KEGG   Pseudozyma flocculosa: PFL1_05890
Entry
PFL1_05890        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
pfp  Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfp03009]
    PFL1_05890
   04121 Ubiquitin system [BR:pfp04121]
    PFL1_05890
Ribosome biogenesis [BR:pfp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    PFL1_05890
Ubiquitin system [BR:pfp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PFL1_05890
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Sof1 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR19_1st WDR90_beta-prop_4th NBCH_WD40 WD_LRWD1 Beta-prop_SCAP Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Vps41 eIF2A MIOS_WD40 Me-amine-dh_H
Other DBs
NCBI-GeneID: 19319973
NCBI-ProteinID: XP_007881617
UniProt: A0A061H2T7
LinkDB
Position
Unknown
AA seq 502 aa
MKIKALSRSLDAHAPAREGDPAPTSRNLDPALHPFDKPREYTRALNAAKLDRLFAKPFVA
SLDGHIDGIYALAKDYNRLNVLASGSGDGEIRLWDLARQKPIYVYPKAHSGIIQSLCISP
LTFASPTNASALGRRMLSCSTDRTVKLWDADPRPDGIGLSGELGGADDDDDNDDDLDMTA
SGSARRGGLLSTRDKDVPASEPLTVYHGQTAFNSLSHHATSPIFASASSSIQTWDLERGG
SSDPLRSMTWGPDAINVVRFNQSEKEVLASAGTDRSVVLYDLRSGKPLTRMTMGMRANDL
AWSPIEPTVFAVASEDHNIYTFDMRNLRQATQIYKDHVAAVMSVDFSPTGQELVSGSYDR
TLRIWDVGRGNHSRDVYHTKRMQRIFSTSFSMDARFVLTGSDDGNVRIWKARASEKLGIL
STRELASREYAESLRQKWKGVGDVAKIERQRHTPKAIKHAQKLKRTMLDARRVKDEHRRG
HSKMGDKKPKAARKAAVLDVKE
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaagatcaaggcgctctcgaggtcgctcgacgcacacgcaccggcgagggagggagac
ccggcacccacatcgaggaacctcgacccggccctccaccccttcgacaagccaagagag
tacacccgcgccctcaacgctgccaagctcgaccgcctcttcgccaagccgtttgtcgcg
tcgctcgacggccatatcgacgggatctatgcgctggcaaaggactacaacaggctcaac
gtgctagcgagcgggagcggcgatggagagatccgactgtgggatctggcgcggcaaaag
cccatctacgtctacccaaaggcgcactctggcatcatccagtcgctctgcatctcgccc
ctcacgttcgcctcgcccacaaacgcctcggcgctgggtcggcggatgctctcatgctcg
acggaccgcaccgtgaagctgtgggatgctgacccgcggccagacgggatcgggctcagc
ggcgagcttggcggggccgacgacgacgacgacaatgacgacgacctcgacatgacggcg
tccggcagcgcgcgcaggggcggtctgctcagcacgagagacaaggatgtgccggcgagc
gagccactgaccgtctaccacggccagacggcgttcaactcgctctcgcaccacgccacg
tcgcccatttttgcctcggcctcgtcgtcaatccagacgtgggacctcgagcgcggtggc
tcgtcggacccgctgcgctccatgacgtggggacccgacgccatcaacgtggtgcgcttc
aaccagagcgaaaaggaggtgctggcgagcgccggcacggaccgcagcgtggtcctctac
gacctgcgcagcggtaagccgctcaccaggatgacgatggggatgcgcgcaaacgacctc
gcctggtcgcccatcgagcccaccgtctttgccgtggcgagcgaggaccacaacatctac
accttcgacatgcgcaacctgcgccaggcgacgcagatctacaaggaccacgtggcggcc
gtcatgtcggtcgacttttcgccgacgggccaggagctcgtgtcgggctcctacgaccgc
acgctgcgcatctgggacgttgggcggggcaaccactcgcgcgacgtgtaccacaccaag
cggatgcagcgcatcttttcgacgtcgttcagcatggacgcccgcttcgtgctgacgggc
tccgacgacggcaacgtgaggatctggaaggcgcgggcgagcgagaagctgggcatcctc
agcacgcgcgagctggcgagccgcgagtacgccgagagcctgcgccagaagtggaagggc
gtgggagacgtggccaagatcgagcggcagcggcacacgcccaaggccatcaagcacgcc
cagaagctcaagcgtaccatgctcgacgcccgacgcgtcaaggacgagcaccgccgcggc
cactccaagatgggcgacaagaagccaaaggcggccagaaaggcggccgtcctcgacgtc
aaggagtag

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