Pseudozyma flocculosa: PFL1_06593
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Entry
PFL1_06593 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03018
RNA degradation
pfp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFL1_06593
09123 Folding, sorting and degradation
03018 RNA degradation
PFL1_06593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_06593
03041 Spliceosome [BR:
pfp03041
]
PFL1_06593
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PFL1_06593
mRNA degradation factors
5'-3' decay
Lsm complex
PFL1_06593
Spliceosome [BR:
pfp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PFL1_06593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
19320665
NCBI-ProteinID:
XP_007882326
UniProt:
A0A061H1D6
LinkDB
All DBs
Position
Unknown
AA seq
97 aa
AA seq
DB search
MSALLNFVDQQVLVVTQDGRVIVGTLKGSDSTGSVILAGSVERIFAPDCPVEEVPLGLYV
LRGDSICLIGDLDVEKDRSMDLAQLMAEPIPETRHAL
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgctcctcaactttgtcgatcagcaagtgctggtcgtgacgcaggacgggcgc
gtcatcgtgggcacgctaaaggggtcagactcgacgggcagcgtcatcctcgccggctcc
gtcgagcgcatctttgcgccggactgccccgttgaagaggtcccgcttggcctatacgtc
ctccgaggcgatagcatatgccttataggcgacctcgacgtcgaaaaggataggtccatg
gaccttgcgcagctcatggccgagcccatcccggaaacacggcatgccctctag
DBGET
integrated database retrieval system