Pseudozyma flocculosa: PFL1_06607
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Entry
PFL1_06607 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFL1_06607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_06607
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PFL1_06607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
Tti2
NT_N
Tra1_ring
Motif
Other DBs
NCBI-GeneID:
19320679
NCBI-ProteinID:
XP_007882340
UniProt:
A0A061H135
LinkDB
All DBs
Position
Unknown
AA seq
2269 aa
AA seq
DB search
MASSLAAQLANVRSYNADRLSASSAIASKVSYLFPPKTAVQQDLFTLHALATSGWNELCS
QDAAFASWRSANLLFGEESRQRDRLMLDQQENNDIDAAVGHFLQLAGPVLLSKAASKCIE
WLVRRFRVHEFSVDDLLAAFLPYHQTPQFARILSISKIDGKPHLQFLLAVKKSNAPLPAS
ALQAALLAPHQTTASLDLLRWVAGLVHPSDRAPAASSSSSSSSSKLASAAAASAAQPHRI
LVSFWTSTLVQMCARWAGQQQSGQLGAGGLSRSTANKKKSARAKQADAQSILTVLLPAAV
QVASSAQLGLDAQVGGYMLLCSIAAAFPLSRQAVQGIFGSLAKGLHSARGDRQPHPTLTR
AMLAASYALCASPDDVEDPLTLRSQAADRLVPDSIARALLLALQTTSDAIVAKVLAILLE
LPLASTANGGGGGADDDDDDAAAGLAFVRHLHEELLPAARTHRVKVLAALRQRRPAVFDA
AVKTSTADESHGSKRLTAVWQVVQSVMSVEAGTSPEDAANGQTGAGDASDTNVLWLAIHS
ADAGQRNLALGQLLDDVAAGKVSATDTMVRDALQSRIQDSSDEVLETLYSKPQSLLDAVD
GTTLLEAIVQALDNGNGSGDLAHHLRFLLAHFLGAHPELAGQVIQNAVWPRLLWTSAGRT
AAQTAVKVIAEVALDDSTLAGALLAGAARAGRSAASIEPAEANELVVAQLASQIVAIQDE
KQRQTWINFLFAQASVATGPDVDAVAALRRRPSQLLASLVLIRILSLVDENRFQRLASRA
VTHIANPVLAVPEAGGGSSKTKKTGDEAEASDAAAATPASSSAAASRGSVSADLHAAVYR
ATLAPQTMRKLAGELLQQVVLGLRVPKLSAILPAKDTTAVGLLSSLYATANTPSTGAALS
KLLLQTLFVRLRDSVLPFLANVWTHASTASVTVRLAALRHASAYLQAFAAEGMARDFQVI
VPALLIALADTEASIRMAALACLEDVLAIASASSPSSTKKQVEVFGYDAIYGEGASKDLQ
YLDAASLVRYLGELLARKTAYRNDAHFLPQLHRDLLNVHRQDGRKDVNYKNSILCFLCSH
VACWPDAALRLALLETLQGVSDASKLTTLLPLVRALVRNQRGATAGLVDTAVASAASARR
RYAELLFGCYDKSCRSVLEDASNGSWALFLDALAGGSDGSDVQTPAAQACLRDLDVDAAI
LVSVLAELRDTLTAKALEAPEAKRARTSLGADETVRRAAAVLVVLLEAASGKRLARSAAL
VSELFEVLRVAVELHASLAVNAEYLLQLAMSCLANLVAGLDADSAPADIVQSLRADTIVG
AIKASHNPQTFQHALLLLSRVATIAPEPVLHNVMPIFTFVGSTVLQRDDAFSYTVVEKTL
KSIVPALVASLKRRQAAVGGADIDVDVEAGAGDAEAQAQRHFALLRDARGFVRVFTDAAH
YVPKHRRQVFFKLLVEILGADDFGAAVCMLLVDRSAFKIAKQPRQDVEQTMQLPLAVIQA
QPVLVQLQALNQIWREVARIWTHRLEADPEALGEHVFLDRAGRTDKEHIDRHAEPIRQIQ
ALVLFVRQVLDSRVFSAQSASLSGAEAARAAGVRFEDFVRSAVAAADPHSLDNAAINSVA
REALHAAMPYVPIVNVMNVVALLIKAGDGQEGTAAAVAASRASGFALLASRMAALGADSD
DRKAVSAYTSDVVAAALDVLRTAGVSDALRQAALDAIKAISASALVSEHGALASTLPDLV
SVGRSTDGVPAPARITVFSITRRLADRLGPRLIPHLAKLVPFCLSTVAASVSAAAAASAD
AADTDTGSAAATSISTGSGQAASLRTGALDTLTGLFGSVPTFMTGYVSDIVRASISPELK
EAMASQSGSSTASERSLNALLSALIKRTPAQSLFDAVFKIWEQTLAGDGDATTKSVRLVA
LFDFLSRALRQTDRAAVSQTYKSVFRFMLRAFDLRRLQKAVRAGAGGVDDAAAAAAADVD
VGAIEEHAIQALLRMVLKLNESSFRPLFLRLFDWAVLDLVDDDTAPGDAALLARQVVLYK
TFNALSDQLRGLVSGYYSVLLDHSVEMLQHFGRGRIGGGAGGRPRGEGDDARALWTALVL
SVQKSARYDEGSFWTASRAQKVIPALLSQASLVDGPSAGSGRKRGGGGGGGATGAASTSL
TLQLPLDTVSSMLVKTTVAVAHAVPVEAVLKTLNGALLSQSSSRSSLGVRTVALRVLTAG
EAMLGLVPETVAQVSELLDDDERAIAHEAGAFRRAIEAALGESLDAYLT
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccctcgccgcacagctcgccaatgtgcgctcctacaacgccgaccgcctc
tcggcatcctcggccatcgcctccaaggtatcctacctcttcccgccaaagacggccgta
cagcaggacctcttcaccctccacgccctcgccaccagcggttggaacgagctatgctcc
caggacgccgcctttgcctcctggcgcagcgcaaacctcctctttggcgaagagagcagg
cagcgcgaccgcctcatgctcgaccagcaagagaacaacgacatcgacgccgccgtcggc
cacttcctccagctcgccggacccgtcctcctctcaaaggcggcctcaaagtgcatcgag
tggctcgtacgccgcttccgcgtacacgagttcagcgtagacgacctcctcgccgccttc
ctcccctaccaccagacgccgcagttcgcccgcatcctcagcatctccaagatcgacggc
aagccccacctccagttcctcctcgccgtcaaaaagtcaaacgcccctctccccgcatcg
gcgctccaggcggccctcctcgccccccaccagaccaccgccagcctcgacctgcttcgc
tgggtggctggcctcgtacacccctcggaccgggcacccgctgcttcctcgtcatcgtcc
tcgtcgtcgtccaagctcgcctctgctgccgccgcgtctgccgcccagccgcaccgcatc
ctcgtcagcttctggacctcgacgctcgtccagatgtgcgccaggtgggcaggacagcag
cagagcggccagctcggcgccggcggcctctcgcgctcgacggccaacaagaaaaagtcg
gcgcgcgcaaagcaggcagacgcccagtcgatcctcaccgtcctcctgcccgcagccgtc
caggtggccagcagcgcccagctcggactcgacgcccaggtcggaggctacatgctcctc
tgctcgatcgccgccgccttcccgctcagccggcaggcggtgcagggcatctttggcagc
ctcgcaaagggtctccacagcgctcggggcgaccgccagccgcacccgaccctgacgcgc
gccatgctcgccgccagctacgccctctgcgccagcccagacgacgtcgaggacccgctg
acgctgcgctcccaggccgccgaccgcctggtgccggacagcatcgcccgcgccctcctc
ctcgcgctccagaccacctcggacgccatcgtcgccaaggttctcgccatccttctcgag
ctgccccttgcctcgacggccaacggcggcggtggcggcgccgacgacgatgacgacgac
gcggcagccggcctcgccttcgtccgccacctccacgaagagctgctgcctgccgcccgt
acccaccgcgtcaaggtgctcgccgctctccgacagcgccgccccgccgtgtttgacgcc
gcggtcaagacgtccaccgccgacgagtcccatggcagcaagaggctcacggccgtctgg
caggtggtgcagtccgtcatgagcgtcgaggcgggcacctcgcccgaggacgccgccaac
ggccagaccggcgccggcgacgcgtccgacaccaacgtcctctggctcgccatccacagc
gccgacgccggccagcgcaacctcgccctcggccagctgctcgacgacgtcgccgccggc
aaggtgtcggccacggacaccatggtccgcgatgcgctccagtcgcgcatccaggactcg
tcggacgaggtgctcgagacgctctactcgaagccgcagagcctgctcgacgccgtcgac
ggcacgacgctgctcgaggccatcgtgcaggcgctcgacaacggcaacggcagcggcgac
ctcgcgcaccacctccgcttcctcctggcccacttcctcggcgcccacccggagctggcc
ggccaggtcatccagaacgccgtctggccccggctgctgtggacctcggccgggcgcacg
gccgcccagacggcggtcaaggtcatcgccgaggtcgcgctcgacgactccacgctcgcc
ggcgccctgctggcgggcgctgcgcgagccggccggagcgcggcttcgatcgagcccgcc
gaggccaacgagctggtcgtcgcgcagctggcgtcgcagatcgtcgccatccaggacgaa
aagcagaggcagacttggatcaacttcctctttgcgcaggcctcggtcgccaccggcccc
gatgtcgatgccgttgccgcgctccggcgccgcccttcgcagctgctggcgtcgctggtg
ctgatccgcatcctcagcctcgtcgatgagaatcgcttccagcgcctggccagccgcgcc
gtcacccacatcgccaacccggtgctggcggtgcccgaagccggcggcggcagcagcaag
accaagaagacgggcgacgaagccgaggccagcgacgcggcggcggcgaccccggcgtcc
tcgtcggccgccgccagccgcgggagcgtcagtgccgacctgcacgccgccgtctaccgg
gccacgctcgcgccgcagacgatgcgcaagctggcaggcgagctgctgcagcaggtcgtg
ctgggcctgcgcgtgcccaagctgtcggccatcctcccggccaaggacacgacggccgtc
ggcctgctctcgtcgctctatgccaccgccaacacgccgtcgacgggcgccgcgctgtcc
aagctgctgctgcagacgctctttgtgcgcctgcgcgactcggtgctgccgttcctcgcc
aacgtctggacccacgcgtcgacggccagcgtcacggtgcggttggcggcgctgcggcat
gccagcgcctacctccaggcgtttgccgccgagggcatggcgcgcgacttccaggtcatt
gtgccggcgctgctgatcgcgctggccgacacggaggcgtcgatccgcatggcggcgctc
gcctgcctcgaagacgtgctggcgatcgcgtcggcctcgtcgccgtcgtcgaccaagaag
caggtcgaggtgttcggctacgacgccatctacggcgagggcgcgtccaaggacctgcag
tacctcgacgcggcctcgctggtccgctacctgggcgagctgctggcgcgcaagacggcc
taccgcaacgatgcccacttcctgccgcagctccaccgcgacctgctcaacgtccaccgg
caggacggccgcaaggacgtcaactacaagaactcgatcctctgcttcctctgctcgcac
gtcgcctgctggcccgacgccgcgctccgcctggcgctgctcgagacgctgcagggcgtc
agcgacgcctcgaagctgacgacgctgctgccgctggtgcgcgcgctcgtccgcaaccag
agaggcgccaccgccggcctcgtcgacaccgccgtcgcgtcggccgcgtcggcgcgccgc
cggtacgccgagctgctgtttggctgctacgacaagtcgtgccgatcggtgctcgaggac
gcgtccaacggcagctgggccctcttcctcgacgccctcgccggcggcagcgacggcagt
gacgtccagacgcccgccgctcaggcgtgcctgcgcgacctcgacgtcgacgccgccatc
ctggtttcggtgctggccgagctgcgcgacacgctgacggccaaggcgctcgaggcgccc
gaggccaagcgcgcgcgcacctcgctcggcgccgacgagacggtgcgccgcgccgccgcc
gtgctcgtggtgctgctcgaggcggcgtcgggcaagcggctggcgcgctcggccgcgctc
gtgtcggagctgttcgaggtgctccgcgtcgccgtcgagctccacgccagcctcgccgtc
aacgccgagtacctgctgcagctcgccatgtcgtgcctggccaacctcgtcgccggcctc
gacgccgactcggcgcccgccgacattgtgcagagcctgcgcgccgacaccatcgtcggc
gccatcaaggcgtcgcacaacccgcagacgttccagcacgcgctgctcctcctctcgcgc
gtcgccaccattgcgcccgagcccgtgctgcacaacgtcatgcccatctttacgtttgtc
ggatccacggtgcttcagcgcgacgacgccttcagctacacggtggtcgaaaagacgctc
aagagcatcgtccccgcgctcgtcgcctcgctcaagcgtcgccaggcggccgtgggcgga
gccgacatcgacgtcgacgtcgaggcaggcgcgggcgatgccgaggcgcaggcgcagcgc
cactttgcgctgctgcgcgacgcgcgcggctttgtccgcgtcttcaccgacgccgcccac
tatgtgcccaagcaccgccgacaggtcttcttcaagctgctcgtcgagatcctgggcgcc
gacgactttggcgccgccgtctgcatgctcctcgtcgaccgctccgccttcaagatcgcc
aagcagccgcgccaggacgtcgagcagacgatgcagctgccgctcgccgtgatccaggcc
cagccggtgctggtccagctgcaggcgctcaaccagatctggcgcgaggtggcccggatt
tggacccaccgcctcgaggccgaccccgaggcgctcggcgagcacgtcttcctcgaccgc
gccggccgcaccgacaaggagcacatcgaccggcacgccgagcccatccgccagatccag
gcgctggtcctctttgtccggcaggtgctcgactcgcgcgtgttttcggcccagtcggcc
tcgctcagcggcgccgaagccgcccgtgccgccggcgtccgcttcgaggactttgtgcgc
tccgccgtcgccgcggccgacccgcactcgctcgacaacgccgccatcaactcggtggcc
cgcgaggcgctccatgcggcgatgccgtacgtgcccatcgtcaacgtgatgaacgtcgtc
gccttgctcatcaaggcgggcgacggccaggagggcaccgcggcggcagtggcggccagc
cgggccagcggctttgcgctcctcgcctcgcgcatggccgcgctcggcgccgactccgac
gaccgcaaggccgtctcggcctacacgtcggacgtggtggccgccgccctcgacgtgctt
cgcaccgccggcgtctcggatgcgctgcgccaggccgcgctcgacgccatcaaggccatc
agcgcctcggcgctggtctcggagcacggcgcgctcgcctcgacgctgccggacctggtc
tcggtgggacggtcgaccgacggcgttcctgccccggcgcgcatcaccgtgttctccatc
acgcggcgactggccgaccggcttggcccgcgcctcatcccgcacctggccaagctggtg
ccgttctgcctctcgacggtggctgcgtcggtttctgctgccgctgctgcctcggccgac
gctgccgataccgacaccggctccgccgccgcgacctcgatctcgacgggcagcggccag
gcggcgtcgctgcgcacgggcgcgctcgacacgctgacgggcctgtttggcagcgtgccc
acgtttatgacgggctacgtgtcggacattgtgcgcgcctcgatctcgcccgagctcaag
gaggccatggcgagccagagcggctccagcacggcgagcgagcgctcgctcaacgcgctc
ctctcggcgctcatcaagcgcacgcccgcccagagcctgtttgacgccgtcttcaagatc
tgggaacagaccctcgccggcgacggcgacgctacgaccaagtcggtgcggctggtggcg
ctgttcgacttcctcagccgggcgctgcgccagacggaccgggcggccgtgtcgcagacg
tacaagtccgtcttccgcttcatgctgcgcgcgtttgacctgcgccgcctgcagaaggcg
gtccgggctggcgctggtggcgtggacgacgccgccgcggccgccgccgccgacgtcgat
gtgggtgcgatcgaggagcacgcgatccaggcgctgctgcggatggtgctcaagctcaac
gagagcagcttccggccgctgttcctgcgcctgtttgactgggcggtgctggacctggtc
gacgacgatacggcgccgggcgacgcggcgctgctggcgcggcaggtggtgctgtacaag
acgttcaacgcgctgtcggaccagctgcgcgggctggtgtcgggctactattcggtgctg
ctcgaccactcggtcgagatgctgcagcactttggccgcggccgcatcggaggcggtgcc
ggtggcaggccgcgcggcgagggcgacgatgcgcgtgcgctgtggacggcgctggtgctg
tcggtgcagaagagcgcgcggtacgacgagggatcgttctggacggcgtcgcgggcgcaa
aaggtgattccggcgctgctgtcgcaggcgtcgctggtcgatgggccgagcgcgggctcg
ggccggaagcgcggcggtggcggtggcggtggcgcgaccggcgccgcttcgacgtcgctg
acgctgcagctgccgctggatacggtgtcgtcgatgctcgtcaagacgacggtggcggta
gcgcacgccgtccccgtcgaagcggtgctcaagacgctcaacggcgcgctgctgtcgcag
tcgtcgtcgcggtcgtcgctgggcgtgcgcaccgtggcgctgcgcgtgctgacggccggc
gaggcgatgctgggcctggtgcccgagacggtggcccaggtctcggagctcctcgacgac
gacgaacgcgccattgcccacgaggccggcgcgttccgccgtgccattgaggcggcgctg
ggcgagagcctggatgcgtacctgacctag
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