Pseudozyma flocculosa: PFL1_05054
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Entry
PFL1_05054 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp04138
Autophagy - yeast
pfp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PFL1_05054
04148 Efferocytosis
PFL1_05054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfp04131
]
PFL1_05054
Membrane trafficking [BR:
pfp04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
PFL1_05054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
TPR_12
TPR_19
TPR_16
EAD11
Motif
Other DBs
NCBI-GeneID:
19319153
NCBI-ProteinID:
XP_007880774
UniProt:
A0A061HAC8
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MHTAFDCVPLLEGYRDRPEAILVHGAKLFLGSSTGNLSVYRIDATRNTTAETRDAKGQGR
QRGDAGPGDSSFSNSSSIQPRSVSEPIQVSKGFSRRAIERLGVIKETNTLVSLSDGYVSL
HDLSTLGPQMQLAQTKGALTFAIDTSIQKQLASRAPDYGPGPLGGMASIRGSRFAPGGAG
TLGQAFRPGAALDAGSTVGGGSASRTRARLPDSPSRGWQSASLRGMDAIIKHKEEERRRA
VEGARIGGAGGAGNATGDPNEGIMTLVSVLAVGSKRKVTLFRWVDGEFWDTREVPLAHTP
RHLAFPTPTKLFMGYNASEFGVLSVPLASESTVAFTHPASQGPKNGASVRREVHAQPPPS
SSSGPLVDLTAQGPDVWDVCDFDLPSTASETSGSSGQASSGVGGGLGAAFGGLGGYIGMA
GKGKSTVVQMDGGEVLVMRDHAGIFFGADGKPTRRDGIEWPAAPDEVAYAKPYVFAVLPG
GSVPSLKQSSAPNAAFPVLQVRSASTLIAVQTLCFPPLLSPTSPPGYSAPPSVRLLTTSA
SNKPPIYVVVSPTDRGAQERDGSTVWRLDMHGWSQQIDELLQKGEFEEALALLDSVDEVI
LEDKAERRALVQGLYGVYLFSQNRFDEAVEIFTELEMNPAKVLALYPPNVAGDLSRSRDE
WLPIFGGPNVAKVADIEPPSAATTTGTSSLSSSPAGRSANAGIVQPTPRSKLSALLTGMR
PQSIIGEPSAPPSPGRGSPAPAPSPSRDARGRSTLAGESDNADTASIRSVRTTRDSRQPQ
QRGKEPAAGTSAEDIRRKSLDALGRFLADRRRIFKPILESLPHLESKDHMTMSQIKHDSD
WLLSLPNKPLGQLEKGELMAVAQTVDTALFKTFLETKPALVGPLCRVENWCEVEQVEGLL
KERKKLSELIALYGGKEMHGKALNLLRQFSEDEDDDEEKVGPTIRYLQNLGPEFIETILD
ASHWVLERDPKLGMEIFMADTGKVASLPRSDVVADLERFDEDLCATYLEHIINVLDEGDP
EFHDKLIRLYLRKANRLSSQRRHSEGGADGDEARQRQQQRSEVMAKLLAFLRRSSQYRPE
LILGRVPADDDDRDMFEARALLLGRMGQHEGALGIYVRKLKDLDRAEGYCRDVWSARKRL
DEAERLRRATLGYLGRTPQEALQPRQPQTQTRQGGSRQATSTGGGDRGRERDMTDEQRRK
ADEGVFLTLLQVYLRPNGGGAGEGKTASAAAMTAQPSSSSSSEGHQLEAALSLIQRNASR
IDLISALELLPPLVSLQSLESFVRLNLRDQTRRENEAKVIRQIQTMRDLQVDETLCRLQS
RRVKVGEMRTCPRCHKRLGNAVVAVEPLSGAVLHYFCMLNNPDHAPGDRGGPEY
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgccttcgactgcgtcccgctcctcgaaggctaccgcgacaggcccgaggcc
atcctggtccacggcgcaaaactcttcctcggctcctcgaccggcaacctctccgtctac
cgcatcgatgcaacccgcaataccaccgcagagacccgcgacgccaaagggcaaggccgt
caacgcggcgatgcgggccccggcgactcgtccttcagcaactcgtcgtcgatccagccg
cgctccgtctcggagcccatccaggtctcaaagggcttctcgcgccgcgccatcgagcgc
ctcggcgtcatcaaggagacaaacaccctcgtatccctctccgacggctacgtctcacta
cacgacctctccaccctcggcccacagatgcagctcgcacagacaaagggcgccctcacc
tttgccatcgacacctcgatccagaaacaactcgcctcccgcgcgcccgactacgggccc
ggccctctcggaggcatggcctccatccgtggctcccgatttgcacctggtggcgccggc
acccttggtcaagctttccgcccaggcgccgccctcgacgccggctccacagtcggcggc
ggttcagcctccaggacccgcgccagactgcccgactctccctctcgaggctggcagtcg
gccagcctgcgcggcatggacgccatcatcaagcacaaggaagaggagcgtaggcgggcc
gtcgagggagcccgcatcggaggcgctggcggtgccggcaacgcaaccggcgatcccaac
gagggcatcatgacgctcgtctccgtcctcgccgtcggctccaagcgcaaggtcaccctg
tttcgctgggtcgacggcgagttctgggacacgcgcgaggtcccgctcgcccacacgccg
cgccacctcgcctttcccacgccgacaaagctcttcatgggctacaacgcctccgagttc
ggcgtgctctccgtccctctggcgtccgagtcgaccgtggctttcacgcacccggcttcg
caagggcccaagaacggcgccagcgtacgccgcgaggtccacgcccagcctcctcccagc
tcctcttcgggccctctggtcgacctcaccgcccaagggcccgacgtgtgggacgtctgc
gactttgatctgcccagcaccgcatccgaaacgtccgggagctcgggccaggcgtcttcg
ggcgtcggtggcggtctcggtgcagccttcggcggtctgggcggctatatcggcatggcg
ggaaagggcaagtcgaccgtcgtccagatggacggtggcgaggtgctggtgatgagggac
catgccggcatcttctttggcgccgatggcaagcccacccgccgcgacggcatcgaatgg
ccggccgcgccagacgaggtcgcgtacgccaagccctacgtctttgcggtgctgcccggg
ggatcagtgccatcgctcaagcagtcgtcggcacccaacgccgcctttcccgtgctgcag
gtgcgatccgccagcacgctgatcgctgtgcagaccctctgcttcccgccccttctctcg
ccgacatcgccgcccggctactcggccccaccctcggtccgcctgctcaccacgtcggcc
tcgaacaagccgcccatctacgtcgtcgtctcacccaccgaccgcggagcgcaggaaagg
gacggcagcaccgtgtggcggctcgacatgcacggctggagccagcagatcgacgagctg
ctgcaaaagggcgagttcgaggaggcgctggcgctgctcgacagcgtcgacgaggtcatc
ctcgaggacaaggccgagcggcgagcgctggtccagggcctctacggcgtctatctcttc
tcgcagaacaggttcgacgaggccgtcgagatcttcaccgagctcgagatgaacccggcc
aaggtgctcgccctctatccgcccaacgtcgcaggagacctttcgaggagccgcgacgag
tggctgccgatcttcggcggacccaacgtggcaaaagtcgccgacatcgagccgccctcc
gcggcgacgacgacagggacaagctcgctgtcgtcgtcgccagcgggtcgcagcgccaac
gccgggatcgttcagccgacgccgaggagcaagctgagcgcgctcctgaccggcatgcga
ccgcagagcatcatcggcgagccatccgcaccgccatcacccggcagagggagtccagcg
cctgcaccgagcccctccagggacgctcgagggcgatcgaccctggctggcgagtccgac
aacgccgacacggcgtcgatccgctctgtcaggacgacgcgggactcgagacagccgcag
cagaggggcaaagagcctgctgcgggaacatctgccgaagatatccggcgaaagtcgctc
gacgccctgggccggttcctcgcggatcgccggcggattttcaagccgatcctcgagtca
ttgccgcacctcgagtccaaggaccacatgactatgtcgcagatcaagcacgacagcgac
tggctgctctcgctgcccaacaagccgctgggccagctggaaaagggcgagctgatggcg
gtggctcagacggtcgacacggcccttttcaagaccttcctcgagaccaagccagcgctc
gtgggcccgctgtgccgcgtggaaaactggtgcgaggtggagcaggtcgaaggcctcctc
aaggagcgcaagaagttgtcggagctcatcgccctctacggtggcaaggagatgcacggc
aaggcgctcaacctgctccgccaatttagcgaagacgaggacgacgacgaggaaaaggtg
gggccgacgatccgctacctgcagaacctcggcccagagtttatcgagacgatcctcgat
gcgtcgcactgggtcctggagcgcgatccgaagctcggcatggagatcttcatggccgat
acgggcaaggtggcgtcgctgccgcgcagcgacgtcgtggccgacctggaacgctttgac
gaagacctctgcgcgacgtatctcgagcacatcatcaacgtcctcgacgagggcgatcca
gaattccacgacaagctcatccggctctacctgcgcaaggccaaccggctatcgtcgcaa
cggagacacagcgagggcggcgccgatggcgacgaggctcggcagcggcagcagcagcgg
tccgaggtgatggccaagctgctcgcgttcttgcgacgctcgtcgcagtaccggcccgag
ctgatcctgggccgcgtgcccgccgacgacgacgaccgggacatgttcgaggcgcgcgcg
ctgctgctgggtcggatggggcagcacgagggcgcgctcggcatctacgtgcgcaagctc
aaggacctcgatcgcgccgagggctactgccgggatgtgtggagcgcgcggaagcggctg
gacgaggcggagcggctgcgtcgagccacgctgggttacctcggacgcactccgcaagag
gcactgcagccacggcagccgcagacgcagacgaggcagggcggcagccggcaggccacc
tccaccggtggcggtgaccggggccgcgagagggacatgacggacgagcagcggaggaag
gccgacgagggcgtctttttgacgctgctgcaggtctaccttcgtccaaacggcggcggc
gctggcgagggcaagactgcatcggctgcggcgatgaccgcgcaaccgtcgtcttcctcc
tcatcggagggccaccagctggaggctgcgctatctctgatccagcgcaatgcatcgcgg
atcgacctgatcagcgcactggagctgctaccgccgctcgtctcgctgcagtcgctcgag
agctttgtgcggctcaacctgcgcgaccagacgcggcgggagaacgaggcaaaggtgatc
cgccagatccagacgatgcgcgacctccaggtcgacgagaccctgtgccgcctgcagagc
cgccgggtcaaggtgggcgagatgcgcacctgtccgcgctgccacaagcggctgggcaac
gccgtcgtcgccgtcgagccgctcagcggcgccgtgctccactacttttgcatgctcaac
aacccggaccacgccccgggcgatcgtggtgggccagagtactga
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