Pseudozyma flocculosa: PFL1_05201
Help
Entry
PFL1_05201 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03022
Basal transcription factors
pfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFL1_05201
09124 Replication and repair
03420 Nucleotide excision repair
PFL1_05201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_05201
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_05201
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PFL1_05201
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PFL1_05201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
19319298
NCBI-ProteinID:
XP_007880921
UniProt:
A0A061H3W8
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MATSSTAHLHAAVAFKQVAGTLAAHANGTLSWTPSTTSSSVAAFTINYVDIAGLQTSKQG
AEQTALMVALANGAQVAGKSKVLLIFNAEPQTALDNREAFKSELTTAIMNNRAAQQQPAA
SASASGSSTPLTAGFASSRPPSVPSSPAPAARRVATPDVASSSGLSSPGQSFAKRSDTAS
DPLMPLTDNKLRVSVLRSDKNLRNLHMDVVVIGGAMKDEDFWSHPQRQALIRAERARLEQ
RRGRNARLADPKPAHNEAGELKLNVSNELIADIFEQFPVVARAYEENVPSKLDQSAFWQR
YFQSKLYHRLRTSARSAASEHIVQDDPVFDKYLEDEDDQLEPRRLRNPHDRLLDLAATEE
DHQETGNTKDWTMRAGAERRTLPLMRRFNDHSQSLLDSALGEQEEAERRARRVVGGVGEE
YDANDPTARENVEAIKARYYREIEIDDLNESERTERVRLNVSELDGYPQSQDRNQSVANG
ADEAAGEGVGRKRKRANEDDGSIPRTIEEVRATVERFDADIKGWMPQLGDYKPRKGESEV
AMKVMLRNVRSRTTDRGVNDLKTLPATLQKTTTSIQASTTEFLRQLWSCLSPSSAPLGDA
AENKATNWKDVQASNLSSSSSAAAGVDAEGVAGDAAREREKEERLERARKMVSSLEKSLD
KMQNVQLEAEEEHGVDAARKVATALAPTRQAVEKALKIRIE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcttccactgcacacctgcatgcggccgtcgcattcaagcaggtggccggc
accttagccgcgcacgcaaacggcaccctctcctggaccccctcgaccacatcctcgagc
gtcgccgccttcaccatcaactacgtcgacatcgccggcctccagacatcgaagcagggc
gcagagcagaccgctctcatggtcgctttggcaaacggcgcccaggtcgcaggcaagtca
aaggtgctcctcatcttcaacgcagagccgcagaccgctctcgacaaccgcgaagccttc
aaaagcgagctcaccaccgccatcatgaacaacagggcagcacagcagcagccagccgcc
agcgccagcgccagcggctcctcgaccccgctcactgcgggcttcgccagctcgcgtcca
ccttcggtcccctcatcgcccgccccggctgccaggcgagtcgccactccggacgtcgcc
tccagctccggcttgagctcaccaggacagtctttcgccaagcgcagcgacacggcctca
gacccgctcatgcccctcacagacaataagctgcgcgtcagcgtcctccgttccgacaag
aacctgcgcaaccttcacatggacgtcgtcgttatcggcggcgccatgaaagacgaggat
ttttggtctcatccacagcgccaggcgctcatccgcgcagagcgcgcaaggctagagcag
cgccgaggccgcaacgcccgcctcgcagaccccaagcccgcgcacaacgaggcgggcgag
ctcaaactcaacgtctccaacgagctcatcgccgacatttttgagcagttccccgtcgtc
gcgcgcgcgtacgaggagaacgtgccatccaagctcgaccagagtgccttctggcagcgc
tacttccagtccaagctgtaccaccgcctccgcacgtcggcgcggtcagctgcatcggag
cacattgtccaggacgatcccgtctttgacaagtacctcgaggacgaggacgaccagctc
gagccgcgccgcctgcgcaacccgcacgaccgcttgctcgacctggcggcgaccgaagag
gaccaccaggagacgggcaacaccaaggactggaccatgcgtgccggcgccgagcgcagg
acgctgccgcttatgcgccgcttcaacgatcattcccaatcgctgctcgactcggccctg
ggcgagcaggaggaggccgagcgtcgcgcccgccgcgtcgtcggtggcgtgggcgaggag
tacgacgccaacgaccccaccgcgagagagaatgtcgaggcgatcaaagctcgctactac
cgcgagattgaaatcgacgatctcaacgagtccgaacggacggagcgagtgcggctcaac
gtgagcgagctcgacgggtatccgcagagccaggaccgcaaccagtcggtggccaatgga
gccgacgaggcggcgggtgaaggggtgggacggaagcgcaaacgggccaacgaggacgac
ggcagcatcccgcgcacgatcgaagaggtgcgcgccaccgtcgaacggttcgatgccgac
atcaagggatggatgccccagttgggcgactacaagccgcgcaagggcgagagcgaggtg
gcgatgaaggtgatgctgcgcaacgtccgcagccgcaccacggataggggcgtcaacgat
ctcaagacgttaccagcgacgctgcaaaagacgacaacatcgatccaggcgtcaacgacc
gagttcctccgacagctatggtcatgcctctctccgagctctgcacctctgggggacgcg
gcagagaacaaggcgaccaactggaaagacgtgcaggcttccaacctctcgtcctcctcc
tcggccgccgccggcgtcgatgctgaaggtgtagcgggagatgcggctagggagagggaa
aaggaggagaggctagagcgagcgcgcaagatggtctcgagtctggaaaagtcgctggac
aagatgcagaatgtccagctcgaggcggaggaggagcatggcgtcgatgcggcgagaaag
gtggctaccgcactcgcgcccacccgacaggctgttgagaaggcgctcaagatcaggatc
gagtga
DBGET
integrated database retrieval system