KEGG   Pseudozyma flocculosa: PFL1_04179
Entry
PFL1_04179        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PFL1_04179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfp03041]
    PFL1_04179
Spliceosome [BR:pfp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PFL1_04179
 Complex C
   U5 SnRNP specific factors
    PFL1_04179
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Vps41 Cytochrom_D1 Ge1_WD40 Beta-prop_WDR19_2nd Beta-prop_IFT122_2nd RMC1_N KNTC1_N TAF1C_beta-prop DUF7165 CFAP43_N
Other DBs
NCBI-GeneID: 19318286
NCBI-ProteinID: XP_007879894
UniProt: A0A061H5Z4
LinkDB
Position
Unknown
AA seq 375 aa
MADKRKSPPPASTTQHSLIKRQRHDDGSASDAHKQIAIASSNDGSNKGLVRTVKRTSSLS
SPILGLTGAHGQEILDVRFSPDGATIAAAAADRTISIWNTYGNNENIGQLLGHSKAVTCL
CFSTTTPGTLYSGSADGTLISWSLKTGEKQRRLRGHRGIVNSIASTRSGTEILVSGGDDG
RVMLWDPQDKQALDVLNVGYPVTAVAFSDDASQVYVGGLDNDIHIYDLSRKQIVFSLRGH
LDTITSIALSPSGSHLLSTSFDDTLRIWDVRPFAPEPAPGAENAANPRLHRTLRGTTFGG
FENLLVKAGWSSDGEKVVAGGADRTCTIWDVESSAILYKLPGHRGTCTAAAYHPKEPIVV
SCSTDMTILLGEIDP
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggccgacaagcgcaagtcgcctccgccggcctcgaccacccagcactcgctcatcaag
cgtcaaaggcacgacgacggcagcgcatcagacgcacacaagcagatcgccatcgcctcg
tccaacgacggctccaacaagggcctcgtacgcaccgtcaagcgcacatccagcctctcg
agccccatcctcggcctcaccggcgcacacggccaagagatcctcgacgtccgcttctcg
cccgacggcgcaaccatcgcagccgccgcagcagaccgcacaatctcgatatggaacacc
tacggcaacaacgaaaacatcggacagctcctcggacactccaaggccgtcacgtgcctc
tgcttctcgaccaccacgcccggcaccctctactcgggctcggcagacggcaccctcatc
agctggtcgctcaagacgggcgagaagcagcgccgcctccgcggccaccgcggcatcgta
aactcgatcgcctcgacgcgctcgggcaccgagatcctcgtcagcggcggcgacgacggc
agggtgatgctctgggacccacaggacaagcaggcgctcgacgtcctcaacgttgggtac
cccgtcaccgccgtcgccttttccgacgacgccagccaggtctatgtcggtgggctggac
aacgacatccacatctacgacctctcgcgcaagcagatcgtctttagcctccgcggccac
ctcgacaccatcacctcgatcgccctcagcccgtccggatcccacctcctctcgacgtcg
tttgacgacacgttacgcatctgggacgtgcgcccctttgcgcccgaaccggcacccggc
gcagaaaacgccgccaacccgcgcctccaccgcacgctgcgcggcaccacgtttggcggc
ttcgagaacctcctggtcaaggcgggctggagcagcgacggcgaaaaggtcgtcgccggc
ggcgcggatcggacgtgcaccatctgggacgtcgaatcttcagccatcctctacaagctg
cccggccaccgcggcacgtgtacggcagcggcgtaccatccaaaagagccgattgtcgtc
tcttgctcgaccgacatgacgatcctcctcggcgagatcgacccataa

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