLPKYNAALPPSHPANSKHVRAVKLES
LYMMMGRDLLAVSEVPAGNVFAVRGLEGKVLRNATLCAPPLSQDYPFEERQSADEIDAKM
ARSTFVNLAGINLLSAPIVRVALEPANPSDMPKLVEGLKLLNQADPCVESLIQDSGEHVI
LTAGELHLERCLKDLRERFAKCEIQVSPPLVPFRETAVRGIEMPPPKTEGAARGTIDGSV
ANGLVSFRVRAVPLPKPVVEFLLANDQTIRRLQSRTSALAIEAEAADVEGGASIDAAGSS
ASKTVKVDRFWAALEDVLRKCGQDKTGEDWREIVERIWSFGPRRVGPNLLIDRTNVGGAA
ALHLRDRTDPHRLKDSRPASGIATPSAHRAAQAASSADKSAAETLAQALDAATLEDQPGD
AKIPINSTDMNESIDAGFQMATNAGPMCAEPMQGMAFFVEAVEIDKEEVSKEGARARLSQ
VAGSMISAVREVCRNGLLDWSPRLMLAMYSCDIQASTEVLGKVHAVLSRRRGRIISEEMK
EGTSFFTVGSLLPVVESFGFADEIRKRTSGAASPQLIFKGFEMFDLDPYWVPRTEEELED
LGEKGDRENVAKRYMDGVRKRKGMFVTQRIVEAAEKQRTLKSN
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcgtcgaagaagttcacctcgcacaatgtgcgctgctgcaccctcatcggc
cacgtcgaccacggcaaatcgtcgtttgcagactcgctcctcgccgccaacaacatcatc
tcggccaggatggccggccagatccgctacctagactcgagagaagacgagcaggagcgg
ggcatcacgatggaggcgtccgccgtctccctctcggttaagatgcgcttccacgatcca
aagcaaggctgggacccggaaaacctgccccccgtggaggactttatgatcaacctcgtc
gatacccccgggcacgtcgacttttccagcgaggtgtcgaccgcgtcccgcctctgcgac
ggcgcgctgctcatcgtcgacgtcgtcgagggcgtgtgcgcccagaccatcaccgtgctg
cgccaggcgtggcaggacggcctcgagcccatcctcgtcctcaacaagatggaccgcctc
atcaccgagctcaagctgtcgccctacgaggcctaccaccacctcattcaggtcatcgag
caggtcaacgccgtcatgggcagcttctttgccaccgcacgcatggacgacgaccagcgc
tggcatgaggagcgcgagaagcgcatcgaggagcggaggctggccaaaaacgaccagacg
gccagcgagggcgatgccgccgccgccggagccgccgtcgacgatgacgagcactacgag
gagcgcgacgacgaggacatctattttgacccggccaagggcaacgtcatctttgcctcg
gccatggacaactgggccttccgcctggagcgcttcgccatgctctacgccaaaaagatg
ggcatccaggagcagaagctgcgcaaggtgctctggggcgacttctacttcgaccccaag
gccaagcgcgtcatcggccaccgccaaaaggaaaaggagaagcggccgctcaagcccatg
tttgtccagttcgtcctggaaaacatctgggcggtctacgacagcgttgtcgagaaccgc
gaccaggagcgcatcgaaaagatcgtcaacagtctcagcctgaagatccaccctcgcgac
ctcaagagcaaggacccggcgacgctcatcaaggccatcttcggccagtggctgccgctc
gccggctgcgcgtttgccgccatcgtctacgtcatcccgcctacgtccaaggcgcagcag
aagcgcgtgccgatgatgctcaacccggacatgaactactttgaccgcggcaactatgtg
gccaagacgccgctcgagtcggacctgatgcaggcggccacgggcagcgacgcccacacc
gtcgcctacgtcagcaagatgtttgccgtcaagaaagaggacctgccagagggcaagcgg
acgcccctcaccgccgacgagatgcgccagcgcgcaaaagagagccgggaaaaggcgagc
gcggtgcgggccgccctcgccgccacgggagcgaccatcgacggcgccgacggggagcag
aacggcgacgcgcctgcttccgccgagcccagcagcggcaccagcctcgaggaggccggg
gcgaggcgggccgagcgcatccgcgaacaacagcagcgccgcgaggaggaggaggcggcg
gcggccaagcaggccgaggaggaaggctcggacgaggtcgtgctcggcttcgcgaggcta
tactcgggcacgctgcgtgccggatcctgggtctacgcggtgctgcccaagtacaatgcc
gcgctgccgccgtcgcacccggccaacagcaagcacgtccgggcggtgaagctcgagtcg
ctctacatgatgatggggcgcgacctgctggcggtcagcgaggtgccggcgggcaatgtg
tttgccgtccgcggcctcgagggcaaggtgctgaggaacgccacgctgtgcgcgccgccg
ctgtcgcaggactaccccttcgaggagcgccagtcggccgacgagatcgacgccaagatg
gcccgctcgacgtttgtcaacctcgccggcatcaacctgctctcggcgcccattgtccgc
gtcgcgctcgagccggccaacccttcggacatgcccaagctcgtcgagggcctcaagctg
ctcaaccaggccgacccctgcgtcgagagcctcatccaggactcgggcgagcacgtcatc
ctcaccgccggcgagctgcacctcgagcggtgcctcaaggacctgcgcgagcgcttcgcc
aagtgcgagatccaggtctcgccgccgctcgtgccgttccgggagacggcggtccgcggc
atcgagatgcccccgcccaagaccgagggcgcggcgcgcggcaccatcgacggctcggtg
gccaacgggctggtgtcgttccgcgtgcgcgcagtcccgctgcccaagcccgtggtcgag
ttcctgctcgccaacgaccagaccatccggcggctccagtcgcggacgtcggcgctggcc
atcgaggccgaggccgccgacgtcgagggcggtgcgtcgatcgacgccgccggctcgtcg
gcgtccaagacggtcaaggtcgaccgcttctgggccgcgctggaggacgtgctgcgcaag
tgcggccaggacaagacgggcgaggactggagggagattgtcgagcggatctggagcttt
ggcccgaggcgcgtaggcccgaacctgctcatcgacaggaccaacgtcggcggggcggcc
gcgctgcacctgcgggaccgcaccgatccccaccgcctcaaggacagccgaccggcttcg
ggcatcgccacgccttcggcccatcgggcagcgcaggcggcgtcgtcggccgacaagagc
gccgccgagacgctggcgcaggcgctcgacgccgccacgctcgaggaccagccgggcgac
gccaagatccccatcaactcgaccgacatgaacgagtcgatcgacgccggcttccagatg
gccaccaacgccgggcccatgtgcgccgagccgatgcagggcatggcctttttcgtcgag
gccgtcgagatcgacaaggaggaggtgtccaaggagggcgctcgagcgaggctgtcgcag
gtggcaggctcgatgatttcggccgtgcgcgaggtctgccgcaacggcctgctcgactgg
tcgccgcgcctcatgctcgccatgtactcgtgcgacatccaggcatcgaccgaggtgctg
ggcaaggtccacgccgtcctctcgcggcggcgcggccgcatcatctccgaggagatgaag
gaaggcacgtcgttcttcaccgtcgggtcgctgctacccgtcgtcgagtcgtttggcttt
gccgacgagatccgcaagcgcacctcgggcgccgccagcccgcagctcatcttcaagggc
ttcgagatgtttgacctcgacccgtactgggtgccgcgcaccgaggaggagctcgaggac
ctcggcgaaaagggtgaccgcgagaatgtcgcgaaacgctacatggacggcgtccgtaag
cgcaagggaatgtttgtcacgcaacgcatcgtcgaggccgcggaaaagcagcgcaccctc
aagtccaactga
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integrated database retrieval system
