Pseudozyma flocculosa: PFL1_05983
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Entry
PFL1_05983 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_05983
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
Other 90S particles
PFL1_05983
Pre-60S particles
Other pre-60S particles
PFL1_05983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
CMV_UL34
MMS19_C
Motif
Other DBs
NCBI-GeneID:
19320064
NCBI-ProteinID:
XP_007881713
UniProt:
A0A061H397
LinkDB
All DBs
Position
Unknown
AA seq
1510 aa
AA seq
DB search
MATTEASTTAAGVAADVDVDGLHAALSKIRHHTSSKLDNQRAPAQLLVAIESTLTEQDSS
STTDTAAAATAASSSSLQASKHAVTQRQPAEYFLALDSMLESAQSKQAPATLLPCIIYLL
SIVTPYVSAGVVRARLTSIVPPIGAILSKPHPDTHDAATAENYPATLRAALGVLQSILST
FATDPAPLQRDAPLRSCWGAALNLCADTRPKVRRRAQELVCAILPTSSAHFAAAKPKHPL
VAPTFDWCILTLSTVADAGSVVSAKSKKAKKQAAAAATAPQYDKKSGKAKEASAAAALRQ
QRVSEGDNASVGIWTCGFVRQIVNVLPAASVDPLCAVLLRLPGLQNPFLSVAALDVFEAI
FKNCRSPALANPSAALLAGPAAAASASQTNSSIGEKTLVHLIGSLRSSGVKPSTTDVQLI
PSYLRALEQAIVAYSQFDEGRAAWAIVPEVWSDVFAMALSTKSDASRTSPLVRAAGRDAL
CALVRYCVPDAAIAEAIRAHRAGSPDKDADAFLQMIQSIEDALGRQSLQYVQSRPEILSI
LTAVLGRLRHRYMDENEASTGKRQAAAGPLTFHLVKQVADLRAQPNFDHREYADAVISTA
VEVCGPRMVLDALPLNLFGESGDGGNGRAWLLPLMRNKITNAELSHFTQFFVPLSERLFN
KRAEVQQERPVEAKMWEALTEQVWACFPSYCDMPVDLFAAFTRQFAELLTNVLYTQPGLR
PSVCRGLQALVERSEALVHSGADSATLKQAFALDQADGKANVAHLAALAPNLLAVLFNVF
SQSPSSSRGYIYECICTYLSIMKDDDIVSTYTKVKGTLEQSLGSLPPKGKSTKEGSGAIP
PVPHTMLDLLVALVPFLAKANADGAADLFGFACEDRLLRSHDAGVQKKTYKILSRLVEGS
TGRQVLRLGGSGDGSGSAGNRVGELLARLRDSTADVASGAKRDRILLLATLVPNIPADQL
HFLPAIIPEAVLATKESNQATRDHAYELLVQMGHKMAAGGTINRGLVAGTAAAAAAAADD
DEMEDPSAAAAAAGTVVEASVGEYLTMVAAGMAGATPHMISASITAISRLVYEFKEELPA
DMLDEMLSTVEVFLQSANREIVKGALGFVKVAIVDYPSSLLDRHLAALIPALMGWSSEHT
MHFKPKIRHMFERLLRRFGYDRIHDLCPEENRKVIVNIRKRKERAKRQKNQDGEGGGDAA
MSDDDGAAAGPRAPKRSTGNDAFEEVIYGSESELSDDDDDDDVDGEGEGKGKGAAARLQK
GGAGKKGAEVGGGGRKARNRRQHEDQAYIMEDDDEPMDLLDRSAAVRITAGNPNAKADRR
RKPGQDARRFGLDEATGRMVINASDDEGGGAAPSAAQMLAAADGEGDGDVDVVGAGRAYL
EKDRGRDGFTLSRGGAVKFNKNNKRSREQEREMDEAQMAAEDAAEAAARGGGAAKEGSGA
GGDKGNASKKRRREKERIGGEFRARKAEGDVMKNGKSPYAYVPLSQVAGKKSKGKGQEIG
FTTGKRNKRR
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacggaagcaagcaccactgccgcgggcgtcgccgccgacgtcgacgtcgat
ggcttgcacgccgccctctccaagatccggcaccacacctcgtccaagctcgacaaccag
cgcgcccccgcccagctcctcgtcgccatcgagtccaccctcaccgaacaggactcttcg
tccaccacggataccgcggcggcagcgacagcggcatcctcgagcagcctccaggctagc
aagcacgccgtcacccagcgccaacccgccgagtactttctcgcactcgatagcatgctc
gagtccgctcagagcaaacaggcccccgcgacgctgctgccctgcatcatctacctcctc
tccatcgtgacgccctacgtcagcgcaggcgtcgtacgcgcccgtctcacctccatcgtg
ccccccatcggcgccatcctctccaagccccaccccgatacccacgatgctgccaccgcc
gaaaactacccggccaccctgcgcgccgcactgggcgtgctccagtcgatcctctccacc
ttcgcgaccgacccggcaccgctccagcgcgatgctccccttcgctcctgctggggtgcc
gcactcaacctctgcgccgacacgcggcccaaggtccgtcgccgcgcacaggagctcgtc
tgcgccatcctgcccacgtcgtcggcccactttgccgccgccaagccaaagcacccgctc
gtcgcccccacctttgactggtgcatcctcaccctctccaccgtcgccgacgccggctcc
gtcgtctctgccaagtccaaaaaggccaaaaagcaggcagcagcagcagccacggcaccc
cagtacgacaagaagtcgggcaaggccaaagaggcctcggccgcagcggcgctccggcag
cagcgcgtgtccgagggcgacaatgctagcgtcggcatctggacctgcggcttcgtacgc
cagattgtcaacgtcctccccgccgcctcggtcgacccgctctgcgccgtcctgctccgc
cttccggggcttcagaatcccttcctcagcgtcgctgcactcgatgtctttgaggctatc
ttcaaaaactgtcgctcgccggcgctcgccaacccatcagctgcactcctggccgggccg
gcggcagcggcgtcggcatcgcagaccaattcttcgattggagaaaagacgctcgtccac
ctgatcggctcgctgcggtcgtccggcgtcaagccctccacgaccgacgtccagctcatc
ccgtcgtacctccgcgccctcgagcaggccattgtggcctactcgcagtttgacgaggga
cgggcagcttgggccatcgtacccgaggtctggagcgacgtttttgccatggcgctctcg
accaagtcggatgccagccgcacgtcgccgctggtgcgcgccgccggacgcgatgcgctc
tgtgccctggtgcgctactgtgtgccggacgccgccatcgccgaggccatccgtgcccac
cgcgctggctcgcccgacaaggacgccgacgccttcctgcagatgatccagtcgatcgag
gacgcgctgggtcgccagtcgctccagtacgtccagtcgcggcccgagatcctcagcatc
ctcaccgccgttctcggccgcctgcgccaccgctacatggacgagaacgaggccagcacc
gggaagcgccaggccgcggcgggcccgctcaccttccacctggtcaagcaggtggccgac
ctccgtgcgcagcccaacttcgaccaccgcgagtacgccgacgccgtcatcagcaccgcc
gtcgaggtgtgcgggccgcgcatggtgctcgacgcgctgccgctcaacctctttggcgag
agcggcgacggcggcaacggccgcgcgtggctgctgccgctgatgcgcaacaagatcacc
aacgccgagctgtcgcactttacccagttctttgtgcccctcagcgagcgcctcttcaac
aagcgcgccgaggtgcagcaggagcgccccgtcgaggccaagatgtgggaggcgctcacc
gagcaggtgtgggcgtgtttcccctcgtactgcgacatgcccgttgacctgttcgcagcc
ttcacgcgtcagtttgccgagctcctcaccaacgtcctgtacacgcagcctggtctgcgg
ccgagcgtctgccgcggcctccaggcgctcgtggagcgcagcgaggcgctggtccactcg
ggcgccgactcggccacgctcaagcaggcctttgcgctcgaccaggccgacggcaaggcc
aacgtggcccacctggccgcgctggcgcccaacctgctcgccgtcctcttcaacgtcttc
tcgcaatcgcccagctcgtcgcgcggctacatctacgagtgcatctgcacctacctctcg
atcatgaaggacgacgacatcgtcagcacctacaccaaggtcaagggcacgctcgagcag
tcgctgggctcgctgccgcccaagggcaagtcgaccaaggagggctcgggcgccatcccg
cccgtcccgcacacgatgctcgacctgctcgtggccctggtgcccttcctcgccaaggcc
aacgccgacggtgcggcggacctcttcggcttcgcgtgcgaggaccgcctgctccgcagc
cacgacgccggcgtgcagaagaagacgtacaagatcctcagccgcctggtcgagggctcg
acgggccgccaggtgcttcgcctcggcggcagcggcgacggaagcggctccgccggcaac
cgcgtcggcgagctcctggcgcgcctccgcgacagcaccgccgacgtggcctcgggcgcc
aagcgcgaccgcatcctgctgcttgccacgctcgtgcccaacatccccgccgaccagctc
cacttcctgcccgcgatcatccccgaggccgtgctggccaccaaggagtcgaaccaggcc
acgcgcgaccatgcctacgagcttctggtccagatgggccacaagatggccgctggcgga
accatcaaccgcggcctcgttgccggcaccgccgcggccgccgctgctgctgccgacgac
gacgagatggaggacccgtcggccgccgcggctgccgccggcaccgtcgtcgaggcgagc
gtcggcgagtacctgaccatggtggctgcgggcatggccggcgcgacgccgcacatgatc
agcgcgtcgatcacggccatctcgcgccttgtgtacgagttcaaggaggagctgccggcc
gacatgctcgacgagatgctgtcgacggtcgaggtgttcctgcagagcgccaaccgcgag
attgtcaagggcgcgctgggctttgtcaaggtggccatcgtcgactacccgtcgtcgctg
ctcgaccggcacctggccgcgctgatcccggcgctcatgggctggagctcagagcacacg
atgcacttcaagcccaagatccgccacatgtttgagcgcctgctgcgccgcttcggctac
gaccgcatccacgatctgtgccccgaggagaaccgcaaggtgattgtcaacatccgcaag
cgcaaggagcgcgccaagcgccagaagaaccaggacggcgaaggcggcggcgacgctgcc
atgtccgacgacgacggcgccgccgccggcccgcgtgcacccaagcgctcgacgggcaac
gatgcgttcgaggaggtcatctatggcagcgagagcgagctctccgacgacgacgatgac
gacgacgtcgatggcgagggcgagggcaagggcaagggcgccgcggccaggctgcaaaag
ggcggcgctggcaagaagggcgccgaggtcggcggcggcggccgcaaggcgaggaaccga
cggcagcacgaggaccaggcgtacatcatggaggacgacgacgagcccatggacctgctg
gaccgctcggcggcggtgcgcatcacggcgggcaaccccaacgccaaggcggaccgacgc
cgcaagccgggccaggacgcgcggcggttcggcctcgacgaggcgactggccgcatggtc
atcaacgcgtccgacgacgagggcggcggcgctgccccctcggccgctcagatgctcgcc
gctgccgacggcgagggcgacggcgacgtcgacgtggtgggtgccggacgcgcctacctg
gaaaaggaccgcgggcgcgacggcttcacgctctcgcgcggcggggcggtcaagtttaac
aagaacaacaagcgttcgcgcgagcaggagcgcgagatggacgaggcgcagatggccgcc
gaggatgctgccgaagccgctgcgcgcggtggcggcgcagcaaaggagggcagcggcgcg
ggcggcgacaagggcaatgcgagcaagaagcggaggagggaaaaggagcgcatcggcggc
gagttccgcgcgcgcaaggccgagggcgacgtcatgaagaacggaaagagcccctacgcc
tacgtgcccctgtcgcaggtggccggcaaaaagtccaagggcaaggggcaggagattggc
ttcaccactggtaagcgcaacaagcgcaggtga
DBGET
integrated database retrieval system