Pseudozyma flocculosa: PFL1_06441
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Entry
PFL1_06441 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PFL1_06441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_06441
03036 Chromosome and associated proteins [BR:
pfp03036
]
PFL1_06441
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PFL1_06441
Chromosome and associated proteins [BR:
pfp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PFL1_06441
PBAF complex
PFL1_06441
GBAF(ncBAF) complex
PFL1_06441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
19320517
NCBI-ProteinID:
XP_007882173
UniProt:
A0A061H5X6
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MATLNVTGLPDPKLVSDKPTLEALRAYVEPITTALTGVTVPTRSGTGSLTATDLAHLSHD
LQKFQEEVLGASVPRPADPSGSSPVTRHPPRIPAMLFVPTASLQNTAALPADQSPARFIL
EESLRFLASKGRTTWNFGDLALKHENVHLVIAVREALKSKGLLKRARITANASITEAELE
SLQAMASQLDCEWTSDPSAATHILFASEATPPSSPRAEGAPPVEEYFRTLARRGGRALVH
VWYRPDSYDTWLPAADFADPDPEPEARTTAWKVGTKWLKDSVRFNELMNEEDYEEEEEEQ
ATAPTADADAVTQGATAEPSADVASKGKKRSLPDEVTDEPVAGSTESGGKRIKLLVPAKP
IGAIPIDLSGSQPIPGKKYENEPVPGGVLGNLPAETAGPTRTEGEQPSVRAANDSDVTMA
EAADKDKPDGEEEVQEDGATHPDTAALEEQRNRAEAIARKYLAAQTQEVIIPSYSTWFDM
STINAIEKRSLPEFFNNKNRSKTPSIYKDYRDFMINTYRLNPSEYLTFTACRRNLAGDVC
AIMRVHAFLEQWGLINYQIDPETRPATLGPPFTGHFRVLVDTPRGLQPLHPGTRLPIAPQ
AADRANGAAVAGADGTAAAAAAGGKPDMNLELRKTIYQSTLKGSKPIDLAEADSLVAQAD
AAVKAGAGAGPRYSCDTCGTDCTRVRYHSIKAKDFALCSSCYLEGRFPSSMYSGDFVRME
DTVYKHAGGPAGGASGAQDDWTDAETLLLLEGLEMFDDDWSAVAAHVGTRSREQCITKFI
QLPIEDGYLEGASQADMGPLQYALRDPSNDKNAGAKSILPFAQADNPVMSVVAFLASAVN
PAIAAAAAQSALGELTEGLRRRAQKEGGAAASGEKESGADAADSGDKDKNKPSEAGDAMD
VDGDKDKEAQPTGDKDKDKDDEAGREQSVVAGEADKDSGDKAAPAADGGSKGPIPRNAVE
RAAAMALGAAAAKAHVLASFEERECQRLVGQVIEAQMRKLELKLSQFHEFESLLESERRS
IEAGRRQLYADRLAVQRQMALVNQLLEKAHREPENVRPEEVVHASSAANGLPQQGPVVRE
AVVPNGPPAAPPGGIARIG
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctcaacgtcacgggcctgcccgacccaaagcttgtctcggacaagcccacg
ctcgaggcactcagggcctacgtcgaacccatcaccaccgccctcaccggcgtcacggtc
ccaaccagatccggcaccggctccctcaccgccacagacctcgcccacctctcccatgac
ctccagaagttccaggaagaggtcctcggcgcctcggtaccccgacccgccgaccccagc
ggcagctcgcccgtcacacgtcaccctccgcgcatccccgccatgctcttcgtccccacc
gcatcgctccagaacacggctgctctgcccgccgatcagagccccgctcgcttcatcctc
gaagagtcgctccgattcctcgcgtccaagggtaggaccacctggaactttggcgaccta
gcgctcaagcacgagaacgtccacctcgtcatcgctgttcgagaggcgctcaagagcaag
ggtctgctcaagagggccaggatcacggccaacgcgtccatcaccgaggccgagctcgaa
tcgctgcaggccatggcttcacagctcgactgtgaatggacctcggacccctcggccgcc
acgcacatcctgttcgcttcggaggccacgccgccgtcgtcgccgcgagcagagggcgca
ccgcctgtcgaggagtacttcaggacgctggccaggcgaggaggccgcgctctcgtccat
gtctggtaccggcccgactcgtacgacacatggctgcctgccgccgactttgccgacccg
gacccggagccagaagcccgcacaacggcctggaaggtcggcaccaagtggctcaaggac
agcgtccgcttcaacgagctgatgaacgaggaagactacgaagaggaggaggaggagcag
gcaacggcacccacagcggacgcggatgccgtcacccagggtgccacggccgagccgtcg
gcagacgtggcgtccaagggcaagaagcgaagcctacccgacgaggtcaccgacgagccg
gtcgctggctcgactgaatccggcggcaagcgcatcaagctgctcgtaccggccaagccg
atcggcgcgatcccgatcgatctctctggttcgcagcccatcccgggcaagaagtatgag
aacgagcccgtgcccggcggtgtgctcggcaacctcccagccgagacggccggacccacg
aggaccgaaggcgagcagccgtccgtacgcgccgccaacgactcggacgtcacgatggcc
gaggcggccgacaaggacaagcctgacggcgaggaagaggtgcaggaggacggcgcgacc
cacccagacactgcggcgctcgaggagcagaggaaccgggccgaggcgatagcgcgaaag
tacctggccgcccagacgcaggaggtcattatcccctcgtactcgacctggttcgacatg
tcgacgatcaacgccattgagaagcgctcgctgcccgagttttttaacaacaagaatcgc
agcaagacgcccagcatctacaaggactaccgcgactttatgatcaacacctaccgcctc
aacccgagcgagtacctcacgttcaccgcctgccgcaggaacctggccggcgatgtatgc
gccatcatgcgcgtccacgcgttcctggagcagtgggggctcatcaactaccagatcgac
cccgagacgaggcccgccaccctcggaccccccttcaccggccacttccgcgtgctcgtc
gacacccctcgcggtcttcagccccttcacccaggcacccgcctccccattgcccctcag
gccgccgaccgcgctaacggagcagccgttgcgggcgctgatggcactgccgccgccgcc
gccgcaggtggcaagcccgacatgaacctagagcttcgcaagaccatataccagtcgacg
ctcaagggctccaagccgatcgatctggccgaggccgattcgctcgtggctcaggcggac
gccgccgtcaaggccggagctggagctggcccgcgctacagctgcgacacatgcggcacc
gactgcacgcgcgtccgctaccacagcatcaaggccaaggacttcgcgctgtgctcgtcg
tgctacctagagggccgcttcccgagctcgatgtactcgggcgacttcgtgaggatggaa
gacaccgtctacaagcatgccggcggacccgcgggcggcgcctcgggggcccaggacgac
tggaccgatgccgagacgctgttgctgctcgaggggctcgagatgtttgacgacgactgg
tccgccgtcgccgcccacgtcggtactcgctcgagggagcagtgcatcaccaagtttatt
cagctgcccatcgaggacggctacctcgagggtgcgagccaggcggacatgggaccgctg
cagtacgcgctgcgcgacccgagcaacgacaagaacgccggcgccaagtcgatcctgccg
tttgcccaggccgacaacccggtgatgagcgtcgtcgccttcctcgccagcgccgtcaac
ccggccatcgcggctgccgcggcgcagagtgcgctgggcgagctgactgaagggctgagg
cggcgcgcgcagaaggagggcggtgccgctgcttcgggcgaaaaagagtcaggtgccgat
gccgccgactctggcgacaaggacaagaacaagccgagcgaggcgggcgacgccatggac
gtcgacggcgacaaggataaggaggcgcagccgacgggggacaaggacaaggacaaggat
gatgaggctggacgcgaacagagcgtcgtcgccggcgaggcagacaaggacagcggcgac
aaggcggctcctgcagccgacggcggcagcaagggaccgattccgcgcaacgccgtcgag
cgggcggctgccatggcgctgggcgccgccgctgccaaggcgcacgtgctggccagcttc
gaggagcgcgagtgccagcgcctggtgggacaggtgattgaggcgcagatgaggaagctc
gagctcaagctgtcgcagttccacgaatttgaatcgctgctcgagtcggagcggcggagc
atcgaggcggggcggaggcagctctacgccgaccggctggcggtgcagcggcagatggcg
ctcgtcaaccagctgctggaaaaggcgcaccgcgagccggaaaacgtgcgtcccgaagag
gtggtccacgcctcgtcggccgccaacggcctgccgcagcagggtcccgtcgtgcgcgag
gccgtcgtccccaacggtccgcccgccgccccgcccggtggcatcgccaggatcggatag
DBGET
integrated database retrieval system