Pseudozyma flocculosa: PFL1_04273
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Entry
PFL1_04273 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp04138
Autophagy - yeast
pfp04142
Lysosome biogenesis
pfp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
PFL1_04273
04138 Autophagy - yeast
PFL1_04273
04148 Efferocytosis
PFL1_04273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfp04131
]
PFL1_04273
Membrane trafficking [BR:
pfp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PFL1_04273
Hops complex
PFL1_04273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_5
Clathrin
RHS_repeat
GLGE_C
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
19318379
NCBI-ProteinID:
XP_007879987
UniProt:
A0A061H6A1
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MSKQRSTYADHLEIGAAAAAPAWRSFSFFDPSQVRDQDDFARSPQALRSPHQVADTALCP
VRPPPLADVLPEGLADGNLPGPSSQSASPAHLRQPSLLVGTIEGQVQVLDPDTFVQLASW
QAFSSQGVNGRVTHLSCDSRGRLVSLGEEDGSRFPILRIWDMRVGRTLDDGRQWIPKLLS
EGKVQHGSRPHPVATVAHTASLSFLSVALGDGTVLLIRGLDSTLMSAAASTAGLASNATV
RPAAAVALPKFKVVYQPGANESLAHEPVTALGFSETPSTVQQSATAQPAAQAEAQPSQGS
RGRKGVGPLPRQRPRKTTTAAANEAGGAGQEGSPAAVHLFIVTLSRILRYIVVGKGAGSS
PAILDDVGCALGCAAVIPSGASRRAVVQPGSLAGKMVVAREEAIYVIGPEGREACFAYEG
PKSSIHLSASQVIIVTPPFAPSSSSASATVRNFVAGRDHGTPSFTPSSSAGRGSPMSNGA
GPLQRRGMAEIAKVTIFDLDNKFVAYSGTFEGGVRETWVGPSGEVAVLGDNGSLTRLDEK
PLRAKLEILYRKSLFLLAVNLARSHAERAGTPDARARVEALMADIFQRYGDHLYNKGDFE
GAMAQYVKTIGHTQPSFVIRKFLDAQRITNLTTYLQELHARGMASSDHTTLLLNCYTKLK
DVASLDRFIKRPPTNQQRDRPGSPTVDAEGGAAGDGPTGDNERDELPFDLETAMRVCRQA
GYFGHAAYLAKRYGEHDEYLRIQIEDANDHEDALAYIRGLTPAEAIRNMTQYGKLLLDQL
PEKTTDLLIELCAGAFRPSSAFGAEQATPAKDSTGRSAAAAYLSYLHVGAFTKGIAAGGD
GGAGAAGGGTGSSTPNLQASSNRNSTAAVEPYHIDGPRSRRQSVLPGIEEGTLAAVEDGA
YPVPSPRVFFAHFIQHPAHFIRFLETVALARWGQSVNMDVHAASHDPLAVVADLSFQGED
EDEVTLALRELGMSANDDYEDQDELDQKAIWNTLLELYLSSSKPSKAGEGNAFGLDGAQR
HQRRERALHLLEQHATLPYDVSHALMLCSVENFTEGLVLLYERMGMYEDVLRFWMDAGED
DERAGGAGSEDASCKVMAALSRYGSAKPHLYPIVLRYLVSSPQILARHGDDLRTVLQHIE
YHSLMSPLEVVQSLSRTGVASVGLVRSYLSRTILAERADIEANETTTASLQASTAEKLAE
VHALTTAERPQVFQMTRCSACGGPLDLPTVHFMCKHSFHQRCLGENETECLVCAQRLGAM
RDWRRDVEALKGREDLFEAELEASKDGFETISTFFSKGLMGLAASAQLS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagcgcagcacctacgccgaccacctcgagattggcgccgcggcggccgct
ccagcctggcgctccttctcgttcttcgaccctagccaggtccgcgaccaggacgacttt
gcccggtcaccacaggcgcttcgcagcccccatcaagtcgcagacacggccctttgcccc
gtacgcccgccaccactcgcagacgtgcttcccgaaggcctcgcagatggcaacctacca
ggaccctcgagccagtcggcctcgccggcgcatctccgccaaccttcgctcctcgtcggc
accatcgaaggtcaggtccaggtcctcgatcccgacacattcgtgcagctggcatcctgg
caggccttttcgtcgcaaggcgtcaacggtcgcgtcacccacctctcttgcgactcgcgc
ggcaggttggtcagcttgggcgaagaggatggatcccgcttccccatcctccggatatgg
gacatgcgagtcggccgcaccctcgacgacggcaggcagtggatccccaagctgctgtcc
gagggcaaggtccagcacggtagccgccctcacccggtcgccacggtggcgcacaccgcc
tcgctctcgttcctctcggtggctcttggcgatgggactgtgcttctcatccgcggcctc
gactcgacgctgatgtcggctgccgcatccacagcgggcctcgcctcgaacgcgactgtc
cggcccgcggcggcagtggcgcttcccaagttcaaggtcgtctaccagcccggagccaac
gagtccttggcacacgagcccgtcactgcgctcggcttttccgaaacaccatcgacggtg
cagcagtccgccaccgcacagcccgcagcacaagccgaagcgcagcccagccagggttct
cggggtcgcaaaggggtcggcccgctgccgcgccagcggcccaggaagacgaccaccgcc
gcggccaacgaggcgggcggtgccggtcaggaaggctcgccagccgcggtccacctcttt
atcgtcacattatcgcgcattctgcgctacatcgtggtcggaaagggtgccggcagcagc
ccagccatcctcgacgatgtcggctgcgccctcggctgtgccgccgtgataccgagcggc
gcgagccgcagggccgtcgttcagccgggcagcctggccggcaagatggtcgtggcgcgc
gaggaggccatctacgtaatcgggcccgagggaagagaggcgtgcttcgcctacgaaggg
cccaagtctagcatccacctgtcggcgtcgcaggtcatcatcgtcacaccgccctttgcc
ccgtcgtcttcatccgcctcggcgacagtccgcaactttgtggccggcagggatcacggc
actccctcgtttacaccctcctcgtccgccggtcgcggctcgcccatgtccaacggcgcg
ggcccgctgcagaggcgcggcatggccgagatcgccaaggtgaccatcttcgacctcgac
aacaagtttgtcgcgtacagcggcacgtttgagggcggcgtgcgcgagacatgggtgggg
ccatccggcgaggtggccgtgctgggcgacaacggcagcctgacgaggctcgacgagaag
ccgctccgcgccaagctcgagatcctctaccgcaagtcgctctttctgctcgccgtcaac
ctagcgcgctcgcatgccgagcgggcgggcacaccggacgcaagggcccgcgtcgaagcg
ctcatggccgacatcttccagcggtacggcgatcacctctacaacaagggcgactttgag
ggcgccatggcccagtacgtcaagacaatcgggcacacccagcccagctttgtgatccgc
aagttcctcgacgcgcagcgcatcaccaacctcaccacctacctgcaggagctccacgca
cgcggcatggccagctccgatcacaccacgctgctgctcaactgctacaccaagctcaag
gacgtcgcctcattggatcgcttcatcaaacggccgcccaccaaccagcagcgcgacagg
cccggctcgccgaccgtggatgccgaaggaggagcagccggcgacgggccgacgggtgac
aatgagcgcgacgagctgccctttgatctcgagacggcgatgcgcgtctgcaggcaggcc
ggatactttggccatgccgcctacctggcgaagcgatatggcgagcacgacgagtacctc
cgcatccagatcgaggacgccaacgatcacgaggacgccctcgcctacatccgcggcctc
acccccgcagaggccatccgcaacatgacccagtacggcaagctgctgctcgaccagctg
ccggagaagacgaccgacctgctcatcgagctctgtgccggggccttccggccctcgagc
gcctttggcgccgagcaggcgacgcctgcaaaggactcgaccggcaggagcgcggcggcc
gcctacctgagctacctccacgttggcgcctttaccaagggcatcgcggcgggcggcgac
ggtggcgctggcgcagctggcggcggcacgggcagctcgacgccgaacctgcaggccagc
tccaaccgcaactcgaccgctgctgtcgagccctatcacatcgacggcccgcgctcgcgt
cgccagtcggtcctgccgggcatcgaggaagggacgctcgccgccgtcgaggacggtgcc
taccccgtgccgtcgcccagggtcttttttgcccactttatccagcatccggcccacttt
atccgcttcctcgagacggtggcgctggcgcgctgggggcagagcgtgaacatggacgtc
cacgccgcctcgcacgacccgctcgccgtcgtcgccgacctgtcattccaaggcgaggac
gaggacgaggtcaccctcgcgctgcgcgagctgggcatgtcggccaacgacgactacgag
gaccaggacgagctggaccagaaggccatctggaatacgctgctcgagctctacctctcg
tcgtccaagccgtccaaggcgggcgagggcaatgcgtttggcctcgacggagcccagcgc
caccagcggcgcgaacgggcgctgcacctgctcgagcagcacgccacgctgccgtacgat
gtcagccacgcgctcatgctctgctcggtcgagaactttaccgagggcctcgtgctgctc
tacgagcgcatgggcatgtacgaggacgtcctgcgcttctggatggacgccggagaggac
gacgagcgggccggcggtgcgggctctgaggacgccagctgcaaggtcatggccgccctc
agccggtacggcagcgccaagccccacctctacccgatcgtgctgcgctacctcgtctcc
tctccccagatcctcgccagacacggcgacgacctgcgcaccgtcctgcagcacatcgag
taccacagcctcatgtcgccgctcgaggttgtccagtccctctcgcgcaccggcgtcgcc
agcgtcggcctggtgcgatcctacctctcccgcaccatcctcgccgagcgcgccgacatc
gaggcaaacgagacgacgacggcgtcgctccaggcctcgaccgccgagaagctggcagaa
gtccatgccctcaccaccgctgagcggccacaggtcttccagatgacccgctgctcggcc
tgcggcgggcccctcgacctgcccacggtccactttatgtgcaaacactcgttccaccag
cggtgtcttggcgagaacgagaccgagtgcctcgtctgcgcccagaggctcggcgccatg
cgcgactggagaagggacgtcgaggccctcaagggcagggaggacctcttcgaagccgaa
ctcgaggcttccaaggacggcttcgagacgatctcgaccttcttttcgaagggtctcatg
ggcctcgccgcgtccgcacagctgtcgtag
DBGET
integrated database retrieval system