Pseudozyma flocculosa: PFL1_05736
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Entry
PFL1_05736 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03018
RNA degradation
pfp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFL1_05736
09123 Folding, sorting and degradation
03018 RNA degradation
PFL1_05736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_05736
03041 Spliceosome [BR:
pfp03041
]
PFL1_05736
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PFL1_05736
mRNA degradation factors
5'-3' decay
Lsm complex
PFL1_05736
Spliceosome [BR:
pfp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PFL1_05736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
COG2_C
Motif
Other DBs
NCBI-GeneID:
19319822
NCBI-ProteinID:
XP_007881462
UniProt:
A0A061H239
LinkDB
All DBs
Position
Unknown
AA seq
149 aa
AA seq
DB search
MLPLTLLNAAQNKPMLVELKNGSTFNGHLIACDNFMNLTLRQVYETSASGEQFWKQPECY
IRGSTIKYCRVADSVIDSVKETEEAARKQRQSGGGGMSGGVNLGMRNQNHGGSGGGGGGR
GGYNNHARGGGAPGGGARGGRGRGRGRGQ
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgctcccactcacgctgctcaatgcggcgcagaacaagccgatgctcgtcgagctcaag
aacggctccaccttcaacggccacctcatcgcctgcgacaactttatgaacctcaccctg
cgccaagtctacgagaccagtgcaagcggagaacagttctggaagcaaccggaatgctac
atccgcggatccaccatcaagtactgccgcgtcgccgattccgtcatcgacagcgtcaag
gagaccgaagaggcggctaggaaacagcgccagtccggcggaggcggcatgtcgggaggc
gtcaacctcggcatgcggaaccagaaccacggcggcagcggcgggggaggaggagggcgg
ggcggatacaacaaccacgcgaggggcggcggcgcacccggaggcggcgcgagaggcggt
cggggcagggggagggggagggggcagtag
DBGET
integrated database retrieval system