KEGG   Pseudozyma flocculosa: PFL1_04476
Entry
PFL1_04476        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10259  F-box and WD-40 domain protein MET30
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp04111  Cell cycle - yeast
pfp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PFL1_04476
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PFL1_04476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pfp04121]
    PFL1_04476
Ubiquitin system [BR:pfp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     PFL1_04476
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 F-box-like Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 F-box Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR19_1st F-box_4
Other DBs
NCBI-GeneID: 19318579
NCBI-ProteinID: XP_007880191
UniProt: A0A061H6Q9
LinkDB
Position
Unknown
AA seq 1034 aa
MVDPPVLDSEMARPAATAGPAASTRSTGAEASAAQVPLHPSSPPSPATTFPTTTIDDDDD
DATATASTSRTPPSTIAGGEAAASSSSSLHPTDHRHRHRHTGSGNNDQGIVSVTAPSNDD
AAIASAYYPSTAMASLSVATPPATWTPDPMLAHTSQRAHADVDLAPPAAADGTSSPPPPP
PLSSAYVQPPASNVTATETSGDGWSMVPRTDASYQGRDPAEPTNRRCVPTGSGADPAFPD
VAFGERASPAVISFQRATGARGHGRGRGGSRALTPAGLSPARVDGSPNPSGLHRGGLRGL
DESLDLAMSKVDAASSSPASPADAKPGAAIPAAAAHNSSTPLVPPATRKLCVRHQRMADE
GTTARLQKSIESLPLADQTAVNTVWSLFSSSSHSRRALILQGILTMCCFSQLSLLSSELA
LAIRIDPFSLFPREVSLKVLGHLDAISLGRAAQVSRSWKQLADDDLLWRNMCEQHIERKC
EKCGWGLPLLSERRRRVPGPGMQAGTPESRQLTIDPPTASAAASPTSNGSGPGHGLASGA
LKRTITAAANAAALEKQSRSRAGSPSAINRGLVMASGGAGSSSMSGGSDAEMQDAEAASS
DGCDAAERGGPPSKRQRSCTDGTANAANAAATTDVQRASAVGVGAGAVASAQAPPAAAAA
YKTRPWKSVYCERLAIERNWRRGRYVSRTLTGHTDGIMCLQFSEHLAHPAFPVVITGSYD
RTARIWNLETGEQLRKLEGHTRGVRCLQFDEAKLITGSMDRTLKIWNWRTGALMRTLEGH
TEGIVCLNFNEDTLASGSADSNVKIWNFRTGECYTLRGHHDWVNAVTLWTGPAAKRRLER
RREAAGASKPGGRSARAGGGDDDDPEAAGTFLFSASDDGTIRLWDLGLRECLLTFDGHVG
QVQSLKLVMMDESARPVLISGSLDNTLKVWDVRTGRCLRTLFGHVEGVWSLDVDKLRIVS
ASHDRTIKIWDRDSGFCQNTLVGHKGAVTCLSLGDDKIVSGSDDGDIKVWSFAAACQQAQ
SPAQSQQPPPPSTA
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggtagatccccccgtgctcgactcggagatggcccggccggcagcgacagctggcccc
gctgcctcgacgcgctcgaccggcgcagaggcctccgcagcacaggtccccctgcacccc
tcgtctcctccctcgcccgccaccacttttcctaccaccaccatcgacgacgacgacgac
gacgccaccgccacagcatcgacgtctcgcacccctccatccaccatcgccggcggcgaa
gcagccgcctcgtcgtcttcctcgctgcatccgaccgaccaccgtcaccgccaccgtcac
accggcagcggcaacaacgaccaaggcatcgtgagcgtcacggcaccgagcaacgacgac
gccgccatcgcctcagcctactatccgtcgacggccatggcctcgctcagcgtcgccacc
ccgccagccacctggaccccggacccgatgcttgcacacacttctcagcgagcgcacgcg
gacgtcgacctggcccctccggcggccgccgacggtacgtcatcgccgccaccgccgccg
ccgctctcctcggcgtatgtgcagccgcccgcgtccaacgtcaccgccaccgagacctcg
ggcgacggctggtccatggtgcccaggacggatgccagctaccaaggcagggatccggcc
gagccaaccaaccgccgatgcgtccccaccggcagcggcgccgacccggcgttcccggac
gtcgcctttggcgagcgtgcatcgccggccgtcatctcgttccagcgtgccacgggcgct
cgcggccacggtcgcggtcggggcggcagccgtgccctcacgccggccggcctgtcgccc
gctcgcgtcgacggcagcccgaacccgtctggcctgcaccgaggcggcctgcgtggcctc
gacgagagcctggacctcgccatgagcaaggtcgatgccgcctcgtcgtcgccggccagc
cctgccgacgccaaaccgggtgcagctatccccgccgccgccgcccacaactcgagcacg
cccctcgtcccgcccgccacacgcaagctgtgcgtccggcaccagaggatggccgacgag
ggcaccactgcgcggctgcaaaagtcgatcgagagcctgccgctcgccgaccagacggcc
gtcaacacggtgtggtcgctcttttcctcgtcgtcgcactcgaggcgcgcgctgatcctg
cagggcatcctgaccatgtgctgctttagccagctgtcgctgctgtcgtcggagctggcg
ctggcgatccgcatcgacccgttctcgctcttcccgcgcgaggtgtcgctcaaggtgctc
ggccacctcgacgccatcagcctcggacgcgccgcccaggtcagccggtcgtggaagcag
ctggccgacgacgacctgctctggcgcaacatgtgcgagcagcacatcgagcgcaagtgc
gaaaagtgcggctggggcctgccgctgttgagcgagcgcaggcgccgcgtgcccggaccc
ggcatgcaggcgggcacccccgagagccgccagctcaccatcgatccgcccactgcttcc
gcagctgccagcccgactagcaacggcagcggccccggccacggactcgccagcggagcg
ctcaagcggaccattacggcagccgccaacgcggccgcgctcgaaaagcagtcgaggtcg
cgcgccggcagcccgtctgccatcaatcgcgggctcgtcatggccagcggcggagcggga
tcgtcgtcgatgtctggtggctccgatgccgagatgcaggacgccgaagccgccagcagc
gatggatgcgacgcggccgagcgcggcggcccgcccagcaagaggcagcgcagctgcacc
gatgggacggccaacgccgccaacgccgccgccacgacggatgtccagcgagcctcggct
gtcggtgtcggtgctggtgccgtcgccagtgcacaggctccgcccgccgccgccgccgcc
tacaagacgcgaccttggaagtcggtctactgcgaacggctggccatcgagcgcaactgg
cggcgcggacgctacgtgtcgcgcaccctgaccggacacaccgacggcatcatgtgcctg
cagttcagcgagcatctcgcccacccggccttccccgtcgtcatcacgggcagctacgac
cgcaccgcgcgcatctggaacctcgagacgggcgagcagctgcgcaagctcgagggccac
acgcgcggcgtgcgctgcctccagtttgacgaggccaagctcatcaccggctccatggac
cgcacgctcaagatctggaactggcgcacgggcgccctgatgcgcaccctcgagggccac
accgagggcatcgtctgcctcaacttcaacgaggacaccctggccagcggcagcgccgac
agcaacgtcaagatctggaacttccgcacgggcgagtgctacacgcttcgcggccaccac
gactgggtcaacgccgtcacgctgtggaccggacccgcggccaagaggcgcctcgagcgg
cgacgcgaggccgccggcgccagcaagccgggcggccgctcggcccgagccggcggcggc
gacgacgacgaccccgaggcggcgggcacgttcctcttctcggcctccgacgacggcacc
atccggctgtgggatctcggcctgcgcgagtgcctgctgacgtttgacggccacgtcggc
caggtccagagcctcaagctggtgatgatggacgagtcggcgcggcccgtgctgatctcg
ggctcgctcgacaacacgctcaaggtgtgggacgtgcgtacgggacggtgcctgcgcacc
ctctttgggcacgtcgagggcgtgtggtcgctcgacgtcgacaagctgcgcatcgtgtcg
gcgagccacgaccgcaccatcaagatctgggaccgcgacagcggcttctgccagaacacg
ctcgtgggccacaagggcgccgtgacgtgcctcagcctcggcgacgacaagattgtcagc
ggcagcgacgacggcgacatcaaggtgtggagctttgccgccgcctgtcagcaggcgcag
tcgccggcgcagtcgcagcagccaccgccgccctcgacggcctag

DBGET integrated database retrieval system