Pseudozyma flocculosa: PFL1_04975
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Entry
PFL1_04975 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03022
Basal transcription factors
pfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFL1_04975
09124 Replication and repair
03420 Nucleotide excision repair
PFL1_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_04975
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_04975
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PFL1_04975
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PFL1_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
19319075
NCBI-ProteinID:
XP_007880696
UniProt:
A0A061H3N4
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MPSAQAKNTTDVANAGFSHLNAGRGRAALTTRIAPDFLVLIIDVNPIAWTSGSTRNGKQR
EAVHDSDFENALNAIIIFLNAHIAMQHENGLAIYAAGTGRAQLLYTSAPFASRSTTTSSE
AGSAKPDANTYQHFKHVDDKVVEGMKRMARDMRAQLEAASASSSSSSSSTPSSSTSAAAS
KMATTAIVSALAQALCHLNRLALASAANANDPASRFGSSAATTGDTGGGGSAGSTNATAA
PQAFRNRILILSVTPDASTQYIPMMNCIFAAQKKSILIDVCKVFGADTVFLQQAAHLTGG
TYFRIDEAATVEGGAASGLLQCLMSSYLPSRSIRDVMHLPMLDEVDFRAACFCHRRIVDV
GYVCSVCLSLFCEPRPVCLTCQSRYPTHTIERYRQEEALTTAS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcgcaggccaagaacaccaccgacgtcgccaatgccggcttctcgcacctc
aatgcgggccggggcagggcggctctcacgacccgtattgcgcccgactttctcgtcctc
atcatcgacgtcaacccgatagcatggacgtccggaagcacgagaaacggcaagcagagg
gaggcggtgcacgactcggactttgagaatgcgctcaatgccatcatcatctttctcaac
gcccacattgcgatgcagcacgaaaatggcctcgccatctacgccgcaggcacagggaga
gcccagctgctgtataccagtgccccttttgcgagccggtcgacgacgacatcgtcagag
gcaggtagcgccaagcccgacgccaacacctaccagcactttaagcacgtcgacgacaag
gtggtcgagggcatgaagcggatggcccgcgacatgcgcgctcagctcgaagcggcttcg
gcctcgtcgtcgtcgtcatcgtcctcgacaccgtccagctcgacctcggcagcggcgtcc
aagatggcgacgacggccatcgtgagcgcgctggcccaggctctctgtcatctcaaccgg
ctggcgctagcgtcggcagccaacgcaaacgatccagcatcgcggttcggctcgtcggcg
gccacgactggggacacaggcggcggcggctctgccggctcgaccaatgccacggcggct
ccgcaggcgtttcgcaaccggatcctgatcctcagcgtcacgccggatgccagcacgcag
tacatcccgatgatgaactgcatctttgccgcgcagaagaagtcgatcctgattgacgtg
tgcaaggtgtttggcgccgacaccgtctttttgcagcaggcggcgcacctgacgggcggc
acctacttccgcatcgacgaggcggcgacggtcgagggcggtgcggcgagcgggctgctg
cagtgcctgatgtcgtcgtacctgccgtcgcgctcgatccgggatgtgatgcacctgccc
atgctcgacgaggtcgacttccgggcggcctgcttctgccaccggcgcatcgtcgacgtc
ggctacgtgtgttccgtctgcctgagcttgttctgcgagcccaggccagtgtgcttgacg
tgccagtcgcggtatccgacacacaccatcgagcggtaccggcaagaggaggccttgacg
acggcgtcgtga
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integrated database retrieval system