Pseudozyma flocculosa: PFL1_05890
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Entry
PFL1_05890 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_05890
04121 Ubiquitin system [BR:
pfp04121
]
PFL1_05890
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
Other 90S particles
PFL1_05890
Ubiquitin system [BR:
pfp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PFL1_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Sof1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
NBCH_WD40
WD_LRWD1
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
eIF2A
MIOS_WD40
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
19319973
NCBI-ProteinID:
XP_007881617
UniProt:
A0A061H2T7
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MKIKALSRSLDAHAPAREGDPAPTSRNLDPALHPFDKPREYTRALNAAKLDRLFAKPFVA
SLDGHIDGIYALAKDYNRLNVLASGSGDGEIRLWDLARQKPIYVYPKAHSGIIQSLCISP
LTFASPTNASALGRRMLSCSTDRTVKLWDADPRPDGIGLSGELGGADDDDDNDDDLDMTA
SGSARRGGLLSTRDKDVPASEPLTVYHGQTAFNSLSHHATSPIFASASSSIQTWDLERGG
SSDPLRSMTWGPDAINVVRFNQSEKEVLASAGTDRSVVLYDLRSGKPLTRMTMGMRANDL
AWSPIEPTVFAVASEDHNIYTFDMRNLRQATQIYKDHVAAVMSVDFSPTGQELVSGSYDR
TLRIWDVGRGNHSRDVYHTKRMQRIFSTSFSMDARFVLTGSDDGNVRIWKARASEKLGIL
STRELASREYAESLRQKWKGVGDVAKIERQRHTPKAIKHAQKLKRTMLDARRVKDEHRRG
HSKMGDKKPKAARKAAVLDVKE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaggcgctctcgaggtcgctcgacgcacacgcaccggcgagggagggagac
ccggcacccacatcgaggaacctcgacccggccctccaccccttcgacaagccaagagag
tacacccgcgccctcaacgctgccaagctcgaccgcctcttcgccaagccgtttgtcgcg
tcgctcgacggccatatcgacgggatctatgcgctggcaaaggactacaacaggctcaac
gtgctagcgagcgggagcggcgatggagagatccgactgtgggatctggcgcggcaaaag
cccatctacgtctacccaaaggcgcactctggcatcatccagtcgctctgcatctcgccc
ctcacgttcgcctcgcccacaaacgcctcggcgctgggtcggcggatgctctcatgctcg
acggaccgcaccgtgaagctgtgggatgctgacccgcggccagacgggatcgggctcagc
ggcgagcttggcggggccgacgacgacgacgacaatgacgacgacctcgacatgacggcg
tccggcagcgcgcgcaggggcggtctgctcagcacgagagacaaggatgtgccggcgagc
gagccactgaccgtctaccacggccagacggcgttcaactcgctctcgcaccacgccacg
tcgcccatttttgcctcggcctcgtcgtcaatccagacgtgggacctcgagcgcggtggc
tcgtcggacccgctgcgctccatgacgtggggacccgacgccatcaacgtggtgcgcttc
aaccagagcgaaaaggaggtgctggcgagcgccggcacggaccgcagcgtggtcctctac
gacctgcgcagcggtaagccgctcaccaggatgacgatggggatgcgcgcaaacgacctc
gcctggtcgcccatcgagcccaccgtctttgccgtggcgagcgaggaccacaacatctac
accttcgacatgcgcaacctgcgccaggcgacgcagatctacaaggaccacgtggcggcc
gtcatgtcggtcgacttttcgccgacgggccaggagctcgtgtcgggctcctacgaccgc
acgctgcgcatctgggacgttgggcggggcaaccactcgcgcgacgtgtaccacaccaag
cggatgcagcgcatcttttcgacgtcgttcagcatggacgcccgcttcgtgctgacgggc
tccgacgacggcaacgtgaggatctggaaggcgcgggcgagcgagaagctgggcatcctc
agcacgcgcgagctggcgagccgcgagtacgccgagagcctgcgccagaagtggaagggc
gtgggagacgtggccaagatcgagcggcagcggcacacgcccaaggccatcaagcacgcc
cagaagctcaagcgtaccatgctcgacgcccgacgcgtcaaggacgagcaccgccgcggc
cactccaagatgggcgacaagaagccaaaggcggccagaaaggcggccgtcctcgacgtc
aaggagtag
DBGET
integrated database retrieval system