KEGG   Pseudozyma flocculosa: PFL1_04407
Entry
PFL1_04407        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03082  ATP-dependent chromatin remodeling
pfp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PFL1_04407
   03083 Polycomb repressive complex
    PFL1_04407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_04407
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     PFL1_04407
  Histone modification proteins
   HAT complexes
    HATB complex
     PFL1_04407
   HDAC complexes
    Sin3A-HDAC complex
     PFL1_04407
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     PFL1_04407
    PRC2.2
     PFL1_04407
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     PFL1_04407
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PFL1_04407
  Chromatin remodeling factors
   NuRD complex
    PFL1_04407
   NuRF complex
    PFL1_04407
   NuRF complex (fruit fly)
    PFL1_04407
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_TEP1_C WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 19318511
NCBI-ProteinID: XP_007880123
UniProt: A0A061H7U7
LinkDB
Position
Unknown
AA seq 431 aa
METIEIDQDDAANAQAMLSNEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWFPDRDTPAD
KSYTQHRLLLGTHTSGQDQNYLQIAQVQLPHTGADGPSSDPSLDLREYDEDKGEIGSYSA
TTARLSIVQKINHDGEVNRARYCPQNCDLIATRTVMGETYVFDRTKHSNTPDADGKCRPD
IILKGQKKEGYGLAWSPLKQGHILAASEDTTVCHWDINAYKKGNNTLAPLQTYRGHTSVV
EDVAWHSHHESLFGSVGDDRQLLIWDVRDEASTPKYRVEAHAGEVNALAFNQENEYILVT
GSADKTVGVWDLRNLKVKLHSLEGHTDEIQGLCFSPHNSTVLASASADRRINIWDLSRIG
MEQTPEDAEDGPPELVFVHGGHTSRPTDLAWSPHLEWALTSAAEDNIVMVWRPSKSVVDV
GDEDVGDEELE
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggagaccatcgagatcgaccaggacgacgcggccaacgcccaggccatgctctccaac
gaggaatacaagatctggaagaagaactcgcccttcctctacgaccttgtggtgacgcac
gcgctggaatggccctcgctcacctgccagtggttcccagacagggacacaccggcggac
aagtcgtacacgcagcaccgcctcctgctcggcacccacacgtccgggcaggaccaaaac
tacctccagattgcacaggtgcagctgccgcacacgggcgccgacgggccgtcgtctgac
ccgtcgctcgatttgcgcgagtacgacgaggacaagggcgagatcgggagctactcggcc
accacggcccgcctctcgatcgtccagaagatcaaccacgacggcgaggtcaaccgcgcc
cgctactgcccgcaaaactgcgacctgatcgccacccgcaccgtcatgggcgagacgtac
gtctttgaccggacaaagcacagcaacacgcccgacgccgacggcaagtgccggccggac
attatcctcaaggggcagaagaaggaagggtacggcctggcgtggtcgccgctcaagcag
ggccacatcctcgcggcgtccgaggacacgacagtctgccactgggacatcaacgcgtac
aagaagggcaacaacacgctcgcgccgctgcagacctaccgcggccacacgtcggtggtt
gaggacgtggcgtggcactcgcaccacgagtcgctgtttggctcggtgggcgacgaccgc
cagctgctcatctgggacgtgcgcgatgaggcgagcacgcccaagtaccgcgtcgaggcg
cacgccggcgaggtcaacgcgctggcctttaaccaggagaacgagtacatcctcgtcacg
gggtcggccgacaagacggtgggcgtgtgggacctgcgcaacctcaaggtcaagctgcac
tcgctcgagggccacaccgacgagatccagggcctctgcttttcgccgcacaactcgacg
gtgctcgcctcggcgagcgccgaccgccggatcaacatctgggacctcagccggatcggc
atggagcagacgcccgaggacgccgaggacggcccgccggagctcgtctttgtccacggc
ggccacacgagccggcccacggacctggcgtggagcccgcacctcgagtgggccctgacc
agcgcggccgaggacaacattgtcatggtctggcggcccagcaagagcgtcgtcgacgtg
ggcgacgaggacgtgggcgacgaggagctcgagtag

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