KEGG   Pseudozyma flocculosa: PFL1_06400
Entry
PFL1_06400        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03020  RNA polymerase
pfp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFL1_06400
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFL1_06400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_06400
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_06400
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PFL1_06400
  RNA polymerase III system
   RNA polymerase III
     PFL1_06400
  RNA polymerase I system
   RNA polymerase I
     PFL1_06400
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFL1_06400
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 19320478
NCBI-ProteinID: XP_007882134
UniProt: A0A061H2D0
LinkDB
Position
Unknown
AA seq 208 aa
MDDDRETARLWRVNKTIHELVRDRGYQVADEEYNIDLETFKAEYAPNGGSVDRNRLNFFT
EHSHLENERLFVFYSTERNVGVKTMRQFIGIMEEKDINRGIIIWSDKMTSSAKKVIDAMK
DTFQLEDFDEAYLLVNITHHYLVPKHEVLTTDEKKALLARYRLKDSQLPRIQQADPVAKY
FGLERGQVVKITRPSETSGRYCSYRICL
NT seq 627 nt   +upstreamnt  +downstreamnt
atggacgacgacagagagacggccaggctgtggcgtgtcaacaagaccatccacgagctc
gtcagagataggggctaccaagtggcggacgaggagtacaacatcgacctcgagacgttc
aaggccgagtacgcgcccaatggcggctccgtggaccgcaaccgcctcaactttttcacc
gagcactcgcacctcgaaaacgagcgcctcttcgtcttctactcgaccgagcgcaacgtc
ggcgtaaagacgatgcgccagtttatcggcatcatggaggaaaaggacatcaaccgcggc
atcatcatctggagcgacaagatgacgagctcggccaaaaaggtcattgacgccatgaag
gacacgttccagctcgaggactttgacgaggcctacctcctcgtcaacatcacccaccac
tacctcgtcccgaaacacgaggtgctcaccaccgacgagaaaaaggcgctgctggcgagg
taccgactcaaggactcgcagctgccgaggattcagcaggccgatcccgtggcaaagtac
tttggcctcgagagagggcaggtagtcaagatcactcggccttccgagacgtcgggacga
tactgctcctaccgcatctgtctatga

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