Pseudozyma flocculosa: PFL1_04215
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Entry
PFL1_04215 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_04215
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFL1_04215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Nucleoporin_FG
Torus
Motif
Other DBs
NCBI-GeneID:
19318321
NCBI-ProteinID:
XP_007879929
UniProt:
A0A061H6Z8
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MVVCKFFQQGRCAYGNNCKFEHPQGNRSATFGQSSFAASPSAFGSTSGPSAFGGGGGANR
PSAFGAPSAFGASAAPSAFGSTSAFGSAPRPGGSAFGSVAGGAGAPSAFGSSTGAPSAFG
GSTAAPSSFGGGGTATTGSAFGAPSAFGAKPGGGASAFGAPSAFGSTSAPTSAFGATAPS
AFGSTPVAAGSSAFGGRAAGPSASAQGKMADPNDPQVTLMPQGIAEDLGPHGRPLWKLTV
YGPARGEPNLVGGQDLSQEELRLMAYTARAQGQEAAYSQHEQTLVQQAEAAFRPLFANTN
QACQQAQRNRTEYNRTRAANQGSAFGGASAAATPSAFGSTSTPSAFGAPSAFGAKPATTA
TSTTSAFGSTAAPSAFGTPSAFGASTTAPTASAFGAPSAFGSSKPPSAFGALAPSSTAAT
PSAFGSTATPSAFGQASAFGAPSQASAFGGGTSAFGQASAFGSSTTAGAATTTPAATTGG
SAFGSTAAPSAFGAPSAFGATGQGQTSAFGAPSAFGSAPAAPATTSAFGSTSVFGTGTTS
AFGGSAGGFGGGGAAATTAPTSAFGAAGAASTAKVEQDPYAVFAPKIEDLTDAVLESFKS
ERFAWGMVPLIEPPVDVR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtctgcaagttcttccagcagggccggtgcgcctacggcaacaactgcaagttt
gagcatcctcagggcaatcgatccgcgacatttggccaatcctcgttcgctgcctcaccc
tccgcgttcgggagcacatcgggcccgtctgcctttggcggcggcggcggcgcaaaccgc
ccctcggcattcggcgctccctccgcctttggagcgtccgccgcgccgtccgccttcgga
agcacctctgcgtttggctcggccccgcggcccggaggatccgcctttggcagcgtagca
ggcggtgcgggggcgccttcagcctttggcagcagcaccggtgccccttcggcctttggc
ggcagcaccgcagccccctcttcctttggaggaggcgggacagcgacgaccggatcggcc
tttggagcaccaagcgcctttggagcaaagccaggcggcggcgcatcggcgttcggagcg
ccctctgcctttggcagcacctcggcgcccactagcgcctttggagccactgctccttca
gctttcggatccacacccgtcgccgcggggagcagcgccttcggtggccgagcagcgggc
ccgagcgcatcagcgcagggcaagatggccgaccccaacgatcctcaggtcacgctcatg
ccgcaggggattgcagaggaccttgggccgcatggcagaccgctttggaagctcaccgtc
tacgggccggccagaggcgaaccgaacctcgtcggcggccaggacctcagtcaggaggag
ctgaggctcatggcctacacggctagagctcagggacaggaggctgcctattcgcagcac
gagcagacattggtacagcaggccgaagccgcctttcgccctctcttcgcaaacaccaac
caggcctgccagcaggcccagcgaaaccgcacagagtacaatcggacccgggcagccaac
cagggaagcgcattcgggggtgcctccgccgcagcgacacccagcgcgttcgggtcgacg
tcgacaccgagtgcctttggcgcaccctcggcattcggcgccaaaccggcgacgacggcc
acaagcacaacgagcgcttttggctctacggcggcgcccagcgccttcggtacgccgtcg
gcctttggcgcgtcgacgacggctccgaccgcttcggcatttggcgccccgtccgcgttt
ggatcgtcgaagccgccatcggcgtttggagcccttgccccgtcgagcacggcagcgacg
ccatcggcgttcggctcgacggcgacgccgagtgcgttcggacaggcgtctgcctttggc
gcaccttcgcaggcctctgcattcggcggggggacgagtgcgttcggccaggcttcggcc
tttggctcctccaccaccgccggcgccgccacgaccacgccagcagcaacgacgggcggc
tcagcgtttgggtctaccgcggcgccgagcgcatttggtgccccctcggccttcggtgct
accgggcaggggcagacgagtgcattcggcgcgccctccgccttcggatccgcaccagcc
gcgccagcgacgacgtccgcgttcgggagtacgagcgtattcgggacggggacgacgagc
gcgtttggcggcagcgccggcggtttcggcggcggcggcgcagcggcaactacggcacct
acctctgcattcggcgcagcgggggcggcgtcgacggccaaggtggaacaggatccgtac
gctgtgttcgcacccaagatcgaggacctgacggatgcggtgctcgagagcttcaagagc
gagcggttcgcgtggggcatggtcccgctcatcgagccgcccgtcgatgtacgatga
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