Pseudozyma flocculosa: PFL1_05468
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Entry
PFL1_05468 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFL1_05468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_05468
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_05468
03029 Mitochondrial biogenesis [BR:
pfp03029
]
PFL1_05468
Enzymes [BR:
pfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
PFL1_05468
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
PFL1_05468
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
PFL1_05468
Mitochondrial biogenesis [BR:
pfp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
PFL1_05468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
Motif
Other DBs
NCBI-GeneID:
19319558
NCBI-ProteinID:
XP_007881195
UniProt:
A0A061H2Y0
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MAPEKRPAPGAAGRSSANPNRANAASSSSSQSPSSSSSNAQAPPPNWKKRKFEKAQSARH
IQTQMPRSTSSAHPPSASTSASKHHTSSSSASALASAARTANTAQPQPLPPQLDLEAAIS
SRAFQIRSFQNALRNAKNANTTRAWQLLPRHARRRAASHNLLRLPTRLRPKARSELSASN
TLAKTRAQIRSRLPTHGIVRATLRRQKLAQRAAHPNRKWLETHLWHAKRFRMSIDKGKSK
ESDQGVQTSRWGFVLPETTMMKSHKASWRSALEKVTLHDASYHAVFRLGAERILPPSQTL
SAEAEHDAWTLLLTLLDQALDRAGISTAAASPGNDTQASADGAVQVDAILTAQRPSTSAS
TAAQARAAIAPVRILRLPQRLRFIEPDQQAASLLSRRQAKKKAKTSKDKAMPGDEATSMG
LDETENAAPCPGRLTRIIRTEALLVIHPAAALDLRRALKHAGVIMTDEDKATVQLESANV
VRLTATQLDSAPDPWVAAGGKDTTASKLKKRKRAQSMAATSSSWSSSSAPASSQDFQEWT
VLDRAMQRQRQHGFNIFELVGPDAGKLLASVLKPIERGQPARGSSAGDAHAANSKEAFHA
LKCQPAVVPTDTSKAKANKGARAPPARPLLPDNTVLAFEVHDPRLSFPPKLVPTKSPEVK
QQPIRPAAELASSRLLAYGATAPRFSKGEIDSRRAKLPIPGTRLKPDSRDDIVPVVVIRR
RLTTRNPAPPQPPSSTSARDGEGERDSGSGSAGSSGSGVDGYTLILPRGWGMAFFLSLAN
THQSGSSKGARVLGQRQIQHQSLEIAALRTEVPAIASSASPDSAGAADGQASSSAVAVDD
GAAPARQAFEGLFFPRDWIGTRAYAEIEKEACARRKDEWARRPKGKRVEHVFVDESAVRP
LWTTEDASAPAATHALAANDQYQSKSRSESESKVSSQPSAGEVVAALQARLRSDRLGTSR
PFPFGGVGVWEWLSANSERLFGAARPGHDPRAGADSGSNSNSITSGGGGEDKPWLLPLTQ
SECYDVDALTRRVDEAARRGSHVYANALVPVKLSLTRKGTAEELSSVLLPPSYDDQQMWM
QHVDVSKHPLSLLCKKPSGSGGAALLDRETVKREVERRLERLQLGRSAPPLPTALGHAKR
TVEAQLGATGTAAAAAAAMVVPSEAELDGVHDRCADWNGSVGMVLSGDYALGRGRGFGIA
AMTLKAWIEVVKREEQTRTRCDEAATRAGAGSGGGRKKRNPVESRFLVLVRAVGSDVVRP
CTAVPIHL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgaaaagaggcccgcgcccggcgcagcgggtcgctccagcgccaacccgaac
cgcgcaaacgccgcatcatcatcctcgtcacagtcaccgtcgtcgtcgtcttccaacgcc
caagccccaccaccaaactggaagaagcgcaagtttgaaaaggcccagtccgcacgccac
atacagactcagatgccacgatccacctcctccgcgcacccaccctctgcatccacatcc
gcttccaagcaccacacatcgtcgtcgtcagcctcggcattggcatcggcagcgcgcacc
gccaacaccgcacagccccaacccttacccccgcagctcgacctcgaagccgccatctct
tcgcgcgccttccagatacgctcctttcagaatgccctgcgcaacgccaaaaacgcaaac
actacaagggcatggcagctcctcccaaggcacgcccgcaggagggccgcatcccacaac
ctcctccgcctccccacccgcctccgcccaaaggcccgcagcgagctcagcgccagcaac
accctcgcaaagacgcgcgcccagatacgcagccgcctccccacacacggcatcgtccgc
gccaccctccgccgccagaagctcgcacagcgcgccgcccaccccaaccgcaagtggctc
gagacccacctctggcacgcaaaacgcttccgcatgtcgatcgacaagggcaagtcaaag
gagtcggaccagggcgtacagacctcgcgctggggtttcgtgctgccagagacgaccatg
atgaagagccacaaggccagctggaggagcgcactcgaaaaagtcaccctccacgacgcc
agctaccacgccgtatttcgccttggcgccgagcgcatcctcccaccatcccagacgctc
agcgcagaggcagagcacgatgcctggaccttgctcctcacgctcctcgaccaggcactc
gaccgagccggcatctcgaccgccgccgccagtccgggcaacgacacacaggccagcgcc
gacggcgccgtccaggtcgacgccatcctgaccgctcagcgcccctccacctccgccagc
accgcagcgcaggcgagggccgccatcgcgcccgtccgcatcttgcgcctcccccagcgc
ctacgattcatcgagccggaccagcaggcagcctcgttgctctccaggcgacaggcaaag
aaaaaggccaagacgagcaaggacaaggccatgccaggagatgaagctacgtccatgggt
ctcgacgagaccgagaatgctgccccttgccccggccgcttgacccgcatcatccggacc
gaggctctcctcgtcatccaccccgcggctgccctcgacctccgtagggccttgaagcac
gctggagtcatcatgaccgacgaagacaaggcgaccgtccagctcgagagcgcaaacgtc
gtcaggctgacggcgacccagctcgacagcgccccagacccctgggtcgccgccggcggc
aaggacaccaccgcgtccaagctcaagaagcgcaagcgggcccagagcatggcggcgacc
tcgtcgtcgtggtcgtcgtcgtcggccccggcatccagccaggacttccaggaatggacc
gtcctggaccgggcgatgcagaggcagcggcaacatggcttcaacatctttgagctggtc
gggcccgatgcgggcaagctgctcgccagcgtgctgaagcccatcgagcgcggccagccg
gctcggggcagctccgccggcgatgctcacgccgccaactccaaggaggcgttccacgcg
ctcaagtgccagccggccgtcgtgcccaccgatacgagcaaggcaaaggcgaataagggc
gcaagggcaccgccagctcgcccgctcctgccagacaacaccgtcctggcgtttgaggtg
cacgatccgcggctctcgttcccgcccaagctcgtgccgaccaagtcgcccgaggtcaag
cagcagcccatccggcccgcggccgagctggcctcgagccgcctgctggcgtacggggcg
acggcgccgcgcttcagcaagggcgagatcgactcgcggcgcgccaagctgcccatcccg
ggcaccaggctcaagcccgactcgcgcgacgacattgtgcccgtcgtggtgatccgacgc
cgcctgaccactcgcaaccccgcaccgccgcagccgccatcgtccacatcggcgcgggac
ggagagggagagcgagacagcggcagcggcagcgcgggcagcagcggcagcggggtcgat
gggtacaccctgattctgccgcgcggctggggcatggcctttttcctgagcctcgccaac
acgcaccagagcggctcgagcaagggtgcccgcgtgctgggccagaggcagatccagcac
cagagcctcgagattgccgcgctccgcaccgaggtgcccgccatcgcgtcctcggcgtct
cccgactcggcgggtgcggccgatgggcaggcgagctcctctgccgtcgccgtcgacgac
ggggcggcacccgccaggcaggcgttcgagggcctctttttcccgcgcgactggatcggc
acgcgcgcctatgccgagatcgagaaggaggcgtgcgcgcggcgcaaggacgagtgggcg
cggcgacccaaaggcaagcgggtcgagcacgtctttgtcgacgagtcggccgtcaggccg
ctgtggacgaccgaggacgcgtctgcgcccgcagcgacacatgccctcgctgccaacgac
cagtaccagagcaagagcaggagcgagagcgagagcaaggtctcgtcccagccctcagcc
ggcgaggtggtggcggcgctgcaggccaggctgcgcagcgaccggctgggcacctctcga
ccctttccctttggcggcgtcggcgtgtgggagtggctgagcgccaactcggagcgcctc
tttggcgctgcacgccccggccacgatcctcgggcgggcgcggactcgggctcgaactcg
aactcgatcaccagtggcggtgggggcgaggacaagccgtggcttctgccgctgacgcag
tccgagtgctacgacgtcgacgcgctgacacggcgggtcgacgaggcggcgcggcgcggc
tcgcacgtctacgccaacgcgctggtacccgtcaagctgagcctgacgcgcaagggaacg
gccgaggagctgagcagcgtgcttctcccgccgagctacgacgaccagcagatgtggatg
caacacgtcgacgtcagcaagcaccctctgtcgctgctgtgcaaaaagccgagcggcagc
ggtggtgcggcactgctggatcgggagacggtcaagagggaagtggaacgacggctggaa
cggctgcaactgggtcgatctgcgccgccgctgcctactgcgctgggacacgccaagcgc
accgtcgaggcgcagttgggcgccaccggaacagcggcggcggcggcggcggcaatggtg
gtgccgagcgaggcggagctggatggggtgcacgatcggtgcgccgactggaacgggagc
gtgggcatggtgctgagcggcgactatgcgctgggacgcgggcgcggctttggcatcgcg
gccatgacgctcaaggcgtggatcgaggtggtcaagcgcgaggagcagacgaggacgcga
tgcgatgaggcggcaacacgcgcaggagcaggatcggggggagggaggaagaagaggaac
ccggtcgagtcccgattcctcgtcctggttcgggcggtggggagcgatgtggtgcgaccg
tgtacggccgttccgatccacctctag
DBGET
integrated database retrieval system