KEGG   Pseudozyma flocculosa: PFL1_04537
Entry
PFL1_04537        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PFL1_04537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_04537
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     PFL1_04537
SSDB
Motif
Pfam: Ku Ku_PK_bind VWA VWA_2
Other DBs
NCBI-GeneID: 19318638
NCBI-ProteinID: XP_007880254
UniProt: A0A061H4G8
LinkDB
Position
Unknown
AA seq 852 aa
MSVVRNSLTIFVVDISASMGSARTVYEKVFKPYSGVEVKERKTTDLQWVCEFISARIVEI
ILRGLKTTKVALITYGSPRTNNTVVDHGGYSEGYDGIDEIFRLNVPTLDTLDLVQSLRAV
GENDRAPPADPLAALVDAIQLSTCPDRGGIKESQKSTWTRMIYLITDGKSNFSWLGSDDI
KGKIKTEHINVRVLGVDFDDEDVGFVEENKDATKRANEGFWHDFLAGIDTGLIATAQDAI
EQASLPNVQLTSPSPSKSTLSFGDPKDLASKEAIAIPIAMYKMTEPQRPMTQSKISKLAQ
ESAGARIEREMQETRMQELVPSSTPALAKGEADDEPAPVPSYRAETRRDHFLLEDIGRVE
KGKGQTAQPLPEESVAKFTRAWKLGASLIPVPDEAFGQMDTMPGLEILHFVKSEAYRREY
SLDQIWFVFPDLNNTKAQIQLASLVRGMHELELMAVVRLVRRQHAEPELGVLWPYPGKDY
NCFYYSRVPFREDYRRFIFPPLDRIITKEGDELFEGPSIPTAEDQELFDEFVDSLDLMEV
DGGTGENGQWFNILDSFNPAIHLLKDAVKHRFVHPESTELPGPHPELTKYFRRPVEVTQR
SQGILKRCKERFKIGFIPPKNSFEKKKRLAHEAGQRQEAQGWHDAKKTKIDEQQAGQGGA
PKRESGAAVRMDDGDDSETEDEDEGRNRPSGAAAAEGHGDDGDGDGDEEAIKAEEASQGL
PLTQPSSRIGTDDPVEGFKRLVESEDDVTKTFVEMLDTISYLLRSREYAKVVLCCKEAKR
VAQEYEEAIRWNGYIRQLKQEAMNKHTQFWDEHMAGRLEVGLVTEDEDEARQSDVSRETA
DEFVLSSTESRE
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgagtgtggtccgcaactcgctcaccatcttcgtcgtggacatatcggcgtccatgggc
tcggcccgcaccgtatacgaaaaggtgttcaagccctactcgggcgtcgaggtcaaagag
aggaagacgaccgacctccagtgggtctgcgagttcatctcggccaggatcgtcgagatc
atcctgagaggcctcaagacgaccaaggtggccctcatcacctatggctcgccgcgcact
aacaacactgtcgtcgaccatggaggctacagcgagggctacgacggcatcgacgagatc
ttccgcctcaacgtgcccacgctcgacaccctcgacctcgtacagagcctgcgggcggtc
ggcgaaaacgacagagcgccaccagcagacccgctggcagctttggtcgacgccatccag
ctctccacctgccccgaccgcggaggcatcaaggagtcgcagaagagcacgtggactagg
atgatctacctcatcaccgacggaaagtccaacttcagctggctcggcagcgacgacatc
aagggcaagatcaagacggagcatatcaacgtccgcgtgctcggcgtcgactttgacgac
gaagacgttggctttgtcgaggagaacaaggacgcgaccaagcgagccaacgagggattc
tggcacgatttcctcgccggcatcgacaccgggctgatcgccacggcgcaggatgccatc
gagcaggccagcctgcccaatgtccagctgacgagcccgtcgccatccaagtctacgctc
tccttcggcgatcccaaggacctcgccagcaaagaggcgattgcgatcccgatcgccatg
tacaagatgaccgagccgcagcggcccatgacgcagtcaaagatcagcaagctggcccag
gaaagcgccggagccaggatcgagagggagatgcaggagaccaggatgcaggagctggtg
ccgagcagcacgccggcgctggccaagggcgaggccgacgacgagcctgcgcccgtgccc
tcgtaccgggccgagacgaggcgcgaccacttcctgctcgaggacattggccgcgtggaa
aagggcaaaggccagaccgcacagccgctgcccgaggagtcggtggccaagttcacgcgt
gcgtggaagctgggcgcatcgttgatccccgtccccgacgaggcctttggtcagatggac
acgatgcctggcctcgagatcctgcactttgtcaagtctgaggcgtaccgccgcgagtac
agcctcgaccagatctggttcgtcttcccggacctcaacaacaccaaggcgcaaatccag
ctcgcgagtctggtccgcggcatgcacgagctcgagctgatggccgtcgtcaggctggtg
cgccgtcagcacgcggagcccgagctgggcgtgctatggccctaccccgggaaagactac
aactgcttctactactcgcgcgtgccgttccgcgaggactaccgccgtttcatcttcccg
ccgctcgaccgcatcatcaccaaggagggcgacgagctgttcgagggcccgtcgatcccg
acggccgaggatcaggagttgtttgacgagtttgtcgactcgctcgacctcatggaggtc
gacggcgggacgggcgaaaacgggcagtggttcaacatcctcgactcgttcaaccccgcc
atccacctgctcaaggacgccgtcaagcaccgcttcgtccacccagagtcgaccgagctg
cctggcccgcacccggagctgaccaagtactttaggcgcccggtcgaggtgacgcagcgc
tcgcagggcatcctcaagcgctgcaaggagaggttcaagatcggcttcatcccgcccaag
aacagctttgagaaaaagaagcggctggcgcacgaggccggccagaggcaggaggcccag
ggctggcacgatgccaagaagaccaagatcgacgagcagcaggcgggtcaaggtggtgcg
ccgaagcgcgagagcggcgctgctgtccgaatggacgacggcgacgacagcgagacggag
gacgaggacgaggggcgcaacagaccgtcgggtgcggcggcggccgagggccatggcgac
gacggcgacggcgacggcgacgaagaggccatcaaggcggaggaggcatcgcagggcctg
ccactgactcagcccagcagccgcatcggcaccgacgacccggtcgagggcttcaagagg
ctcgtcgagtccgaggacgacgtgaccaagacgtttgtcgagatgctcgacacgatctcg
tacctgcttcgctcgcgcgagtacgccaaggtggtcttgtgctgcaaggaggccaagcgg
gtggcacaggagtacgaagaggcgatccgatggaacggctacatccggcagctcaagcaa
gaggcgatgaacaagcacacgcagttctgggacgagcacatggccggtcgactcgaagtg
ggcctggtgaccgaggacgaggacgaggcgcgccagtcggacgtgtcgagggagacggcc
gacgagtttgtcctgtcgtctaccgagtcgcgcgagtag

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