Pseudozyma flocculosa: PFL1_04407
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Entry
PFL1_04407 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03082
ATP-dependent chromatin remodeling
pfp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PFL1_04407
03083 Polycomb repressive complex
PFL1_04407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfp03036
]
PFL1_04407
Chromosome and associated proteins [BR:
pfp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PFL1_04407
Histone modification proteins
HAT complexes
HATB complex
PFL1_04407
HDAC complexes
Sin3A-HDAC complex
PFL1_04407
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PFL1_04407
PRC2.2
PFL1_04407
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PFL1_04407
Heterochromatin formation proteins
Other heterochromatin formation proteins
PFL1_04407
Chromatin remodeling factors
NuRD complex
PFL1_04407
NuRF complex
PFL1_04407
NuRF complex (fruit fly)
PFL1_04407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_TEP1_C
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
19318511
NCBI-ProteinID:
XP_007880123
UniProt:
A0A061H7U7
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
METIEIDQDDAANAQAMLSNEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWFPDRDTPAD
KSYTQHRLLLGTHTSGQDQNYLQIAQVQLPHTGADGPSSDPSLDLREYDEDKGEIGSYSA
TTARLSIVQKINHDGEVNRARYCPQNCDLIATRTVMGETYVFDRTKHSNTPDADGKCRPD
IILKGQKKEGYGLAWSPLKQGHILAASEDTTVCHWDINAYKKGNNTLAPLQTYRGHTSVV
EDVAWHSHHESLFGSVGDDRQLLIWDVRDEASTPKYRVEAHAGEVNALAFNQENEYILVT
GSADKTVGVWDLRNLKVKLHSLEGHTDEIQGLCFSPHNSTVLASASADRRINIWDLSRIG
MEQTPEDAEDGPPELVFVHGGHTSRPTDLAWSPHLEWALTSAAEDNIVMVWRPSKSVVDV
GDEDVGDEELE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagaccatcgagatcgaccaggacgacgcggccaacgcccaggccatgctctccaac
gaggaatacaagatctggaagaagaactcgcccttcctctacgaccttgtggtgacgcac
gcgctggaatggccctcgctcacctgccagtggttcccagacagggacacaccggcggac
aagtcgtacacgcagcaccgcctcctgctcggcacccacacgtccgggcaggaccaaaac
tacctccagattgcacaggtgcagctgccgcacacgggcgccgacgggccgtcgtctgac
ccgtcgctcgatttgcgcgagtacgacgaggacaagggcgagatcgggagctactcggcc
accacggcccgcctctcgatcgtccagaagatcaaccacgacggcgaggtcaaccgcgcc
cgctactgcccgcaaaactgcgacctgatcgccacccgcaccgtcatgggcgagacgtac
gtctttgaccggacaaagcacagcaacacgcccgacgccgacggcaagtgccggccggac
attatcctcaaggggcagaagaaggaagggtacggcctggcgtggtcgccgctcaagcag
ggccacatcctcgcggcgtccgaggacacgacagtctgccactgggacatcaacgcgtac
aagaagggcaacaacacgctcgcgccgctgcagacctaccgcggccacacgtcggtggtt
gaggacgtggcgtggcactcgcaccacgagtcgctgtttggctcggtgggcgacgaccgc
cagctgctcatctgggacgtgcgcgatgaggcgagcacgcccaagtaccgcgtcgaggcg
cacgccggcgaggtcaacgcgctggcctttaaccaggagaacgagtacatcctcgtcacg
gggtcggccgacaagacggtgggcgtgtgggacctgcgcaacctcaaggtcaagctgcac
tcgctcgagggccacaccgacgagatccagggcctctgcttttcgccgcacaactcgacg
gtgctcgcctcggcgagcgccgaccgccggatcaacatctgggacctcagccggatcggc
atggagcagacgcccgaggacgccgaggacggcccgccggagctcgtctttgtccacggc
ggccacacgagccggcccacggacctggcgtggagcccgcacctcgagtgggccctgacc
agcgcggccgaggacaacattgtcatggtctggcggcccagcaagagcgtcgtcgacgtg
ggcgacgaggacgtgggcgacgaggagctcgagtag
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integrated database retrieval system