KEGG   Pseudozyma flocculosa: PFL1_05078
Entry
PFL1_05078        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03030  DNA replication
pfp03410  Base excision repair
pfp03420  Nucleotide excision repair
pfp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFL1_05078
   03410 Base excision repair
    PFL1_05078
   03420 Nucleotide excision repair
    PFL1_05078
   03430 Mismatch repair
    PFL1_05078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfp03032]
    PFL1_05078
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_05078
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_05078
DNA replication proteins [BR:pfp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PFL1_05078
  DNA Replication Termination Factors
   ELG1-RFC complex
    PFL1_05078
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PFL1_05078
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PFL1_05078
  Check point factors
   HRAD17(Rad24)-RFC complex
    PFL1_05078
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_22 AAA_lid_RFC1 Rep_fac_C Rad17 ATPase_2
Other DBs
NCBI-GeneID: 19319177
NCBI-ProteinID: XP_007880798
LinkDB
Position
Unknown
AA seq 353 aa
MLFVDKHRPKTLNELHYHPDLSQRLTSLAEHEDFPHLLFYGPSGAGKKTRITALLRQLYG
PGTYKLKIDQRVFLNPSKRKIDVNIVSSNYHIELTPSDAGNYDRLVIQDILKEIAQTQQV
DLNAKHRFKVVVINEADSLSRDAQSALRRTMEKYMGNLRLILCANSTSKIIAPIRSRCLL
MRVGAPTDQEMTTVLQHVARKEKFTLPSDTAADICADAAGNLRKAILILEALRMQSPELD
SASLSIAKPDWEVYAHKTADLILSDPSPAKLLEVRGKLYELLVHAIPATVIIKTITDRLV
VRLDESLRAAVVEKAAFYELRCRTGSKVIFHLEAFVAQVMHMQKSFLLNMEWD
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgctcttcgtcgacaagcaccgcccaaagacgctcaacgagctccactaccatcccgac
ctctcccagcgcctcacctcgctcgcagaacacgaagacttcccccacctcctcttctac
ggcccctctggcgcaggaaaaaagactcgcatcaccgcactcctccgtcagctctacggc
ccgggcacctacaagctcaagatcgaccagagagtctttctcaacccatcaaagaggaaa
attgacgtaaacatcgtcagcagcaactaccacattgaactaaccccgagcgatgccggc
aactatgatcgcctcgtcatccaggacatcctcaaggagatcgcgcaaactcagcaggtc
gatctcaacgcaaagcaccgcttcaaggtcgtcgtcatcaacgaggcggattccctctcc
agggacgcccagtccgccctccgaaggaccatggaaaagtacatgggcaacctccgcctc
attctctgcgccaacagcaccagcaaaatcatcgcccccatccgttcccgctgcctcctc
atgcgcgtaggcgcaccaacagatcaagaaatgacgaccgtgcttcagcacgtggccagg
aaggagaagttcactctgccttcggacacggcggcggacatttgcgccgatgccgccggc
aacctgcgcaaagccatcttgatcctcgaagcgctgcgtatgcagtcgcccgagctcgat
tcggcctcgctgtcgattgcgaagccagactgggaagtctacgcacacaagacggcggac
ctgatcctgtccgacccgtcgcctgcaaagctgctcgaggtgcgcggcaagctctacgag
ctgctcgtccacgccatccccgccaccgtcatcatcaagaccattaccgacaggctcgtc
gtccgtcttgacgagagtctgcgagccgccgtcgtcgaaaaggctgccttttacgagctg
agatgcaggacaggctcgaaggtgatcttccacctcgaggcctttgtcgcccaagtgatg
cacatgcaaaagtcctttttgctcaacatggaatgggactag

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