KEGG   Pseudozyma flocculosa: PFL1_06593
Entry
PFL1_06593        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03018  RNA degradation
pfp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PFL1_06593
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFL1_06593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfp03019]
    PFL1_06593
   03041 Spliceosome [BR:pfp03041]
    PFL1_06593
Messenger RNA biogenesis [BR:pfp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PFL1_06593
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PFL1_06593
Spliceosome [BR:pfp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PFL1_06593
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 19320665
NCBI-ProteinID: XP_007882326
UniProt: A0A061H1D6
LinkDB
Position
Unknown
AA seq 97 aa
MSALLNFVDQQVLVVTQDGRVIVGTLKGSDSTGSVILAGSVERIFAPDCPVEEVPLGLYV
LRGDSICLIGDLDVEKDRSMDLAQLMAEPIPETRHAL
NT seq 294 nt   +upstreamnt  +downstreamnt
atgtcggcgctcctcaactttgtcgatcagcaagtgctggtcgtgacgcaggacgggcgc
gtcatcgtgggcacgctaaaggggtcagactcgacgggcagcgtcatcctcgccggctcc
gtcgagcgcatctttgcgccggactgccccgttgaagaggtcccgcttggcctatacgtc
ctccgaggcgatagcatatgccttataggcgacctcgacgtcgaaaaggataggtccatg
gaccttgcgcagctcatggccgagcccatcccggaaacacggcatgccctctag

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