Pseudozyma flocculosa: PFL1_05220
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Entry
PFL1_05220 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PFL1_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfp03036
]
PFL1_05220
Chromosome and associated proteins [BR:
pfp03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
PFL1_05220
SWR1 complex
PFL1_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
19319317
NCBI-ProteinID:
XP_007880940
UniProt:
A0A061H3C0
LinkDB
All DBs
Position
Unknown
AA seq
2000 aa
AA seq
DB search
MSRPSTLSGHESEPEEQATAGVGTRPSSATNPKASDGSVRSDARSRHSRRSSAEQAPASG
SSLPQHAVDRDGKSDRNGSTARPHAKRRRLDADLGFSSPGPAFRIVPEDDTASSSGAESN
GNGRPRRARRSVIGSGSSNKDAAQSSPVISKSRLQPIASVANPRKASPAKADSTSGRDGG
HPARGRSRSSALGSANAPEAALRNGRAPPTDLRDEVADEPDDALASDNDGKDPGASATPL
AVDRGPRTRITPITASTAQRPFDEILALRRQERLQASQEALEDVHDDHDMLVRELFHLVK
FVTLIGYDPEVAKQDRSDVFSQFQQEHDLRFALEADGAGPSGSRGGRVTRRGVNARLEGL
SLKRAQPPATPVATAATEQPTSSTSKRRESSARLSRRSASLAFDDADDSAGSAEPGPSTG
GKRKANHRDGESKKQGRARTSANGRIVELADSPSTARDRRSSFGKKGKARRRDDGAGPPL
DDDLDEFIRRHRQPRALPDTPPPIRALAPQHIPQPPAFRGSVCDLWASFRYVDDEELDPR
QADEAEQELLEAYLRVDRGRRSGLMALDDGEGHLAHLRPHKAPRSRDRQDHLLEAMVSMS
QQMRQNHKQRITLAKRVSRMVAAYWDRQSGSSERERRAEERRLRALAKWTVREVAKQWRL
AANVVRARKAAREKAEKDKLDKEQLNAILEKSTQMLQKQHEEMARMDLGSSSSDSERSFY
DVDEEEEEELEGDDGAGTDTDAGSQTGSESEAVSVVSAGSRLSIKSGGDGGRRLVEMLDN
EETGRFTTPSPAPAIEEQATEARDEPPSLRGLDVTSGQEDSLSAVDEADNPSVGAMDRDD
AADAPARRTPRTRRSTRSASLASSSAATGPATPDPDGEDVDFSAVDPEAAAEDEELERKM
WEEDEADDSEDAGLAADADVPIEELLKRYGYGNGGEGTESVDATEDEEEGGENKEVAAAA
DTAAKQDLDITAADEPADAMSGIETPPLPTQSGGPPDDDSIRAEMAPTARTKTESIASDV
ESADEDEDEDEGEGEKAGEGAGAAAARSRSMTRASSSSVLHTPDRANSASASASGAGTGR
SRQPFLLRGQLRPYQQIGFEWLAGLYANGVNGILADEMGLGKTIQTIALLAHLACDRGVW
GPHLVVAPTSVMLNWEVEFKKFLPGFKILSYFGSQRERKEKRVGWNTENAFNVCITSYQL
VLADQHIFRRKPWVYLVLDEAHHIKNFRSQRWQTLLGFNSQRRLLLTGTPLQNNLMDLWS
LMYFLMPHGVADLPGGGAFASMKDFQERFSRPLDRAIEGGGAAAMDDEMRAMIHKLHTVL
RPYLLRRLKSEVERELPSKYEHVIRCRLSKRQRFLYNDFMSRAKTRESLASGNYLSIINC
LMQLRKVCNHPDLFEVRPIVTSFAMQRSAVADYEVKELLVRRRLLQQQQQQQQQTPSMQL
PGRQGVPLDRVDLDAIGLRITAHEEEAHLTPILSRNLRRLDASRKLPFFREPARPRLTAG
GVVGGDDGNDAKTETEAAARDAEIDTWSLDGFRRTLAQKRHRAEVERWNHAAYVNHLRCL
RRPIYGKSVISLVRKLGEGGRLLPLEAVEADRRGFLDRCDNVSRLVVSNAARVESLQPTI
DRFAFVTPRAVAVDMPRYALPGLTPALDARLADPRFDTLHPVAVKLHIAFPDASLLQYDC
GKLQQLDVLMRRLKEGGHRILIFTQMTKVLDILEAFLNHHGYRYLRLDGATKVEQRQALT
EKFNRDLRISAFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIGQTRDVH
IYRFVSEHTIEENMLRKANQKRQLDSVVIQEGDFTTEKLVDQLGGTRGSGGAGAGAGGGG
RERIGWRDMLDDDGAIEGVKVQLQGDGNGAGGAGGGSGIIDDERALAEVEDEEDRIAANQ
AREEMGMDQLDFGDEGKRISAKAAETGAAAATDSRQLSETPADGDEADDGEDEGDDDEDE
GGTIDEYMLRFVEADWDHFA
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcccatcgacactctccggtcatgaatccgaacccgaagagcaggcgacggca
ggcgtaggtactcgaccctcgagcgctacgaacccgaaagcatccgacggctcggtccgg
tccgacgcccggtcacgacacagccgtcggagctctgccgagcaagcccccgccagtgga
tcgtctctgccccagcacgccgtcgaccgcgatggtaaaagcgacagaaacggctccact
gcccgtccgcatgcaaagcgccggcggctcgatgccgatctcggcttctctagcccggga
cccgccttcaggatcgtccccgaggacgacactgctagcagcagcggcgccgaaagcaac
ggcaatggccgcccgcgacgagcccgtcggagtgtcataggaagcgggagcagcaacaag
gacgccgcgcagtccagcccggtgatctccaaatcacgtctgcagccgattgcatcagtc
gcgaaccctcgcaaagcttccccagccaaggctgacagcaccagcgggcgcgacggcggc
caccccgctcgcggtcgctcgagaagctccgcattgggctcagcgaatgccccggaagca
gctcttcgcaatggtcgggcgcctccgaccgaccttcgcgacgaagttgccgacgagcct
gatgacgctctcgcctcggataatgatggcaaagaccctggtgcatctgcgacgccgctc
gcggtggaccgcggtcctcgcacccgcatcacgcccatcactgcgtcgacggcccagcgt
ccgtttgacgagatcctcgcgctgaggagacaggagcggcttcaagcgtcccaggaggcg
ctcgaggacgtccatgatgaccacgacatgctcgtccgcgagctcttccaccttgtcaag
tttgtcaccctgatcggctacgacccagaggtggccaagcaggatcgcagcgacgtcttt
tcgcagttccagcaggagcacgacctccgcttcgccctcgaggcggacggcgctgggcct
tcaggatcccgaggcggccgcgtcacccggcgcggcgtcaacgcccgactcgagggtctc
tcgctgaaacgagcacaaccgccggcgacgcccgttgctaccgccgcaacggaacagccg
acatcgtcaacgtctaaacgtcgggagagctccgcgcggctcagccgtcggtccgccagc
ctggcctttgacgatgcggacgacagcgccgggagcgccgagccgggtccgagcacgggt
gggaagcgtaaggccaaccaccgagacggcgagagcaagaagcagggcagggcgaggacc
tcggccaacggccgcatcgttgagctggccgacagcccctcgacggctcgggaccgacgt
tcttcattcggcaaaaagggcaaggccaggcggagagacgatggtgcaggccctcctttg
gacgacgacctcgacgaatttatccgtagacaccggcagccccgtgcgctacccgacacg
ccgccgccaatacgggcgctggcgccgcagcacataccgcagccccctgcgttccgaggc
tccgtctgcgacctttgggcgtcgtttcgatacgtcgacgacgaggagctcgaccctcgt
caggcagacgaggccgaacaggagctgctcgaggcgtacctccgggtcgaccgcggcaga
cgtagcggtctgatggcgcttgacgacggcgagggccatttggctcaccttcgaccgcac
aaggcgccccgaagccgcgatcgccaagaccacctgctcgaggccatggtttcgatgtcg
cagcagatgcggcagaaccacaagcagcgcatcaccctggccaagcgagtgtcgcgcatg
gtcgcggcctactgggaccgccagtcgggatcgagcgagcgcgagcggcgcgccgaggag
aggcggctgagggcactcgccaagtggacggtgcgcgaggtcgcaaagcagtggcgactc
gccgccaacgtcgtgcgtgccaggaaggcggcccgcgaaaaggcggaaaaggacaagctc
gacaaggagcagctcaatgccatcctcgagaagagcacgcagatgctgcagaagcagcac
gaggagatggcgcgcatggacctcggcagctcgagcagcgacagcgagcgcagcttctat
gatgtggacgaggaggaggaggaggagcttgaaggcgacgacggcgctggcaccgacacc
gacgcgggctctcagaccggttcggagagcgaggcggtgagcgtcgtctcggccggcagc
aggctaagcattaagagcggaggcgacgggggcaggcggctggttgagatgctcgacaat
gaggaaacgggccgattcacgacaccgtcgcccgcaccggctatcgaggagcaggcgacg
gaggcaagagacgagccgccatcccttcgaggccttgatgttacctccgggcaggaggat
tcgttgtctgctgtcgacgaggcggacaacccctcggtcggggccatggatcgagacgat
gctgccgacgcacccgctcgacgaacacctcgcacccgacgatcgacgcgatcagcatcg
ctcgcctcgtcctcagccgcgaccggccctgccacgcccgacccggatggcgaagacgtc
gacttctccgccgtcgacccggaggctgcggccgaagacgaggagctggagcgaaagatg
tgggaggaggacgaggcggatgacagcgaggacgccggcctggccgccgacgccgacgtg
ccgatcgaagagctcttgaagcgctacggatacggcaacggcggcgagggtaccgagagc
gtggacgccaccgaggacgaggaagaaggcggcgagaacaaggaagttgccgccgctgcc
gataccgcagcgaagcaagatctcgacattactgcagcagacgagccggccgacgccatg
tccggcatcgagaccccgccgctgccaactcaatcaggcgggcccccggacgacgacagc
attcgtgcagagatggcgccgactgcccgcaccaagaccgagagcatcgccagcgatgtc
gagtcggccgacgaggacgaggacgaggacgagggcgagggcgagaaagcgggagaaggg
gcgggcgctgctgctgctcgctcgcgctccatgacccgcgcgtcgtcatcgtcggtcctc
catacgcccgatcgggcaaactcggcgtcggcgtcggcttcgggcgcggggaccggccgc
tccagacaaccgttccttttgcgcggccagctgcgcccctaccagcagatcggctttgag
tggctggcgggcctctacgccaacggcgtcaacgggatcctggccgacgagatgggcctc
ggcaagacgatccagacgattgcgctgctagcacatctggcgtgcgatcgcggcgtgtgg
ggtccgcacctcgtcgtggcgccgacgagcgtgatgctcaactgggaggtcgagttcaaa
aagttcctgccgggcttcaagatcctgtcgtactttggcagccagcgcgagcgcaaggag
aagcgcgtcggctggaacacggagaacgcgttcaacgtgtgcatcaccagctaccagctg
gtgctggccgaccagcacatcttccggcgcaagccgtgggtctacctcgtgctcgacgag
gcgcaccacatcaagaacttccgctcgcagcgctggcagacgctgctcggcttcaactcg
cagcgccggctgctgctgacgggcacgccgctgcagaacaacctcatggacctgtggagc
ctgatgtactttctcatgccccacggcgtggccgacctgcccggcggcggcgcctttgcc
agcatgaaggacttccaggagcggttttcgcggcccctcgaccgcgccatcgagggcggc
ggcgccgcggccatggacgacgagatgcgcgccatgattcacaagctgcacacggtgctg
cgcccctacctgctgcggcggctcaagagcgaggtcgagcgcgagctgcccagcaagtac
gagcacgtcatccgctgccgcctctcgaagcgccagcgcttcctgtacaacgactttatg
tcgcgcgcaaagacgcgcgagagcctggccagcggcaactacctcagcatcatcaactgc
ttgatgcagctgcgcaaggtgtgcaaccatccggacctgttcgaggtgcgaccgattgtc
accagctttgccatgcagcgctcggccgtggccgactacgaagtcaaggagctgctggtg
cgccgacggctgttgcagcagcagcagcagcaacagcagcagacgccgtcaatgcagctt
ccagggcggcagggcgtccccctcgacagggtcgatctcgacgccatcggcctgcgcatc
acggcgcacgaagaggaggcgcacctcacgcccatcctcagccgcaacctgcgccgcctc
gatgcgtcgcgcaagctgccgttttttcgagagccggcgcgcccacgccttactgccggt
ggcgtcgtgggcggcgacgacggcaacgacgccaagaccgagaccgaagctgcggcccgc
gacgccgagatcgacacttggagcctggacggcttccggcggacgctggcgcagaagcgg
caccgcgccgaggtggagcggtggaaccacgcggcctacgtcaaccacctgcgctgcctg
cgccggcccatctacggcaagagcgtcatctcgctggtgcgcaagctgggcgagggcgga
cgtctgctgccgctcgaggccgtcgaggcggatcgccgcggcttcctggaccggtgcgac
aacgtgagccggctggtggtgtcgaacgccgcgcgcgtcgagtcgttgcagccgaccatt
gaccggttcgcctttgtgacgccgcgcgccgtggccgtcgacatgccgaggtacgcgctg
cccggcctgacgcccgcgctcgacgcccgcctggcggatccgcgcttcgacacgctgcac
ccggtggccgtcaagctgcacattgcctttccggacgcgtcgctgctccagtacgactgc
ggcaagctgcagcagctcgacgtgctgatgcggcggctcaaggagggcggccaccgcatc
ctcatctttacgcagatgaccaaggtgctcgacatcctcgaggccttcctcaaccaccac
ggctaccgctacctccgcctcgacggcgccacaaaggtcgagcagcgccaggcgctcacg
gaaaagttcaaccgcgacctgcgcatctcggcctttatcctcagcacgcgctccggcggc
ctcggcatcaacctgacgggcgccgacacggtgctcttctacgacctcgactggaacgcc
gccatcgaggcgcagtgcatggaccgcgcccaccgcatcggccagacacgcgacgtccac
atctaccggttcgtgtcggagcacacgattgaggaaaacatgctgcgcaaggccaaccag
aagcggcagctcgacagcgtcgtcatccaggagggcgacttcaccaccgagaagctcgtc
gaccagctcggcggcacccgcggcagcggcggtgcgggcgctggcgctggcggtggtggg
cgcgagaggatcgggtggagggacatgctcgacgacgacggcgccatcgagggcgtcaag
gtgcagctgcagggcgacggcaacggcgccggtggtgctggcggtggcagtggcatcatc
gacgacgagagggccctggccgaggtcgaggacgaggaggaccgcatcgccgccaaccag
gcgcgcgaggaaatgggcatggaccagctcgactttggcgacgagggcaagcgaatttcg
gcgaaggcggccgaaacaggagctgccgctgcgaccgattcgaggcagctgtccgagact
cctgccgatggtgacgaggccgacgatggcgaggacgaaggggacgacgacgaagacgag
ggtgggacgatcgacgagtatatgctcaggttcgtcgaggccgactgggaccactttgcc
tga
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integrated database retrieval system