Pseudozyma flocculosa: PFL1_06152
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Entry
PFL1_06152 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFL1_06152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_06152
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_06152
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
PFL1_06152
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
PFL1_06152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
19320232
NCBI-ProteinID:
XP_007881883
UniProt:
A0A061H138
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MPSSPFYLDNRPSPANWAAGNDASPRQRPSPSTSSSLANGKQRRGRRGGSGHSTPYQSRS
AAHSDDDGNDNDNDYDNDHDLDMETSFVFDVQGDADLHEDHEQHRQQPQHPSTSSSSRNA
SDPHETDKAAATANDSLVLPDHVQIIPDLPQGLREEQRQRDEAEDDMGDYQQLDLDPATA
GRYYAAEEIEEKRKLAKCPACGEDGHERKRCPHLLCMACGALDSHSTRECPLSTCCFRCG
GQGHRSHDCPQPRSYGGGRGASRECVKCGSYRHTLATCPTHWRVYVFNDRDTYETERSRK
AYKQQHGHRSATIASRDAHEPDEVSDDDDIDDDMQRDEGEELEEGEVGASDWDPATRWCY
NCTSTSHWGDDCPTRRVNPTRTNGEPSAFSEFVSRWGPYGSLIPPPPPVHSGSGGSALDR
APSTYAFTFRSGVGGSSGAGGRFGGGEDETTFHFSAAPPPSSRGRRDPHEELTRKQRKKL
GGGGGGGGGGGGSLLDRFSNAPMTPGGDRSRYKKKGSSTKKDKKASGSGSSGSGGSGSKA
KSKKRKSEPESGEAKKARKAAKKEAKKEKKESSGGSASGSGKTRSSDKESNKKKSKKGAS
SGGGGGGGGGSTSEKKARTKVENKSMYRGGYD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtcgcccttctacctcgacaaccgcccctcgcccgcaaactgggcggcaggc
aacgacgcatcacccagacaacgcccctcgccgtcgacgtcgtcgtccctggccaatggc
aagcaaagacgcggcaggcgcggcggctcaggccactccaccccttaccagtcacgcagc
gccgcccacagcgacgacgacggcaacgacaatgacaacgactacgacaacgaccacgac
ctcgacatggaaacaagcttcgtctttgacgtgcagggcgacgcagacctccacgaggac
cacgagcagcatcgccagcagccgcagcacccctcgacctcgtcgtcctctcgcaacgca
tccgacccacacgaaaccgacaaggcagcggcgacggccaacgacagcctcgtgctgccc
gaccacgtccagatcattccagacctcccacagggcctgcgcgaagagcagcgccagagg
gacgaggccgaggacgacatgggcgactaccagcagctcgacctcgacccagccaccgcg
ggacggtactacgccgcagaggaaatcgaggagaagcgcaagctcgcaaagtgtcccgcc
tgcggcgaagacggtcacgagcgcaagagatgcccgcatctcctatgcatggcgtgcggc
gcgctcgactcgcactcgacgcgcgagtgcccgctgagtacttgctgcttccgctgcggc
ggccaggggcatcgcagccacgactgcccccagccccgctcctacggcggtgggcgcggt
gcgtcgcgcgaatgcgtcaagtgcggcagctaccgccacacgctcgccacctgccctacc
cactggcgcgtctacgtcttcaacgatcgcgacacgtacgagaccgagcgcagccgcaag
gcgtacaagcagcagcacggccaccgcagtgcaacgatagcctccagggacgcccacgag
cccgacgaggtcagcgacgacgacgacatcgacgacgacatgcagcgcgacgaaggggaa
gagctggaagagggagaggtgggcgcgagcgactgggacccggcaacgcgctggtgctac
aactgcacctcgaccagccactggggcgacgactgcccgacgcggagggtcaacccgaca
cgcaccaacggcgagccctcggcgttttccgagtttgtctcgcgctggggaccgtacggc
agcctcataccgccgccgccccccgtgcacagcggcagcggcggctcggcgctggatcgc
gcgccgtcgacatatgcctttacctttcgctcgggcgtcggcggctcgtcgggcgcgggt
ggcaggttcggcggcggcgaggatgagacgacttttcatttctcggctgcacctccgccg
tcgtcgcgcggacgtcgcgacccgcacgaagagcttactagaaagcagaggaaaaagctc
ggcggcggcggcggcggtggcggtggaggcggtggctcgctgctggaccgcttcagcaac
gcgcccatgacgcccggcggcgaccgcagccggtacaagaagaagggctcgtcgacgaag
aaggacaagaaggcgagcgggagcggcagcagcgggagcggcggcagcggcagcaaggcc
aagtcgaagaagagaaagtcggaaccggaaagcggcgaggccaagaaggccaggaaggcg
gctaaaaaggaggccaagaaggagaagaaggagagcagtggcggcagcgccagtggcagc
ggaaagacgagatcgagcgacaaggagtcgaacaagaaaaagtccaagaagggcgccagc
agcggcggcggtggcggcggcggcggcgggtcgacgtcggaaaagaaggcgaggaccaag
gtggagaacaagtccatgtaccgcggcggctacgactga
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