KEGG   Pseudozyma flocculosa: PFL1_06152
Entry
PFL1_06152        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K12597  protein AIR1/2
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFL1_06152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfp03019]
    PFL1_06152
   03016 Transfer RNA biogenesis [BR:pfp03016]
    PFL1_06152
Messenger RNA biogenesis [BR:pfp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     PFL1_06152
Transfer RNA biogenesis [BR:pfp03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    PFL1_06152
SSDB
Motif
Pfam: zf-CCHC AIR2-like_ZnK4
Other DBs
NCBI-GeneID: 19320232
NCBI-ProteinID: XP_007881883
UniProt: A0A061H138
LinkDB
Position
Unknown
AA seq 632 aa
MPSSPFYLDNRPSPANWAAGNDASPRQRPSPSTSSSLANGKQRRGRRGGSGHSTPYQSRS
AAHSDDDGNDNDNDYDNDHDLDMETSFVFDVQGDADLHEDHEQHRQQPQHPSTSSSSRNA
SDPHETDKAAATANDSLVLPDHVQIIPDLPQGLREEQRQRDEAEDDMGDYQQLDLDPATA
GRYYAAEEIEEKRKLAKCPACGEDGHERKRCPHLLCMACGALDSHSTRECPLSTCCFRCG
GQGHRSHDCPQPRSYGGGRGASRECVKCGSYRHTLATCPTHWRVYVFNDRDTYETERSRK
AYKQQHGHRSATIASRDAHEPDEVSDDDDIDDDMQRDEGEELEEGEVGASDWDPATRWCY
NCTSTSHWGDDCPTRRVNPTRTNGEPSAFSEFVSRWGPYGSLIPPPPPVHSGSGGSALDR
APSTYAFTFRSGVGGSSGAGGRFGGGEDETTFHFSAAPPPSSRGRRDPHEELTRKQRKKL
GGGGGGGGGGGGSLLDRFSNAPMTPGGDRSRYKKKGSSTKKDKKASGSGSSGSGGSGSKA
KSKKRKSEPESGEAKKARKAAKKEAKKEKKESSGGSASGSGKTRSSDKESNKKKSKKGAS
SGGGGGGGGGSTSEKKARTKVENKSMYRGGYD
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgccttcgtcgcccttctacctcgacaaccgcccctcgcccgcaaactgggcggcaggc
aacgacgcatcacccagacaacgcccctcgccgtcgacgtcgtcgtccctggccaatggc
aagcaaagacgcggcaggcgcggcggctcaggccactccaccccttaccagtcacgcagc
gccgcccacagcgacgacgacggcaacgacaatgacaacgactacgacaacgaccacgac
ctcgacatggaaacaagcttcgtctttgacgtgcagggcgacgcagacctccacgaggac
cacgagcagcatcgccagcagccgcagcacccctcgacctcgtcgtcctctcgcaacgca
tccgacccacacgaaaccgacaaggcagcggcgacggccaacgacagcctcgtgctgccc
gaccacgtccagatcattccagacctcccacagggcctgcgcgaagagcagcgccagagg
gacgaggccgaggacgacatgggcgactaccagcagctcgacctcgacccagccaccgcg
ggacggtactacgccgcagaggaaatcgaggagaagcgcaagctcgcaaagtgtcccgcc
tgcggcgaagacggtcacgagcgcaagagatgcccgcatctcctatgcatggcgtgcggc
gcgctcgactcgcactcgacgcgcgagtgcccgctgagtacttgctgcttccgctgcggc
ggccaggggcatcgcagccacgactgcccccagccccgctcctacggcggtgggcgcggt
gcgtcgcgcgaatgcgtcaagtgcggcagctaccgccacacgctcgccacctgccctacc
cactggcgcgtctacgtcttcaacgatcgcgacacgtacgagaccgagcgcagccgcaag
gcgtacaagcagcagcacggccaccgcagtgcaacgatagcctccagggacgcccacgag
cccgacgaggtcagcgacgacgacgacatcgacgacgacatgcagcgcgacgaaggggaa
gagctggaagagggagaggtgggcgcgagcgactgggacccggcaacgcgctggtgctac
aactgcacctcgaccagccactggggcgacgactgcccgacgcggagggtcaacccgaca
cgcaccaacggcgagccctcggcgttttccgagtttgtctcgcgctggggaccgtacggc
agcctcataccgccgccgccccccgtgcacagcggcagcggcggctcggcgctggatcgc
gcgccgtcgacatatgcctttacctttcgctcgggcgtcggcggctcgtcgggcgcgggt
ggcaggttcggcggcggcgaggatgagacgacttttcatttctcggctgcacctccgccg
tcgtcgcgcggacgtcgcgacccgcacgaagagcttactagaaagcagaggaaaaagctc
ggcggcggcggcggcggtggcggtggaggcggtggctcgctgctggaccgcttcagcaac
gcgcccatgacgcccggcggcgaccgcagccggtacaagaagaagggctcgtcgacgaag
aaggacaagaaggcgagcgggagcggcagcagcgggagcggcggcagcggcagcaaggcc
aagtcgaagaagagaaagtcggaaccggaaagcggcgaggccaagaaggccaggaaggcg
gctaaaaaggaggccaagaaggagaagaaggagagcagtggcggcagcgccagtggcagc
ggaaagacgagatcgagcgacaaggagtcgaacaagaaaaagtccaagaagggcgccagc
agcggcggcggtggcggcggcggcggcgggtcgacgtcggaaaagaaggcgaggaccaag
gtggagaacaagtccatgtaccgcggcggctacgactga

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