KEGG   Pseudozyma flocculosa: PFL1_04273
Entry
PFL1_04273        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp04138  Autophagy - yeast
pfp04142  Lysosome biogenesis
pfp04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    PFL1_04273
   04138 Autophagy - yeast
    PFL1_04273
   04148 Efferocytosis
    PFL1_04273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pfp04131]
    PFL1_04273
Membrane trafficking [BR:pfp04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    PFL1_04273
   Hops complex
    PFL1_04273
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd zf-C3H2C3 TPR_Vps41 zf_RING_Vps8_fungal zf-RING_5 Clathrin RHS_repeat GLGE_C VPS18_RING_C
Other DBs
NCBI-GeneID: 19318379
NCBI-ProteinID: XP_007879987
UniProt: A0A061H6A1
LinkDB
Position
Unknown
AA seq 1309 aa
MSKQRSTYADHLEIGAAAAAPAWRSFSFFDPSQVRDQDDFARSPQALRSPHQVADTALCP
VRPPPLADVLPEGLADGNLPGPSSQSASPAHLRQPSLLVGTIEGQVQVLDPDTFVQLASW
QAFSSQGVNGRVTHLSCDSRGRLVSLGEEDGSRFPILRIWDMRVGRTLDDGRQWIPKLLS
EGKVQHGSRPHPVATVAHTASLSFLSVALGDGTVLLIRGLDSTLMSAAASTAGLASNATV
RPAAAVALPKFKVVYQPGANESLAHEPVTALGFSETPSTVQQSATAQPAAQAEAQPSQGS
RGRKGVGPLPRQRPRKTTTAAANEAGGAGQEGSPAAVHLFIVTLSRILRYIVVGKGAGSS
PAILDDVGCALGCAAVIPSGASRRAVVQPGSLAGKMVVAREEAIYVIGPEGREACFAYEG
PKSSIHLSASQVIIVTPPFAPSSSSASATVRNFVAGRDHGTPSFTPSSSAGRGSPMSNGA
GPLQRRGMAEIAKVTIFDLDNKFVAYSGTFEGGVRETWVGPSGEVAVLGDNGSLTRLDEK
PLRAKLEILYRKSLFLLAVNLARSHAERAGTPDARARVEALMADIFQRYGDHLYNKGDFE
GAMAQYVKTIGHTQPSFVIRKFLDAQRITNLTTYLQELHARGMASSDHTTLLLNCYTKLK
DVASLDRFIKRPPTNQQRDRPGSPTVDAEGGAAGDGPTGDNERDELPFDLETAMRVCRQA
GYFGHAAYLAKRYGEHDEYLRIQIEDANDHEDALAYIRGLTPAEAIRNMTQYGKLLLDQL
PEKTTDLLIELCAGAFRPSSAFGAEQATPAKDSTGRSAAAAYLSYLHVGAFTKGIAAGGD
GGAGAAGGGTGSSTPNLQASSNRNSTAAVEPYHIDGPRSRRQSVLPGIEEGTLAAVEDGA
YPVPSPRVFFAHFIQHPAHFIRFLETVALARWGQSVNMDVHAASHDPLAVVADLSFQGED
EDEVTLALRELGMSANDDYEDQDELDQKAIWNTLLELYLSSSKPSKAGEGNAFGLDGAQR
HQRRERALHLLEQHATLPYDVSHALMLCSVENFTEGLVLLYERMGMYEDVLRFWMDAGED
DERAGGAGSEDASCKVMAALSRYGSAKPHLYPIVLRYLVSSPQILARHGDDLRTVLQHIE
YHSLMSPLEVVQSLSRTGVASVGLVRSYLSRTILAERADIEANETTTASLQASTAEKLAE
VHALTTAERPQVFQMTRCSACGGPLDLPTVHFMCKHSFHQRCLGENETECLVCAQRLGAM
RDWRRDVEALKGREDLFEAELEASKDGFETISTFFSKGLMGLAASAQLS
NT seq 3930 nt   +upstreamnt  +downstreamnt
atgagcaagcagcgcagcacctacgccgaccacctcgagattggcgccgcggcggccgct
ccagcctggcgctccttctcgttcttcgaccctagccaggtccgcgaccaggacgacttt
gcccggtcaccacaggcgcttcgcagcccccatcaagtcgcagacacggccctttgcccc
gtacgcccgccaccactcgcagacgtgcttcccgaaggcctcgcagatggcaacctacca
ggaccctcgagccagtcggcctcgccggcgcatctccgccaaccttcgctcctcgtcggc
accatcgaaggtcaggtccaggtcctcgatcccgacacattcgtgcagctggcatcctgg
caggccttttcgtcgcaaggcgtcaacggtcgcgtcacccacctctcttgcgactcgcgc
ggcaggttggtcagcttgggcgaagaggatggatcccgcttccccatcctccggatatgg
gacatgcgagtcggccgcaccctcgacgacggcaggcagtggatccccaagctgctgtcc
gagggcaaggtccagcacggtagccgccctcacccggtcgccacggtggcgcacaccgcc
tcgctctcgttcctctcggtggctcttggcgatgggactgtgcttctcatccgcggcctc
gactcgacgctgatgtcggctgccgcatccacagcgggcctcgcctcgaacgcgactgtc
cggcccgcggcggcagtggcgcttcccaagttcaaggtcgtctaccagcccggagccaac
gagtccttggcacacgagcccgtcactgcgctcggcttttccgaaacaccatcgacggtg
cagcagtccgccaccgcacagcccgcagcacaagccgaagcgcagcccagccagggttct
cggggtcgcaaaggggtcggcccgctgccgcgccagcggcccaggaagacgaccaccgcc
gcggccaacgaggcgggcggtgccggtcaggaaggctcgccagccgcggtccacctcttt
atcgtcacattatcgcgcattctgcgctacatcgtggtcggaaagggtgccggcagcagc
ccagccatcctcgacgatgtcggctgcgccctcggctgtgccgccgtgataccgagcggc
gcgagccgcagggccgtcgttcagccgggcagcctggccggcaagatggtcgtggcgcgc
gaggaggccatctacgtaatcgggcccgagggaagagaggcgtgcttcgcctacgaaggg
cccaagtctagcatccacctgtcggcgtcgcaggtcatcatcgtcacaccgccctttgcc
ccgtcgtcttcatccgcctcggcgacagtccgcaactttgtggccggcagggatcacggc
actccctcgtttacaccctcctcgtccgccggtcgcggctcgcccatgtccaacggcgcg
ggcccgctgcagaggcgcggcatggccgagatcgccaaggtgaccatcttcgacctcgac
aacaagtttgtcgcgtacagcggcacgtttgagggcggcgtgcgcgagacatgggtgggg
ccatccggcgaggtggccgtgctgggcgacaacggcagcctgacgaggctcgacgagaag
ccgctccgcgccaagctcgagatcctctaccgcaagtcgctctttctgctcgccgtcaac
ctagcgcgctcgcatgccgagcgggcgggcacaccggacgcaagggcccgcgtcgaagcg
ctcatggccgacatcttccagcggtacggcgatcacctctacaacaagggcgactttgag
ggcgccatggcccagtacgtcaagacaatcgggcacacccagcccagctttgtgatccgc
aagttcctcgacgcgcagcgcatcaccaacctcaccacctacctgcaggagctccacgca
cgcggcatggccagctccgatcacaccacgctgctgctcaactgctacaccaagctcaag
gacgtcgcctcattggatcgcttcatcaaacggccgcccaccaaccagcagcgcgacagg
cccggctcgccgaccgtggatgccgaaggaggagcagccggcgacgggccgacgggtgac
aatgagcgcgacgagctgccctttgatctcgagacggcgatgcgcgtctgcaggcaggcc
ggatactttggccatgccgcctacctggcgaagcgatatggcgagcacgacgagtacctc
cgcatccagatcgaggacgccaacgatcacgaggacgccctcgcctacatccgcggcctc
acccccgcagaggccatccgcaacatgacccagtacggcaagctgctgctcgaccagctg
ccggagaagacgaccgacctgctcatcgagctctgtgccggggccttccggccctcgagc
gcctttggcgccgagcaggcgacgcctgcaaaggactcgaccggcaggagcgcggcggcc
gcctacctgagctacctccacgttggcgcctttaccaagggcatcgcggcgggcggcgac
ggtggcgctggcgcagctggcggcggcacgggcagctcgacgccgaacctgcaggccagc
tccaaccgcaactcgaccgctgctgtcgagccctatcacatcgacggcccgcgctcgcgt
cgccagtcggtcctgccgggcatcgaggaagggacgctcgccgccgtcgaggacggtgcc
taccccgtgccgtcgcccagggtcttttttgcccactttatccagcatccggcccacttt
atccgcttcctcgagacggtggcgctggcgcgctgggggcagagcgtgaacatggacgtc
cacgccgcctcgcacgacccgctcgccgtcgtcgccgacctgtcattccaaggcgaggac
gaggacgaggtcaccctcgcgctgcgcgagctgggcatgtcggccaacgacgactacgag
gaccaggacgagctggaccagaaggccatctggaatacgctgctcgagctctacctctcg
tcgtccaagccgtccaaggcgggcgagggcaatgcgtttggcctcgacggagcccagcgc
caccagcggcgcgaacgggcgctgcacctgctcgagcagcacgccacgctgccgtacgat
gtcagccacgcgctcatgctctgctcggtcgagaactttaccgagggcctcgtgctgctc
tacgagcgcatgggcatgtacgaggacgtcctgcgcttctggatggacgccggagaggac
gacgagcgggccggcggtgcgggctctgaggacgccagctgcaaggtcatggccgccctc
agccggtacggcagcgccaagccccacctctacccgatcgtgctgcgctacctcgtctcc
tctccccagatcctcgccagacacggcgacgacctgcgcaccgtcctgcagcacatcgag
taccacagcctcatgtcgccgctcgaggttgtccagtccctctcgcgcaccggcgtcgcc
agcgtcggcctggtgcgatcctacctctcccgcaccatcctcgccgagcgcgccgacatc
gaggcaaacgagacgacgacggcgtcgctccaggcctcgaccgccgagaagctggcagaa
gtccatgccctcaccaccgctgagcggccacaggtcttccagatgacccgctgctcggcc
tgcggcgggcccctcgacctgcccacggtccactttatgtgcaaacactcgttccaccag
cggtgtcttggcgagaacgagaccgagtgcctcgtctgcgcccagaggctcggcgccatg
cgcgactggagaagggacgtcgaggccctcaagggcagggaggacctcttcgaagccgaa
ctcgaggcttccaaggacggcttcgagacgatctcgaccttcttttcgaagggtctcatg
ggcctcgccgcgtccgcacagctgtcgtag

DBGET integrated database retrieval system