KEGG   Pseudozyma flocculosa: PFL1_04215
Entry
PFL1_04215        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K18716  nucleoporin NUP42
Organism
pfp  Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfp03019]
    PFL1_04215
Messenger RNA biogenesis [BR:pfp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PFL1_04215
SSDB
Motif
Pfam: zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_2 Nucleoporin_FG Torus
Other DBs
NCBI-GeneID: 19318321
NCBI-ProteinID: XP_007879929
UniProt: A0A061H6Z8
LinkDB
Position
Unknown
AA seq 618 aa
MVVCKFFQQGRCAYGNNCKFEHPQGNRSATFGQSSFAASPSAFGSTSGPSAFGGGGGANR
PSAFGAPSAFGASAAPSAFGSTSAFGSAPRPGGSAFGSVAGGAGAPSAFGSSTGAPSAFG
GSTAAPSSFGGGGTATTGSAFGAPSAFGAKPGGGASAFGAPSAFGSTSAPTSAFGATAPS
AFGSTPVAAGSSAFGGRAAGPSASAQGKMADPNDPQVTLMPQGIAEDLGPHGRPLWKLTV
YGPARGEPNLVGGQDLSQEELRLMAYTARAQGQEAAYSQHEQTLVQQAEAAFRPLFANTN
QACQQAQRNRTEYNRTRAANQGSAFGGASAAATPSAFGSTSTPSAFGAPSAFGAKPATTA
TSTTSAFGSTAAPSAFGTPSAFGASTTAPTASAFGAPSAFGSSKPPSAFGALAPSSTAAT
PSAFGSTATPSAFGQASAFGAPSQASAFGGGTSAFGQASAFGSSTTAGAATTTPAATTGG
SAFGSTAAPSAFGAPSAFGATGQGQTSAFGAPSAFGSAPAAPATTSAFGSTSVFGTGTTS
AFGGSAGGFGGGGAAATTAPTSAFGAAGAASTAKVEQDPYAVFAPKIEDLTDAVLESFKS
ERFAWGMVPLIEPPVDVR
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggtcgtctgcaagttcttccagcagggccggtgcgcctacggcaacaactgcaagttt
gagcatcctcagggcaatcgatccgcgacatttggccaatcctcgttcgctgcctcaccc
tccgcgttcgggagcacatcgggcccgtctgcctttggcggcggcggcggcgcaaaccgc
ccctcggcattcggcgctccctccgcctttggagcgtccgccgcgccgtccgccttcgga
agcacctctgcgtttggctcggccccgcggcccggaggatccgcctttggcagcgtagca
ggcggtgcgggggcgccttcagcctttggcagcagcaccggtgccccttcggcctttggc
ggcagcaccgcagccccctcttcctttggaggaggcgggacagcgacgaccggatcggcc
tttggagcaccaagcgcctttggagcaaagccaggcggcggcgcatcggcgttcggagcg
ccctctgcctttggcagcacctcggcgcccactagcgcctttggagccactgctccttca
gctttcggatccacacccgtcgccgcggggagcagcgccttcggtggccgagcagcgggc
ccgagcgcatcagcgcagggcaagatggccgaccccaacgatcctcaggtcacgctcatg
ccgcaggggattgcagaggaccttgggccgcatggcagaccgctttggaagctcaccgtc
tacgggccggccagaggcgaaccgaacctcgtcggcggccaggacctcagtcaggaggag
ctgaggctcatggcctacacggctagagctcagggacaggaggctgcctattcgcagcac
gagcagacattggtacagcaggccgaagccgcctttcgccctctcttcgcaaacaccaac
caggcctgccagcaggcccagcgaaaccgcacagagtacaatcggacccgggcagccaac
cagggaagcgcattcgggggtgcctccgccgcagcgacacccagcgcgttcgggtcgacg
tcgacaccgagtgcctttggcgcaccctcggcattcggcgccaaaccggcgacgacggcc
acaagcacaacgagcgcttttggctctacggcggcgcccagcgccttcggtacgccgtcg
gcctttggcgcgtcgacgacggctccgaccgcttcggcatttggcgccccgtccgcgttt
ggatcgtcgaagccgccatcggcgtttggagcccttgccccgtcgagcacggcagcgacg
ccatcggcgttcggctcgacggcgacgccgagtgcgttcggacaggcgtctgcctttggc
gcaccttcgcaggcctctgcattcggcggggggacgagtgcgttcggccaggcttcggcc
tttggctcctccaccaccgccggcgccgccacgaccacgccagcagcaacgacgggcggc
tcagcgtttgggtctaccgcggcgccgagcgcatttggtgccccctcggccttcggtgct
accgggcaggggcagacgagtgcattcggcgcgccctccgccttcggatccgcaccagcc
gcgccagcgacgacgtccgcgttcgggagtacgagcgtattcgggacggggacgacgagc
gcgtttggcggcagcgccggcggtttcggcggcggcggcgcagcggcaactacggcacct
acctctgcattcggcgcagcgggggcggcgtcgacggccaaggtggaacaggatccgtac
gctgtgttcgcacccaagatcgaggacctgacggatgcggtgctcgagagcttcaagagc
gagcggttcgcgtggggcatggtcccgctcatcgagccgcccgtcgatgtacgatga

DBGET integrated database retrieval system