KEGG   Pseudozyma flocculosa: PFL1_05262
Entry
PFL1_05262        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K10609  cullin 4
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03420  Nucleotide excision repair
pfp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PFL1_05262
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFL1_05262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pfp04121]
    PFL1_05262
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_05262
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfp04147]
    PFL1_05262
Ubiquitin system [BR:pfp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     PFL1_05262
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PFL1_05262
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PFL1_05262
Exosome [BR:pfp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   PFL1_05262
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 CPxCG_zf HbrB
Other DBs
NCBI-GeneID: 19319357
NCBI-ProteinID: XP_007880980
UniProt: A0A061H5R3
LinkDB
Position
Unknown
AA seq 838 aa
MFGLHSQQHRGDTGPLAAALAPSRTANIHSIDAPPTSSHGAAVPALGFGAFLRHATHVKA
ASGTVLRATPRALDPASTARLPDRHASSSAIELVRAVRHLLALSSTPADRAALPSLESLY
AITELQLTANAAGIDDLYDRIKIEMERAAGELARYLAASGTTDETPDSALSWLATLSDAW
TGWLDRVSLVQSVLLPLDRELAASASTSSSSRGHASSQSQTSRIWDLAIDTFALQVLEND
SLSRRALACIALGLDADRAGTAPYHKLHAALVQMYTRLGAYPQLEKAVCQATERFYRDES
AARMAQQAASVGGYLAYADTRVREETERGAWLLSDDAGRKRNLDVALSALVAAHLERLIA
GLPELIEARRLDDLGRLFALLRSVDALPSLRTAFADHIKAAGGLIVNDRERDDEMIERLL
EFKAAIDRIVADGFGREPSFVHAQRDSFEVFVNRRENKPAELIAKFLDVKLRSGNKTMTD
DELERCLDEALVLFRYTHDKDMFEEFYKRHFAKRLLLNRSASSDAEKSMLLKLKEECGPG
FTAKLETMIKDVELSRDLMQEYAQARAKAAKESGGAESDAFDLSVSVLTQAHWPTYPQVD
VILPADMAATTDHFVRFYQNRNSGRRLHWQHSLGTLSLVATFPKAGTKELNVSTFQAIVL
LLFNGGAAGEAGGGGSSSSSSKLSYRDIRAQTGLEDKELKRTLQSLACGQIPTRVLRKVP
QGKDVDDDDEFEFNERFKNERHRIRINQIQLKETAEEQKSTEQRVFLDRELILQAAAVRV
LKARKTIKHSELITEVVDQIKSRFAIDVSEIKKTFEILIDKEYMERVEGERGMYRYLA
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgtttggccttcactcgcagcagcaccgcggcgacaccggaccgctcgccgccgccctg
gcaccatctcgcacagccaacattcattcgatcgacgccccgccgacgtcgagccatggc
gccgccgtccccgccctcggcttcggcgccttcctccgccatgccacccatgtaaaggcc
gcctcgggaaccgtcctccgcgccactcctcgcgcactcgatcctgcctcgaccgctcgc
ctgcccgaccgccatgcctcgagctcggccatcgagctcgtccgcgccgtacgacacctc
ctcgccctctcctcgacccccgcagaccgcgcagccctcccctcgctcgagtccctctac
gccatcacagagctccagctcacagcaaacgcggctggcatcgacgacctctacgaccgc
atcaagatcgaaatggagcgcgccgccggcgagctcgcgcgctacctcgccgcatcgggc
accaccgacgagacgcccgacagcgcactctcctggctcgcgaccctctccgacgcctgg
accggctggctcgaccgcgtgtctctggttcagagcgtcctcctccccctcgaccgcgag
ctggccgcctcggcctcgacctcgtcgtcgtcgcgtggccatgcctcctcgcagagccag
acatcccgcatctgggacctcgccatcgacacattcgccctccaggtgctcgaaaacgac
agtctctcccgccgcgcgctggcgtgcatcgccctcggcctcgacgccgatcgcgcgggc
accgccccgtatcacaagctccacgccgccctcgtccagatgtacacccgcctcggcgcc
tacccacagctcgagaaggccgtctgccaggccaccgagcgcttctaccgcgacgagtcg
gccgcccgcatggcccaacaggccgcctccgtcggcggctacctcgcctacgccgacacg
cgcgtgcgcgaggagaccgagcgcggcgcctggctcctctccgacgacgccggccgcaag
cgcaacctcgacgtggccctctcggcgctggtcgccgcgcacctcgagcggctcatcgcc
gggctgccggagctgatcgaggcccgccgcctcgatgacctcggccgcctgtttgcgctg
ctcaggagcgtcgacgcgctgcccagcctccgcaccgcctttgccgaccacatcaaggcg
gccggaggcctcattgtcaacgaccgcgagcgcgacgacgagatgattgagcgcctgctc
gagttcaaggcggccatcgaccgcatcgtcgccgacggcttcgggcgcgagccgtccttt
gtccacgcccagcgcgacagcttcgaggtgtttgtcaaccggcgcgagaacaagccggcc
gagctcatcgccaagttcctcgacgtcaagctgcgcagcggcaacaagaccatgactgac
gacgagctcgagcgctgcctcgacgaggcgctcgtcctcttccgctacacgcacgacaaa
gacatgtttgaggagttctacaagcgccactttgccaagcgcctgctcctcaaccgctcg
gcctcgtcggacgccgaaaagagcatgctcctcaagctcaaggaggagtgcgggcccggc
ttcacggccaagctcgagaccatgatcaaggacgtcgagctgtcgcgggatctgatgcaa
gagtacgcccaggcgcgcgccaaggccgcaaaggagagcggcggcgccgagtcggacgcc
ttcgacctgagcgtcagcgtgctgacccaggcccactggccaacgtacccgcaggtcgac
gtcatcctgcccgccgatatggcggctaccaccgaccactttgtccgcttctaccagaac
cgcaacagcggccggcggctgcactggcagcactcgctgggcacgctgtcgctcgtcgcc
acgttccccaaggcgggcaccaaggagctcaatgtgagcaccttccaggcgattgtgctg
ctgctcttcaacggcggcgcggcgggcgaagcgggcggcggcggcagcagcagcagcagc
agcaagctctcctaccgcgacatccgcgcccagacgggtctggaggacaaggagctcaag
cggacgctgcagagcctggcgtgcggtcagattccgacgcgggtgctgcgcaaggtgccg
cagggcaaggatgtcgatgacgacgacgagtttgagttcaacgagcgctttaaaaacgag
cgccaccgcatccgcatcaaccagattcagctcaaggagacggccgaggagcaaaagtcg
accgagcagcgcgtgtttctcgaccgcgagctcatcctccaggcggccgcggtgcgcgtc
ctcaaggcgcgcaagacgatcaagcactcggagctcatcaccgaggtcgtcgaccagatc
aagagccgattcgccatcgacgtgtccgagatcaaaaagacgtttgagatactgattgac
aaggagtacatggagcgagtcgagggcgagcgtggcatgtaccgctaccttgcctga

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