Pseudozyma flocculosa: PFL1_04560
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Entry
PFL1_04560 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14569
ribosome biogenesis protein BMS1
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFL1_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_04560
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
GTPase
PFL1_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
AAA_22
AAA_16
PduV-EutP
AAA
ABC_tran
ATPase_2
MMR_HSR1
MobB
RNA_helicase
AAA_14
AAA_28
NB-ARC
nSTAND3
NACHT
DO-GTPase2
cobW
RsgA_GTPase
AAA_33
Motif
Other DBs
NCBI-GeneID:
19318661
NCBI-ProteinID:
XP_007880277
UniProt:
A0A061H724
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MADAQQTNKAHRKAQAGPKSEKAKRASKHQNGFNAKAFISANPRTAEKQIRRNAEKNQKR
YHVPMADRTPEDEPPPIIVAVVGPEGVGKTTLMRSLIRRYTKHTIAEIKGPVTVVAGKKR
RITFVECNNDINSMIDIGKVADLVLLMIDGSFGFEMETMEFLNVLQSHGFPKVIGVLTHL
DLIKKSKTLRATKKRLKQRFWTEIYDGAKLFYLSGIINGRYPDTEIVNLSRFISVMKFRP
LVFRNAHPYLLADRLEDLTSREAIRRDPKMDRTITVYGYLRGTHLRSSQRVHIPGAGDLT
ISSVEKLTDPCPLPTQESEKRRKLSEKHKLIHAPMSDVGGVMFDKDAVYINVPGNFTRNA
DGETDTPAGEGEQMVMDLQDARVTLDDRAARGELRLFESSTSALRADDPASDDAASAKSR
GKRTRRAAFDDVRLDDDELGDDDDGDEEEDDDDGQLDEEEDGEDMDDDEGRERRSVDRRG
RSLARPMPGQDSDGDEADKGKIAYADSDSDMGLGSDQEDAEDEDDEEDEIAPWKRNLAGR
AESVVLANRRRKAADLTRLIYASDKTPEQIASGDIFDDDDDDDADIEKMAQADDGDDFFR
PAQKSSGTVHKGPLNEEVDECPDQTRQPIDAAAVSRWESERVLDSIRHLFITGDEPDNLE
ERKDGKRNVASDDEDDDDDDEEDGDEGDDGNNESARDAALAAKKAALKRRFDEQYDDPDA
EGAGDWYDEQKDLLAKQAELNRAEFADEDEDTRHLVEGFRPGAYVRIELSKVPCELVDYF
DPSFPLLVGGLLASEETFGFVQVRIKRHRWHHKILKTNDPLIFSLGWRRFQSIPIYSLDD
GTRNRMLKYTPEHMHCLATFYGPGSAPNTGFCAFNTLGSDNPGFRVSATGVVLDVDAGTQ
KIVKKLKLTGTPAKIYKKTAFIKDMFTSSLEVAKFEGAHLKTVSGIRGQVKKALAKPEGQ
FRATFEDKILMSDIVFLRAWYSIQPRRFYNPVTSLLLSPASRAWKGMRLTGAVRRDERIK
TPLNVNSTYKPVERPEHRQFNPLRVPKKLQAALPYSSKPKMTKAQGKPTYLQQRAVVLEA
DEKKAVALLQQMRTVQKEKVQKRRDKQTERRAVKAKEAEKQEERRAEKRKAEMKEIYRAA
GLRDAKRQKLAAKRGGRGSAGGGGDD
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcccagcagaccaacaaggcgcaccgcaaggcccaggcggggcccaagtcg
gaaaaggccaagcgggcgagcaagcaccagaacggcttcaatgcaaaggcgttcatctct
gccaacccgcgcacggctgaaaagcagatccggcggaatgcggaaaagaaccagaagcga
taccatgtgccgatggcggaccgcacgcccgaggacgagccgccgccgattattgtggcc
gtcgtgggtcccgagggcgttggcaagacgacgctgatgcgcagcctgatccggcggtac
accaaacacacgattgccgagatcaagggcccggtgacggtggtggcgggcaagaagcgg
cggatcacgtttgtcgagtgcaacaacgacatcaactcgatgatcgacattggcaaggtg
gccgacctggtgctgctcatgatcgacggcagcttcggcttcgagatggagacgatggag
ttcctcaacgtgctgcagtcgcacggcttccccaaggtcattggcgtgctgacccacctc
gacctgatcaaaaagtcaaagacgctgcgggccaccaagaagcggctcaagcagcgcttc
tggaccgagatctacgacggcgccaagctcttctacctctcgggcatcatcaacggccgc
tacccggacaccgagattgtcaacctgagccgcttcatcagcgtcatgaagttccgccct
ctggtcttccgcaacgcccacccgtacctgctggccgaccggctcgaggacctcacctcg
cgcgaggccatccgcagggaccccaagatggaccgcaccatcaccgtctacggctacctc
cgcggcacccacctgcgctccagccagcgcgtccacatccccggcgccggcgacctcacc
atctcctcggtcgagaagctcaccgacccgtgcccgctgccgacgcaagagagcgaaaag
cggcgcaagctgtccgagaagcacaagctcatccacgcgcccatgagcgacgtcggcggc
gtcatgttcgacaaggacgccgtctacatcaacgtgcccggcaactttaccaggaacgcc
gacggcgagaccgacacgcccgcgggcgagggagagcagatggtcatggacctccaggac
gcccgcgtcaccctcgacgaccgcgccgcgcgcggcgagctgcgcctctttgagtcgtcg
acgtcggcgctgcgggcagacgatcctgccagcgacgacgccgcatcggccaagtcgagg
ggcaagcggactcgccgcgccgcctttgacgacgtccgcctcgacgacgacgagctgggc
gacgacgacgatggcgacgaggaggaggacgacgacgacggccagcttgacgaggaggag
gacggcgaggacatggacgacgacgagggtcgcgagcggaggagcgtcgaccgtcgcggc
cggtccctcgcccggcccatgcccggccaggacagcgacggagacgaggccgacaagggc
aagatcgcctacgccgacagcgactcggacatgggcctcggcagcgaccaggaggacgcc
gaggatgaggatgacgaggaggacgaaatcgcaccgtggaagcgtaatctggccggccgc
gccgagtcggtcgtgctagccaatcgccggagaaaggcggcggacctgacgcggctcatc
tacgcctcggacaagacgccagagcagatcgccagcggcgacatctttgacgacgacgac
gacgacgacgccgacatcgaaaaaatggcccaggccgacgacggcgacgacttcttccgg
cccgcgcaaaaatccagcggcaccgtccacaagggcccgctcaacgaagaggtcgacgag
tgccccgaccagacccgccagcccatcgacgccgccgcagtgtcgcgctgggagagcgag
agggtgctcgactcgatccggcacctcttcatcaccggagacgagcccgacaacctcgag
gagcgcaaggacggcaagcggaacgtggccagcgacgatgaggacgacgacgacgatgac
gaggaagacggggacgagggcgacgacggcaacaacgagtcggcccgcgacgctgcgctg
gccgccaaaaaggcggcgctcaagcgtcggttcgacgagcagtacgacgacccggacgcc
gagggggcgggcgactggtacgacgagcaaaaggacctgctggccaagcaggccgagctc
aaccgcgccgagtttgccgacgaggacgaggacacgcgccacctggtcgagggcttccgc
ccgggcgcctatgtccgcatcgagctgtccaaggtgccgtgcgagctggtcgactacttt
gaccccagcttcccgctcctcgtcggcggcctgctggcgtccgaagagacgttcgggttc
gtccaggtgcgcatcaagcgccaccgctggcatcacaagatcctcaagaccaacgacccg
ctcatcttcagcctgggctggcgccgcttccagagcatccccatctactcgctcgacgac
ggcacgcgcaaccggatgctcaagtacacgcccgagcacatgcactgcctggccaccttc
tacgggccgggctcggcgcccaacacgggcttctgcgccttcaacacgctgggctcggac
aacccgggcttccgcgtcagcgccacgggcgtcgtgctcgacgtcgacgcaggcacgcaa
aagattgtcaagaagctcaagctgaccggcacgccggccaagatctacaagaagacggcc
tttatcaaggacatgtttacctcgtcgctcgaggtggccaagttcgagggcgcgcacctc
aagacggtctcgggcatccgcggccaggtcaaaaaggcgctggccaagcccgagggccag
ttccgcgccacgttcgaggacaagatcctgatgagcgacatcgtcttcctgcgcgcgtgg
tactcgatccagccgcgccgcttctacaacccggtgacgtcgctgctcctcagcccggcg
tcgcgcgcgtggaagggcatgcggctgacgggcgcggtgcggcgcgacgagcgcatcaag
acgccgctcaacgtcaactcgacctacaagcccgtcgagcggcccgagcaccgccagttt
aacccgctccgcgtccccaagaagctccaggccgcgctgccctactcgtccaagcccaag
atgacaaaggcacaggggaagcccacctacctccagcagcgcgccgtcgtgctcgaggcc
gacgagaaaaaggccgtcgctctgctccagcagatgcgcaccgtccagaaggaaaaggtg
cagaagaggcgcgacaagcagacggagcggcgagcggtcaaggccaaggaggccgagaag
caggaggagcggcgcgccgagaagcgcaaggccgagatgaaggaaatttaccgcgccgcc
ggcctcagggatgccaagcggcaaaagctcgccgccaagcgcggcggtcgaggcagcgcg
ggcggcggaggagacgactga
DBGET
integrated database retrieval system
