Pseudozyma flocculosa: PFL1_04476
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Entry
PFL1_04476 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp04111
Cell cycle - yeast
pfp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PFL1_04476
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PFL1_04476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfp04121
]
PFL1_04476
Ubiquitin system [BR:
pfp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PFL1_04476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
F-box-like
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
F-box
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
F-box_4
Motif
Other DBs
NCBI-GeneID:
19318579
NCBI-ProteinID:
XP_007880191
UniProt:
A0A061H6Q9
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MVDPPVLDSEMARPAATAGPAASTRSTGAEASAAQVPLHPSSPPSPATTFPTTTIDDDDD
DATATASTSRTPPSTIAGGEAAASSSSSLHPTDHRHRHRHTGSGNNDQGIVSVTAPSNDD
AAIASAYYPSTAMASLSVATPPATWTPDPMLAHTSQRAHADVDLAPPAAADGTSSPPPPP
PLSSAYVQPPASNVTATETSGDGWSMVPRTDASYQGRDPAEPTNRRCVPTGSGADPAFPD
VAFGERASPAVISFQRATGARGHGRGRGGSRALTPAGLSPARVDGSPNPSGLHRGGLRGL
DESLDLAMSKVDAASSSPASPADAKPGAAIPAAAAHNSSTPLVPPATRKLCVRHQRMADE
GTTARLQKSIESLPLADQTAVNTVWSLFSSSSHSRRALILQGILTMCCFSQLSLLSSELA
LAIRIDPFSLFPREVSLKVLGHLDAISLGRAAQVSRSWKQLADDDLLWRNMCEQHIERKC
EKCGWGLPLLSERRRRVPGPGMQAGTPESRQLTIDPPTASAAASPTSNGSGPGHGLASGA
LKRTITAAANAAALEKQSRSRAGSPSAINRGLVMASGGAGSSSMSGGSDAEMQDAEAASS
DGCDAAERGGPPSKRQRSCTDGTANAANAAATTDVQRASAVGVGAGAVASAQAPPAAAAA
YKTRPWKSVYCERLAIERNWRRGRYVSRTLTGHTDGIMCLQFSEHLAHPAFPVVITGSYD
RTARIWNLETGEQLRKLEGHTRGVRCLQFDEAKLITGSMDRTLKIWNWRTGALMRTLEGH
TEGIVCLNFNEDTLASGSADSNVKIWNFRTGECYTLRGHHDWVNAVTLWTGPAAKRRLER
RREAAGASKPGGRSARAGGGDDDDPEAAGTFLFSASDDGTIRLWDLGLRECLLTFDGHVG
QVQSLKLVMMDESARPVLISGSLDNTLKVWDVRTGRCLRTLFGHVEGVWSLDVDKLRIVS
ASHDRTIKIWDRDSGFCQNTLVGHKGAVTCLSLGDDKIVSGSDDGDIKVWSFAAACQQAQ
SPAQSQQPPPPSTA
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtagatccccccgtgctcgactcggagatggcccggccggcagcgacagctggcccc
gctgcctcgacgcgctcgaccggcgcagaggcctccgcagcacaggtccccctgcacccc
tcgtctcctccctcgcccgccaccacttttcctaccaccaccatcgacgacgacgacgac
gacgccaccgccacagcatcgacgtctcgcacccctccatccaccatcgccggcggcgaa
gcagccgcctcgtcgtcttcctcgctgcatccgaccgaccaccgtcaccgccaccgtcac
accggcagcggcaacaacgaccaaggcatcgtgagcgtcacggcaccgagcaacgacgac
gccgccatcgcctcagcctactatccgtcgacggccatggcctcgctcagcgtcgccacc
ccgccagccacctggaccccggacccgatgcttgcacacacttctcagcgagcgcacgcg
gacgtcgacctggcccctccggcggccgccgacggtacgtcatcgccgccaccgccgccg
ccgctctcctcggcgtatgtgcagccgcccgcgtccaacgtcaccgccaccgagacctcg
ggcgacggctggtccatggtgcccaggacggatgccagctaccaaggcagggatccggcc
gagccaaccaaccgccgatgcgtccccaccggcagcggcgccgacccggcgttcccggac
gtcgcctttggcgagcgtgcatcgccggccgtcatctcgttccagcgtgccacgggcgct
cgcggccacggtcgcggtcggggcggcagccgtgccctcacgccggccggcctgtcgccc
gctcgcgtcgacggcagcccgaacccgtctggcctgcaccgaggcggcctgcgtggcctc
gacgagagcctggacctcgccatgagcaaggtcgatgccgcctcgtcgtcgccggccagc
cctgccgacgccaaaccgggtgcagctatccccgccgccgccgcccacaactcgagcacg
cccctcgtcccgcccgccacacgcaagctgtgcgtccggcaccagaggatggccgacgag
ggcaccactgcgcggctgcaaaagtcgatcgagagcctgccgctcgccgaccagacggcc
gtcaacacggtgtggtcgctcttttcctcgtcgtcgcactcgaggcgcgcgctgatcctg
cagggcatcctgaccatgtgctgctttagccagctgtcgctgctgtcgtcggagctggcg
ctggcgatccgcatcgacccgttctcgctcttcccgcgcgaggtgtcgctcaaggtgctc
ggccacctcgacgccatcagcctcggacgcgccgcccaggtcagccggtcgtggaagcag
ctggccgacgacgacctgctctggcgcaacatgtgcgagcagcacatcgagcgcaagtgc
gaaaagtgcggctggggcctgccgctgttgagcgagcgcaggcgccgcgtgcccggaccc
ggcatgcaggcgggcacccccgagagccgccagctcaccatcgatccgcccactgcttcc
gcagctgccagcccgactagcaacggcagcggccccggccacggactcgccagcggagcg
ctcaagcggaccattacggcagccgccaacgcggccgcgctcgaaaagcagtcgaggtcg
cgcgccggcagcccgtctgccatcaatcgcgggctcgtcatggccagcggcggagcggga
tcgtcgtcgatgtctggtggctccgatgccgagatgcaggacgccgaagccgccagcagc
gatggatgcgacgcggccgagcgcggcggcccgcccagcaagaggcagcgcagctgcacc
gatgggacggccaacgccgccaacgccgccgccacgacggatgtccagcgagcctcggct
gtcggtgtcggtgctggtgccgtcgccagtgcacaggctccgcccgccgccgccgccgcc
tacaagacgcgaccttggaagtcggtctactgcgaacggctggccatcgagcgcaactgg
cggcgcggacgctacgtgtcgcgcaccctgaccggacacaccgacggcatcatgtgcctg
cagttcagcgagcatctcgcccacccggccttccccgtcgtcatcacgggcagctacgac
cgcaccgcgcgcatctggaacctcgagacgggcgagcagctgcgcaagctcgagggccac
acgcgcggcgtgcgctgcctccagtttgacgaggccaagctcatcaccggctccatggac
cgcacgctcaagatctggaactggcgcacgggcgccctgatgcgcaccctcgagggccac
accgagggcatcgtctgcctcaacttcaacgaggacaccctggccagcggcagcgccgac
agcaacgtcaagatctggaacttccgcacgggcgagtgctacacgcttcgcggccaccac
gactgggtcaacgccgtcacgctgtggaccggacccgcggccaagaggcgcctcgagcgg
cgacgcgaggccgccggcgccagcaagccgggcggccgctcggcccgagccggcggcggc
gacgacgacgaccccgaggcggcgggcacgttcctcttctcggcctccgacgacggcacc
atccggctgtgggatctcggcctgcgcgagtgcctgctgacgtttgacggccacgtcggc
caggtccagagcctcaagctggtgatgatggacgagtcggcgcggcccgtgctgatctcg
ggctcgctcgacaacacgctcaaggtgtgggacgtgcgtacgggacggtgcctgcgcacc
ctctttgggcacgtcgagggcgtgtggtcgctcgacgtcgacaagctgcgcatcgtgtcg
gcgagccacgaccgcaccatcaagatctgggaccgcgacagcggcttctgccagaacacg
ctcgtgggccacaagggcgccgtgacgtgcctcagcctcggcgacgacaagattgtcagc
ggcagcgacgacggcgacatcaaggtgtggagctttgccgccgcctgtcagcaggcgcag
tcgccggcgcagtcgcagcagccaccgccgccctcgacggcctag
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