Pseudozyma flocculosa: PFL1_06427
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Entry
PFL1_06427 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFL1_06427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_06427
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFL1_06427
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Scaffold
Motif
Other DBs
NCBI-GeneID:
19320503
NCBI-ProteinID:
XP_007882159
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MNDYLMDVQPRSLSELAQQSNKLTNHLGRSDVPQIQLPIDQVADQTRKLAAGHLRAGSAQ
PSDARAHYFLANGGIDAAELAETINAANIANTFEPLQPVYDTDVESYLKHEHEQVILGAI
EEGRRETLNDFHRNLDRTMHRDWERQKRKILEELGQHQPSSAADRAGDFDLARSRSGFGA
STSAYTLSQSTGPGATFGASLGAGGGGASMSQMHGKMVRYEMVVSRLNSSRLEGYNLAVA
HAFMDAVRGLAEDPKQKQLHDCWQAIAHIVREQDVRDGEFTTKAIQERQYASAYVDPANW
NGVEGVSLRRNIVDGAKAYLEEQFLAHMEQTIAARPVQAQRGGVPTNRSTVGAYLRVQHL
TSAGQWRNDLAKELDQQTGTPLWATIYHLLRVGKTSEALDCAADNENRIRATDPSFLAYF
KAWADSPERRLPRLLRDRFVAEYNSRFRSIPEGHDPYKLSLYKLIGRIDVAKKFPTLLAS
STENWLWLQLSMVREALDDESDAQDSVRDRYTLADLGAKLEKYGEAHFDPKGNRPLHYFQ
ILLLCGQFEKAVAFLFSRSVHQVDAVHFAVGLAYYGLLRVPSAAASSQVDCLSIEQDAAT
GQPIAYLDFAKLVQRYVRLFAQSSRRDALQYLYLICLNADAPEPVGSEQVQRCHDLIRGL
VLDAHPTEFQELLGDLRTNGVKTPGFIERNLPLIRIKDEREFLSTIVKVAATQCELAHRT
ESAILLYNLAGERDTVVAVLNKELGARLTEPSSSSEWQSGGLTSGASFSAAGNLVTLASA
ILETYEKQFGYTGRNRDTCRCLLELKKGFGLYSDEHFVQALQTIEALRLLPIDAESRKDI
VAITRKAEEFKEVDENVARNLDAIAIMTMQTLYELHKALKESVHRSGTAAMEQYRAQARA
LMMWAGMLRFRMSSETYSQLTRLDVFIH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactacctcatggacgtgcagccgcgatcgctctcggagctggcacagcagtcc
aacaaactcacaaaccacctcggccgctcagacgtcccacagatccagctccccatcgac
caggtcgcagatcagacccggaaactcgcagccggccacctccgcgctggctcagcgcag
ccctcggatgccagagcccactacttcctcgcaaacggtggcatcgacgccgcagagctc
gcagagacgatcaacgcggccaacatcgccaacacctttgagcccctgcagccagtctac
gacaccgatgtcgagagctacctcaagcacgagcacgagcaggtcatcctcggagccatc
gaagaggggcggcgcgagacgctcaacgacttccaccgcaacctggaccgcaccatgcac
cgcgactgggaacgccagaagcgcaagatcctcgaggagctcggccagcaccagcccagc
tccgccgccgaccgcgctggcgatttcgacctcgcccgctcccgctccggcttcggcgca
tccacctccgcatataccctctcgcagtcgaccggcccgggtgcgacgttcggcgcgagc
ctcggcgctggcggcggcggggcatccatgtcgcagatgcacggcaagatggtgcggtac
gagatggtcgtctcccgcctcaactcgtcccggctcgagggctacaacctcgccgtggcc
cacgccttcatggatgccgtccgcgggctggccgaggaccccaagcagaagcagctccac
gactgctggcaggccattgcccacattgtgcgcgagcaggatgtccgggatggcgagttc
accaccaaggccatccaggagaggcagtacgcctcggcctacgtcgacccggccaactgg
aacggcgtcgagggcgtgtcgcttcgcaggaacatcgtcgacggcgccaaggcgtacctc
gaggagcagttcctcgcgcacatggagcagaccatcgccgcccgcccggtgcaggcgcag
cgcggaggcgtgccgaccaaccgatcgacggtgggcgcctacctccgcgtgcagcacctc
acctccgccggccagtggcgcaacgacctggccaaggagctcgaccagcagacgggcacg
ccgctctgggccaccatctatcacctgctgcgcgtcggcaagacgtccgaggcgctcgac
tgcgccgccgacaacgagaaccgcatccgtgccaccgacccgtcattcctagcctacttc
aaggcgtgggccgacagcccggagcgccggctgccgcggctgctgcgggaccgcttcgtg
gccgagtacaactcgcgcttccgcagcatccccgagggccacgacccctacaagctgtcg
ctctacaagctcatcggccgcatcgacgtggccaaaaagttcccgacgctgctggcctcg
agcaccgagaactggctctggctccagctgagcatggtgcgcgaggcgctcgacgacgag
tccgacgcccaagactcggtccgcgaccgctacacgctggccgacctgggcgccaagctg
gaaaagtacggcgaggcgcactttgaccccaagggcaaccgcccgctccactacttccaa
atcctgctgctctgcgggcaatttgagaaggcggtcgccttcctgttctcgcgctcggtc
caccaggtcgacgcggtccactttgccgtcggcctggcctactacggcctgctgcgcgtg
ccctcggcggccgcctcgtcgcaggtcgactgcctgtcgatcgaacaggacgcggcgacg
ggccagccgatcgcctacctcgactttgccaagctggtgcagcgctacgtccgcctgttt
gcgcagtcgtcgcgccgcgacgcgctgcagtacctctacctcatctgcctcaacgccgat
gcgccggagcccgtgggctcggagcaggtgcagcggtgccacgacctgatccgcgggctg
gtgctcgacgcccacccgaccgagttccaggagttgctgggcgacctgcgcaccaacggc
gtcaagacgcccggttttattgagcgcaacctgccgctgatccggatcaaggacgagcgc
gagtttctgtcgacgattgtcaaggtggcggcgacgcagtgcgagctggcgcaccgcacc
gagtcggccatcctgctctacaacctggcgggcgagcgggacacggtggtggcggtgctc
aacaaggagctgggcgcgcggctgacggagccgtcgagctcgtccgagtggcagtcgggc
ggcctgacgtcgggcgcgtcgttttcggcggcgggcaacctggtgacgctggcgtcggcc
atcctcgaaacctacgagaagcagtttggctacacgggccgcaaccgcgacacgtgccgg
tgcctgctggagctgaaaaagggctttggcctgtacagcgacgagcactttgtgcaggcg
ctgcagacgattgaggcgctgcggctgcttccgatcgacgccgagtcgcgcaaggacatt
gtggccatcacgcgcaaggccgaggagttcaaggaggtcgacgaaaacgtggcgcgcaac
ctcgacgccattgccattatgacgatgcagaccctgtacgagctgcacaaggcgctcaag
gagtcggtccaccgcagcggcacggcggccatggagcagtacagagcgcaggcgagggcg
ctgatgatgtgggcgggcatgctgcgcttccggatgagcagcgagacctacagccagctg
accaggctagacgtctttatccactaa
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