Pseudozyma flocculosa: PFL1_04537
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Entry
PFL1_04537 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PFL1_04537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_04537
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PFL1_04537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
19318638
NCBI-ProteinID:
XP_007880254
UniProt:
A0A061H4G8
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MSVVRNSLTIFVVDISASMGSARTVYEKVFKPYSGVEVKERKTTDLQWVCEFISARIVEI
ILRGLKTTKVALITYGSPRTNNTVVDHGGYSEGYDGIDEIFRLNVPTLDTLDLVQSLRAV
GENDRAPPADPLAALVDAIQLSTCPDRGGIKESQKSTWTRMIYLITDGKSNFSWLGSDDI
KGKIKTEHINVRVLGVDFDDEDVGFVEENKDATKRANEGFWHDFLAGIDTGLIATAQDAI
EQASLPNVQLTSPSPSKSTLSFGDPKDLASKEAIAIPIAMYKMTEPQRPMTQSKISKLAQ
ESAGARIEREMQETRMQELVPSSTPALAKGEADDEPAPVPSYRAETRRDHFLLEDIGRVE
KGKGQTAQPLPEESVAKFTRAWKLGASLIPVPDEAFGQMDTMPGLEILHFVKSEAYRREY
SLDQIWFVFPDLNNTKAQIQLASLVRGMHELELMAVVRLVRRQHAEPELGVLWPYPGKDY
NCFYYSRVPFREDYRRFIFPPLDRIITKEGDELFEGPSIPTAEDQELFDEFVDSLDLMEV
DGGTGENGQWFNILDSFNPAIHLLKDAVKHRFVHPESTELPGPHPELTKYFRRPVEVTQR
SQGILKRCKERFKIGFIPPKNSFEKKKRLAHEAGQRQEAQGWHDAKKTKIDEQQAGQGGA
PKRESGAAVRMDDGDDSETEDEDEGRNRPSGAAAAEGHGDDGDGDGDEEAIKAEEASQGL
PLTQPSSRIGTDDPVEGFKRLVESEDDVTKTFVEMLDTISYLLRSREYAKVVLCCKEAKR
VAQEYEEAIRWNGYIRQLKQEAMNKHTQFWDEHMAGRLEVGLVTEDEDEARQSDVSRETA
DEFVLSSTESRE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtccgcaactcgctcaccatcttcgtcgtggacatatcggcgtccatgggc
tcggcccgcaccgtatacgaaaaggtgttcaagccctactcgggcgtcgaggtcaaagag
aggaagacgaccgacctccagtgggtctgcgagttcatctcggccaggatcgtcgagatc
atcctgagaggcctcaagacgaccaaggtggccctcatcacctatggctcgccgcgcact
aacaacactgtcgtcgaccatggaggctacagcgagggctacgacggcatcgacgagatc
ttccgcctcaacgtgcccacgctcgacaccctcgacctcgtacagagcctgcgggcggtc
ggcgaaaacgacagagcgccaccagcagacccgctggcagctttggtcgacgccatccag
ctctccacctgccccgaccgcggaggcatcaaggagtcgcagaagagcacgtggactagg
atgatctacctcatcaccgacggaaagtccaacttcagctggctcggcagcgacgacatc
aagggcaagatcaagacggagcatatcaacgtccgcgtgctcggcgtcgactttgacgac
gaagacgttggctttgtcgaggagaacaaggacgcgaccaagcgagccaacgagggattc
tggcacgatttcctcgccggcatcgacaccgggctgatcgccacggcgcaggatgccatc
gagcaggccagcctgcccaatgtccagctgacgagcccgtcgccatccaagtctacgctc
tccttcggcgatcccaaggacctcgccagcaaagaggcgattgcgatcccgatcgccatg
tacaagatgaccgagccgcagcggcccatgacgcagtcaaagatcagcaagctggcccag
gaaagcgccggagccaggatcgagagggagatgcaggagaccaggatgcaggagctggtg
ccgagcagcacgccggcgctggccaagggcgaggccgacgacgagcctgcgcccgtgccc
tcgtaccgggccgagacgaggcgcgaccacttcctgctcgaggacattggccgcgtggaa
aagggcaaaggccagaccgcacagccgctgcccgaggagtcggtggccaagttcacgcgt
gcgtggaagctgggcgcatcgttgatccccgtccccgacgaggcctttggtcagatggac
acgatgcctggcctcgagatcctgcactttgtcaagtctgaggcgtaccgccgcgagtac
agcctcgaccagatctggttcgtcttcccggacctcaacaacaccaaggcgcaaatccag
ctcgcgagtctggtccgcggcatgcacgagctcgagctgatggccgtcgtcaggctggtg
cgccgtcagcacgcggagcccgagctgggcgtgctatggccctaccccgggaaagactac
aactgcttctactactcgcgcgtgccgttccgcgaggactaccgccgtttcatcttcccg
ccgctcgaccgcatcatcaccaaggagggcgacgagctgttcgagggcccgtcgatcccg
acggccgaggatcaggagttgtttgacgagtttgtcgactcgctcgacctcatggaggtc
gacggcgggacgggcgaaaacgggcagtggttcaacatcctcgactcgttcaaccccgcc
atccacctgctcaaggacgccgtcaagcaccgcttcgtccacccagagtcgaccgagctg
cctggcccgcacccggagctgaccaagtactttaggcgcccggtcgaggtgacgcagcgc
tcgcagggcatcctcaagcgctgcaaggagaggttcaagatcggcttcatcccgcccaag
aacagctttgagaaaaagaagcggctggcgcacgaggccggccagaggcaggaggcccag
ggctggcacgatgccaagaagaccaagatcgacgagcagcaggcgggtcaaggtggtgcg
ccgaagcgcgagagcggcgctgctgtccgaatggacgacggcgacgacagcgagacggag
gacgaggacgaggggcgcaacagaccgtcgggtgcggcggcggccgagggccatggcgac
gacggcgacggcgacggcgacgaagaggccatcaaggcggaggaggcatcgcagggcctg
ccactgactcagcccagcagccgcatcggcaccgacgacccggtcgagggcttcaagagg
ctcgtcgagtccgaggacgacgtgaccaagacgtttgtcgagatgctcgacacgatctcg
tacctgcttcgctcgcgcgagtacgccaaggtggtcttgtgctgcaaggaggccaagcgg
gtggcacaggagtacgaagaggcgatccgatggaacggctacatccggcagctcaagcaa
gaggcgatgaacaagcacacgcagttctgggacgagcacatggccggtcgactcgaagtg
ggcctggtgaccgaggacgaggacgaggcgcgccagtcggacgtgtcgagggagacggcc
gacgagtttgtcctgtcgtctaccgagtcgcgcgagtag
DBGET
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