Pseudozyma flocculosa: PFL1_04799
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Entry
PFL1_04799 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFL1_04799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_04799
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PFL1_04799
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PFL1_04799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
PI3K_P85_iSH2
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
19318899
NCBI-ProteinID:
XP_007880518
UniProt:
A0A061HAN7
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MAARKLQTEIDRTLKKVAEGVEIFEGLYEKLQQSSNHTQKEKLESDLKTQIKKLQRLRDQ
IKTWLQSNDIKDKKPLLDNRKLIETQMERFKACEKEMKTKAFSKEGLIAAARLDPREKAK
MEMSDWLSGMVDELSRQVETTEAEIEVTLGSSKKKKGSAKDERVSAMENQNDRRNWHISR
LEILLRMLENGNLETDRVEGIKDDIAYFVESNAEEDFEEDEGIYDEFNLDDEEEAFGLKD
NDDLQSSHDGASLADVDASPKPNATPSKARRDSEVEMKKDESPAPLAKKVSKKQPSEPPA
LPKEKAVPAANFAQAKAPTSQASVTSPPKAPSAAPLPPIRYAAAAAAAVAPTATSNSTAQ
PGAPGSSTDPTAASPPPSSAAGTADQPSEATTAASPALSNAHSVSQQASAASHPTSVHST
PAPAGGGAGTPAQQAAAQKQAGTEARLPSSLTDLVSSFESAKQKSMRRDSNLTSVHKSLE
SSFMNVPEPLDSDKPKYYVPKNPFPTPAYYPQAPASVFDNPALYSKFDVETLFYIFYYQQ
GTYHQYLAAKELKKQSWRFHKQYLTWFQRHSEPQAITDEYEQGVYVYFDWEGSWCQRKKS
DFRFEYRWLEDN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagaaagttgcaaaccgagatcgaccggaccttgaagaaggtcgcggaaggt
gtcgagatcttcgagggcctctatgagaagcttcagcagtcgtcgaatcacacgcagaag
gagaagctcgagtccgacctcaagactcagatcaagaagctgcaaaggctccgggatcag
atcaagacctggctgcagagcaacgatatcaaggacaagaagccgctgctcgacaatcgc
aagctcattgagacgcaaatggagcggttcaaggcgtgcgaaaaggagatgaagaccaag
gccttctcgaaagagggccttatagcagccgcccggctagacccgcgcgagaaggccaag
atggagatgtccgactggctctcgggcatggtcgacgagctctcaagacaagtcgagacg
accgaggccgagatcgaggtcacgctcggctccagcaagaagaagaagggcagcgctaaa
gacgagcgagtctcggccatggagaaccagaacgaccggcgaaattggcacatctccagg
ctcgagatcctccttcggatgctcgagaacggcaacctcgaaacggatcgcgtcgagggg
atcaaggacgacatcgcctactttgtcgagagcaatgctgaagaggactttgaggaggac
gaaggcatctatgacgagttcaacctcgacgacgaggaagaggcgttcggtctgaaggat
aacgacgacctccaaagcagccacgacggcgcatctctcgctgacgtcgacgcctcgccg
aaaccaaacgccacgccatcaaaggcgaggcgagacagcgaggtcgagatgaagaaggac
gagtcgccggcaccgttggcaaagaaggtctcgaaaaagcagccgagcgagccaccagca
ttgccaaaggagaaggcggtgccagccgccaactttgcgcaagcgaaagctccgacgtca
caggcttcggtcacctcaccaccaaaggcaccgagcgccgcaccgcttccgccgatccga
tacgcggccgccgccgcggcagccgtcgcacctaccgccacgtccaacagcaccgcgcag
ccgggcgcgccagggtccagcacagatccaacggcggcctctccgccgccatcatctgcg
gcgggcaccgcggatcagccttcggaagcgacgacggccgcatccccggcactctcgaac
gcgcacagcgtgtcgcagcaggcatctgccgcctcgcatccgacatcggttcattcgaca
ccggcgcccgccggcggtggagcggggacaccggcgcagcaggcggcggcgcaaaagcag
gcgggcaccgaagcaaggctgccgagctcgctgaccgacctagtgtcgtcgttcgagtcg
gccaagcaaaagtcgatgcgccgggacagcaacctgacgtcggtgcacaagtcgctcgag
tcgagcttcatgaacgtgcccgagccgctcgactcggacaagcccaagtactacgtgccc
aagaacccgttcccgacgccggcctactacccgcaggcgcccgcgtcggtgttcgacaac
ccggcgctctattccaaattcgacgtcgagacgctcttctacatcttctactaccagcaa
ggcacctaccaccagtacctggcggccaaggagctcaagaagcagagctggcgcttccac
aagcagtacctcacctggttccagcgccactcggagccgcaggccatcaccgacgagtac
gagcagggcgtctacgtctactttgactgggagggctcgtggtgccagcggaagaagagc
gacttccgattcgagtaccggtggctcgaggacaactga
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