Pseudozyma flocculosa: PFL1_06445 Help Entry PFL1_06445        CDS       T03141                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism pfp  Pseudozyma flocculosa Pathway pfp03020   RNA polymerase pfp03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pfp00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PFL1_06445   09124 Replication and repair    03420 Nucleotide excision repair     PFL1_06445  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pfp03021]     PFL1_06445    03400 DNA repair and recombination proteins [BR:pfp03400]     PFL1_06445 Enzymes [BR:pfp01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PFL1_06445 Transcription machinery [BR:pfp03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PFL1_06445 DNA repair and recombination proteins [BR:pfp03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PFL1_06445 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R ABC1 Motif Other DBs NCBI-GeneID:  19320521 NCBI-ProteinID:  XP_007882177 UniProt:  A0A061H2H9 LinkDB All DBs Position Unknown AA seq 1779 aa AA seqDB search MSAAAGQSFAHSTAPTRAVREVQFGILSPEEIRAISVCKIEVPEVKDEAGKPRIGGLSDP RLGTLDRNYKCQTCGEGQAECPGHFGHIDLAKPVFHIGYLGKVKKILECVCTHCGRLKSD PVTDPAFAAILRATERNRKRRFQRVWEYCSKKMICEADDPKDEDEMGFEEQPKLGHGGCG RSQPAIRREGLKLFSQWKKGKGEDEEGEETAIMQPEKRPLPASEAHTILKKMTSTDIAML GLSEENARPDWMIITVLPVPPPPVRPSVQDGGEDDLTYKLADIIRANASLKKMEQEGTPA HILADFEQLLQFHCATFIDNDIAGQPQAMQSSGRPIKSIRARLKGKEGRLRGNLMGKRVN FSARTVITGDPNLELDEVGVPRSIARNLTYPERVTPYNRAWLSELVRNGPNDYPGAKYVI RDTGERIDLKYNRRSDMALQPGWIVERHLKDGDYVLFNRQPSLHKMSMMSHRIKLMDYST FRLNLSVTPPYNADFDGDEMNLHVPQSEETRAELAQIAWVPRQIVSPQANKPVMGIVQDT LCGVRKFSLRDCLLDYVQVQQILLWVADWDGVVPMPCILKPKPYWSGKQILSMCVPKGIN VFLDKDKGLKNNFLKDDGVYIENGEIMYGVINKKVVGAAAGGLIHIIFREKGPVVCKRFF SGLQRVVNFWLLHNGFSIGIGDTVADKATTENINTTIAAAKAAVMDYIRYARHDWLKSDA GMTLRESFEANVNRVLNQARDDVGNHAEGSLPDFNNVKQMVVAGSKGSFINISQMSACVG QQSVEGKRIPFGFRHRSLPHFTKDDFTPESRGFVENSYLRGLTAQEFFFHAMAGREGLID TAVKTAETGYIQRRLVKALEDVMVCYDGTVRNSTNNVIQFAYGEDGIDGAQVETQGLLTL KLNDADFRRMFKVDLHEGGFKKGTLRAGLGDWSQELQDVLDDEFAQLQYDRDLLRNEIFQ SDQVQVRLPMNVPRLVLNAQQIFHIDPRKPSDLSPFDIVHGLRRVLEQLVVVRGEDPISL AAQENATLLFKIHLRSYLCSKMVIEEHHINKEAWEWILGEIEGQFARSVANPGEMCGTLA AQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINCAENIKTPSVTVYLTDEYSQSQ ESAKVIQTALAHTTLRTVTSAVEVHYDPDPSNTVIEEDKDFVEAFFAIPDEEVEASLERQ SPWLLRLELDRAQMLDKNLTMAEVAAKISAMFGQDIFVMHSEDNAEQLILRIRVVDNDPE KEAQGEEEIFLKNLATQMLSEIDLKGIKGIKKVFIVQQDNKTRRVDPVTGDWRTVVEWVL ETDGTNLAEVLAVDGVDAVRTSSNNPVEIFRVFGIEAARNSLLKETRAVIEFDGSYVNYR HLAMLCDIMTSQGALMAITRHGINRTNQGALMRCTFEETVELLVEAAAMGDVDDCHGVAQ NVLLGQLAPMGTGAFDLNIDVDMLKDVIVNHALPYDTMLAARNMDASGGKTPGGMTPYDS SSPASDDAFRVHEQAMFSPLAQAGGDEGGYSDYLSAGQSPMRTPLGGQSPGPGYGFSPVS PGYVPTSPGYATSPAGALGAMSPWTGTNGMGATSPAYSPTSPRIFGGATSPSYSPTSPSY SPASPNYSPSSPTGHGMSYSPTSPRMSPTSPAARYGAVTSPQYSPASPRFSPASPNYSPA SPAYTPTSPVYSPTSPAAARPGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASP QYSPSSPAFGGATSPGPAASGGAASPRRSRMSNKPAWQR NT seq 5340 nt NT seq  +upstreamnt  +downstreamnt atgagcgctgccgccggtcaatcgtttgcccactcgacggcgcccacccgcgccgtcagg gaggtccagtttggcatcctgagcccggaagagattagggcgatctcggtgtgcaagatc gaggtgcccgaggtcaaggacgaggccggcaagccgaggatcggtggtctctctgacccg cgcctcggcaccctcgaccgcaactacaagtgccagacgtgcggtgagggccaggccgag tgccccggtcactttggccacatcgacctggccaagcccgtcttccacatcggctacctg ggcaaggtaaaaaagatcctcgagtgcgtctgcactcactgcggacgcctcaagtcggat ccggtgaccgacccggcgtttgcggccatcctgcgggcgacggagcggaatcgcaagcgt cgcttccagcgggtgtgggagtactgctcgaagaagatgatttgcgaggccgacgacccc aaggacgaggacgagatgggcttcgaggagcagcccaagctgggccacggcggctgcggc cgctcgcagccagcgatccggcgagagggcctcaagctcttctcgcagtggaaaaagggc aaaggcgaggacgaggagggcgaggagacggccatcatgcagcccgagaagcggccgctg ccggcgtccgaggcgcacaccatcctcaaaaagatgacgtcgaccgacatcgcgatgctc ggcctgtcggaggagaacgcgcggccggactggatgatcatcacggtgctgcccgtgccg ccgccgccggtgcgtccgtcggtgcaggacggaggcgaggacgacctgacctacaagctg gccgacatcattcgcgccaacgcctcgctcaagaagatggagcaggagggcacgccggcg catatcctggccgactttgagcagctgctccagtttcactgcgccacgttcatcgacaac gacattgccggccagccgcaagcgatgcagtcgagcggcaggccgatcaagtcgatccgc gcccgcctcaagggcaaggagggccggctgcgaggcaacctgatgggcaagcgtgtcaac ttttcggcgcgcacggtcatcacgggcgatcccaacctcgagctcgacgaggtcggcgtg ccgcgctcgattgcgcgcaacctgacctacccggagcgtgtcacgccctacaaccgcgcc tggctgtcggagctcgtccgcaacggccccaatgactacccgggcgccaagtacgtcatc cgcgacacgggcgagcgcatcgacctcaagtacaaccggcggagcgacatggcgctgcag cccgggtggattgtcgagcgccacctcaaggacggcgactatgtcctcttcaaccggcag ccgtcgctccacaagatgagcatgatgtcgcaccggatcaagctgatggactactcgacc ttccggctcaacctcagtgtcacgccgccgtacaatgccgacttcgacggcgacgagatg aaccttcacgtgccgcagagcgaggagacgcgcgccgagctggcccagatcgcctgggtg ccgcggcagattgtgtcgccgcaggccaacaagcccgtcatgggcatcgtccaggacacg ctgtgcggcgtgcgcaagttttcgctgcgagactgccttctcgactacgtccaggtgcag cagatcctgctgtgggtcgccgactgggacggcgtcgtgccgatgccgtgcatcctcaag cccaagccctactggtcgggcaagcagatcctctcgatgtgcgtgcccaagggcatcaac gtcttcctggacaaggacaagggcctcaaaaacaacttcctcaaggacgacggtgtctac atcgagaacggcgagatcatgtacggcgtcatcaacaagaaggtggtgggcgcggcggcc ggcggcctgatccacatcatcttccgcgaaaagggccccgtcgtgtgcaagcgcttcttc tccgggctgcagcgcgtcgtcaacttctggctgctgcacaacggcttctcgatcggcatc ggcgacacagtggccgacaaggcgacaaccgagaacatcaacaccaccatcgccgccgcc aaggccgccgtcatggactacatccggtacgcgcggcacgattggctcaagtccgacgcc ggcatgacgctgcgcgagtcgttcgaggccaacgtcaaccgcgtactcaaccaggcgcgt gacgacgtcggcaaccacgccgagggcagcttgcccgactttaacaacgtcaagcagatg gtcgtcgccggctccaagggctcgttcatcaacatctcgcagatgtcggcgtgtgtcggc cagcagtcggtcgagggcaagcgcatcccctttggcttccgccaccgcagcctgccccac ttcaccaaggacgacttcacgcccgagtcgaggggcttcgtcgagaactcgtacctgcga gggctgaccgcgcaggagttcttcttccacgccatggccggtcgcgagggtctgatcgac acggccgtcaagacggccgagacgggctacatccagcgccgactggtcaaggcgctcgag gatgtcatggtgtgctacgacggcaccgtgcgcaactcgaccaacaacgtcatccagttt gcctacggcgaggacggcatcgacggcgcccaggtcgagacccagggcctgctgacgctc aagctcaacgacgccgacttccgccgcatgttcaaggtcgacctccacgagggcggcttc aagaagggcaccctccgtgccggcctcggcgactggtcgcaggagctgcaggacgtcctg gacgacgagtttgcgcagctccagtacgaccgcgacctgctgcgcaacgagatcttccag tcggaccaggtccaggtgcggctgccgatgaacgtgccgcgcctggtgctcaacgcccag cagatcttccacatcgacccgcgcaagccgagcgacctgtcgcccttcgacatcgtccac ggcctccgccgcgtcctcgagcagctcgtcgtcgtccgcggtgaggatccgatcagcctg gcggcgcaggagaacgcgacgctgctgttcaagatccacctccgctcctacctctgctcc aagatggtgatcgaggagcaccacatcaacaaggaggcgtgggagtggatcctgggcgag atcgagggccagttcgcgcgcagtgtggccaatccgggagagatgtgcggcaccctggcc gcccagagtatcggagagccggcgacgcagatgacgctcaacacgttccactatgccggt gtgtcgagcaagaacgtcacgctcggcgtgccgcgtctcaaggagatcatcaactgcgcc gaaaacatcaagacgccgtcggtcaccgtctacctcaccgacgagtacagccagtcgcag gagtcggccaaggtgatccagacggcgctggcgcacaccacgctgcgcaccgtcacgtcg gccgtcgaggtccactacgacccggacccgtccaacaccgtcatcgaggaggacaaggac tttgtcgaggccttcttcgccatccccgacgaggaggtcgaggcgagcctggagcggcag tcgccgtggctgctgaggctcgagctggatcgagcccagatgctcgacaagaacctcacc atggccgaggtcgccgccaagatcagcgccatgttcggccaggacatctttgtcatgcac tccgaggacaatgccgagcagctcatcctgcgcatccgcgtcgtcgacaacgacccggaa aaggaggcgcagggcgaggaggagatcttcctcaagaacctggccacccagatgctgagc gagatcgacctcaagggcatcaagggcatcaaaaaggtcttcatcgtccagcaggacaac aagacccggcgtgtcgaccccgtcacgggcgactggcgcaccgtcgtcgagtgggtgctc gagacggacggcaccaacctcgccgaggtgcttgccgtcgacggcgtcgacgcggtccgc acctcgtccaacaaccccgtcgagatcttccgcgtgtttggcatcgaggcggcgcgcaac tcgctgctcaaggagacgcgcgccgtcatcgagtttgacggctcctacgtcaactaccgc caccttgccatgctctgcgacatcatgacgagccagggagcgctcatggccatcacgcgc cacggcatcaaccgcaccaaccagggcgcgctgatgcggtgcaccttcgaggagaccgtc gagctgctcgtcgaggcagccgccatgggcgacgtcgacgactgccacggcgtggcccag aacgtgctcctgggccagctggcgcccatgggcaccggcgcattcgacctcaacatcgat gtcgacatgctcaaagacgtcattgtcaaccatgcgctgccctacgacacgatgctggcg gcgaggaacatggacgcctcgggcggcaagacgcccggcggcatgacgccttacgactcg agctcgcccgcctcggacgacgcgttccgcgtgcacgagcaggccatgttcagcccgctc gcccaggccggcggcgacgagggcggctacagcgactacctcagcgccggccagagcccg atgcgcacgccgctcggagggcagagcccggggccgggctacggcttctcgcccgtctcg ccgggctacgtgccgacctctccgggctacgccaccagcccggcgggcgcgctgggcgcc atgagcccgtggaccggcaccaatggcatgggcgccacgtcgccggcctacagcccgacg tcgccgaggatctttggcggcgcgaccagcccgagctactcgccgacgtcgccgagctac agccctgcgagccccaactactcgccctcgagccccacgggtcacggcatgagctactcg cccaccagcccgcggatgagcccgacgagcccggcggcgaggtacggcgccgtgacgagc ccgcagtactcgcccgcctcgccccgcttttcgccggcgagccccaactacagcccggcg agcccggcatacacgcccacgtcgcccgtctactcgcccacgtcgccagcggcggcgcgg ccaggaggcggcaagggcttcagcccgacgtcgccggcctactcgccgacgtcgccgcag tactcgccggcgtcgcccgcgttttcgccaacgtctccgcagtactcgcccgcatcgccc cagtactcgcccagcagcccggcctttggcggcgccaccagcccgggtcccgcagcgtcg ggtggagccgcctcgccgcggcggagccgcatgtccaacaagccggcgtggcagcggtga

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