Pseudozyma flocculosa: PFL1_06800 Help Entry PFL1_06800        CDS       T03141                                  Name (RefSeq) hypothetical protein   KO K20103   ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] Organism pfp  Pseudozyma flocculosa Brite KEGG Orthology (KO) [BR:pfp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pfp03019]     PFL1_06800 Enzymes [BR:pfp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      PFL1_06800 Messenger RNA biogenesis [BR:pfp03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      PFL1_06800 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD PIN-like_DDX60 ResIII Helicase_C Motif Other DBs NCBI-GeneID:  19320871 NCBI-ProteinID:  XP_007882537 UniProt:  A0A061H0N5 LinkDB All DBs Position Unknown AA seq 1982 aa AA seqDB search MMSRVSSLASCWLKGGSNGGAGQAVDLMNDYCGQQLFVVDGDSLLEFLLHRERIYSPLDV RIGPHPVHVAFVFETFLANLVRARANFHLVWFDDRSHLSALATRRGGDTLTDVELAARCY IRTMLKTHVAARCADVAQHSFSAIDSPGWTSYVRSKSPYFVLLHDGLYAAGNQSPLGQIA PNGDRETLPHDGQQAASNCDDDDLVAAAQTCAIYAHLKGDGEAKGSRPPLSIALIREGMF VDNKVRTFVIEASIKIRHECIQARSQAAFSHLRAQVDAATTAVATLLSQLGIAPSLGHED GTQLDSCPAQLEHIALQVAKTIDLDCRATPVVAQAVLLHAAVGQTLDVEDRVSAADAVGE LGAVCGDTAVRRGLVLLYCASERALSALSQPSASDRPLLLVDPCLFLVIAAMCSESEELP ACTPTIEAGLVCFQRLCASAGIAATLPDARRGPALRDHEGPSETRLLPYNHDFLGPKLPQ LGGSAANESHAMRGTVDFGGIAYEDLFQQRSDLTLGTQRAHITVDPAKLQGLTPYERERY IKYREMRELRKQQGLAAWLHSYAASLTGANGGILEKQTITVGQARTKVKQQQQQHHHHHT QHSDPTAKETKAASKNKPAKLSKKDAIIAANKAAKAHKDHDRSQSKWAHFVQEKDLGPAL SKVDGGEVAASAGKLLQRREQLSEELRRRLVHGKHDRRDTLLTWLLVLRLALESWLVSCA TASKEAGIKHAVDVFVACQKVTDQLPASLDCSEPNIDLAAAFSIWTALAALGLEEVLKQR LGPAWDVIRDLTEQQGRRGDVDKLMAQLPFDMPLPKRRKRTSLPPHLGPARFQLLHCGDF MERQLDSAADARVTFLPDRWQREVLDEIDAGSSILVVAPTSAGKTFSSFYAMEKVLRQDD EGAVIYVAPTKALVNQIAAEIEARFAKAYAGVGRTLYSICTADYSLNNPFKSQILITVPE MLDVLLLRDSATGNLVPRIRRIILDEVHVLSESCRGSIYEQLIVMCPAPIIALSATIGNV DDFGSWLATVSAAHGHRLAVVQHKTRYSDLVKHVYVPRAPFDEFRGVDVGEARSSGGGGS DASEDDDDGGRGGRLRHLHPWTALIQGNAQLVDDLEMSPAEMVQAYDAMRSDTLAFQARL RQQLETWMDRPDARSKASPFLRLLASLDGGLVESVLEYDLERPFGNKHRDFWNQALLQLL TDMDGSGLLPGLFFNYDRNVVESMVETVVGALVEAEQEYKESDQWRAELERLERAQKEHD AARKRLDRDLARAKEGSSARTRAEEALDRFLSANPPPMAGFDPEGVLPRFSFASFKKALA DDEIQGELAAIEGSVAPHLVEGLRRGVAAHHAGLSNKYRQLVERWYRMGRIRVCFCTGSL ALGINMPAVSSVFIGHSMFLTAVQYRQAAGRAGRRGLDLRGNVVFFGVHIDRVHRLLTSK VPELQGSFPLSTTLVLRLHMMLHRPDTVATAQSMASAVLCLSRMSMARSDAPRVQHQMRA SIEYLRRIGLLDERGRPVDLAGLVSRLHYAEPSNFAFAALLRDGFFYRLCQRHRGGDLKY AGRELMLVLCHLFCRIERLPGEGMYDVVRGSPSKVFLEPMPDEAAQILARHSRHATDTYR DFVVALAQREGPKLPRDDSLPLSGRLVGGGDSVGDDDGSRDDSITRSDTAGMASGGPTEP AATSAPSSGSWDASTVPTSPATTTVSSAPAPATTRSVFWQLLSLGDQYESVGEISQSLQP GLSLTAEAIPSFDVFLRHRRGDDGDGDEQPTLNAYLLDFYKHGIAAELVRANGLRRGDVW VKLDDFYRVLCALRASIETLLRSMIAAKERASAAVGRSGVSRGRGRDAAKAEASSDWEGH DESESDEARSVAHGRRAIGSSGDDDEQQPSAGLDPAPTDDESDDDDDVDGGDHQGAAQAA ATTTTTSTEPHHGGAQKKRRVPSIPPLIALDAEQRDADLWEFYVLLDHVQRQFGRRFFAI FS NT seq 5949 nt NT seq  +upstreamnt  +downstreamnt atgatgtcccgggtcagcagcctggcatcgtgctggctcaagggcggcagcaacggcggg gcgggccaggcagtcgacctgatgaacgactactgcggccagcagctctttgtcgtcgat ggcgactcgctcctcgagttcctgctgcaccgcgagcgcatctactcgcccctcgacgtc cgcatcggcccgcaccccgtccacgtcgcattcgtcttcgagacattcctcgccaacctc gtccgcgcccgagccaacttccacctcgtctggttcgacgaccgcagccacctctccgcc ctcgccacccgtcgcggtggggacactctcaccgacgtcgagctcgccgcccgatgctac attcgcaccatgctcaagacgcacgtcgccgctcgatgcgccgacgtcgcgcagcactcc ttcagcgccatcgacagtcctggctggacgtcgtacgtccgctccaagtcgccctacttt gtcctgctccacgacggcctgtatgccgcgggcaaccagagcccgctcggccagattgct cccaatggcgatcgcgaaacactcccacacgacggccagcaagctgcctcgaattgcgac gacgacgatctggtagccgcggcgcagacctgcgccatctacgcccacctcaagggcgac ggcgaggccaaaggcagccggcccccgctctcgatcgccctgatccgggagggcatgttc gtcgacaacaaggtgcgcacctttgtcatcgaagcctcgatcaagatccgccacgagtgc atccaagcgcgctcccaggcggcattctcgcaccttcgcgcccaggtcgatgctgccacg acggccgttgcgactctactgagccagctcgggattgcgccctcgctcggccacgaggac ggcacgcagctggacagctgtccggcgcagctcgagcacatcgctcttcaagtcgccaag acaatcgacctcgattgtcgcgccaccccggtcgtagcgcaggcggtcctgctccacgcc gccgtcggccagacgctcgatgtcgaagaccgagtctccgctgccgatgcggtgggcgag ctcggcgcggtctgcggcgatactgccgtgcggaggggcctcgtcctgctctattgcgcg tcggagcgtgccctctccgctctctcccagccctcagccagcgaccggccgttgctgctc gtcgacccgtgcctcttccttgttatagccgcgatgtgcagcgagtctgaagagctaccc gcgtgcacaccgacgatcgaggctggacttgtgtgcttccagcgtctctgtgccagcgca ggcatcgccgcgacgctgccagacgcacggcgcggacctgccctgcgcgaccacgagggg ccgagcgagactcggctgctgccgtacaaccacgacttccttggacccaagctgccgcaa ctgggcggctcagcggccaacgagagccacgccatgcgcggcacggtcgatttcggcggc atcgcctacgaggacctcttccagcagcgctccgaccttacgcttggcacgcagcgcgcc cacatcaccgtcgatccggccaagctgcagggattgacgccgtacgagcgggagcggtac atcaagtacagggagatgagggagctgcgcaagcagcagggcctcgcggcgtggctgcac tcgtacgccgccagcctgaccggcgccaatggcggcatcctcgagaagcagaccatcacg gtggggcaggcgaggacgaaggtcaagcagcagcagcagcagcatcatcatcatcataca cagcattcagatccgacggccaaggagaccaaggctgcctccaaaaacaagccagctaag ctcagcaaaaaggatgccatcatcgcggccaacaaggcagcgaaagcgcacaaggaccac gaccgctcgcagagcaagtgggcgcactttgtccaggaaaaggacctcggccccgcgctc tccaaggtcgacggcggcgaggtggccgcgtcggcgggaaagctcctgcagcgccgcgag cagctctccgaagagctgaggaggcgcctcgtgcacggcaagcacgaccgacgcgacacg ctgctgacgtggcttctcgttctccggctcgcgctggagtcgtggctggtttcgtgcgcg accgcgagcaaggaggccggcatcaagcacgcggtcgacgtctttgtcgcctgccagaag gtgaccgaccagctgcccgccagcctcgactgctccgagcctaatatcgacctcgccgcc gcgttctcgatatggacggctctggcggcgttgggtctcgaggaggtactcaagcagcgc ctgggccccgcctgggacgtcattcgcgacctcacggagcagcagggcaggcgcggcgac gtcgacaagctcatggcgcagctcccgttcgacatgccgctgcccaagcgccgcaagcgc acctcgctgccgccgcacctcggtcccgcccgcttccagctgctgcactgcggcgacttc atggagcgccagctcgactcggccgccgacgcgcgcgtcacgttcctgcccgaccgctgg cagcgcgaggtgctcgacgagatcgacgccggcagctcgatcctcgtggtggcgcccacc agcgccggcaagacgttttcgtcgttctacgccatggaaaaggtgctgcgccaggacgac gagggcgccgtcatctacgtggcgccgaccaaggcgctcgtcaaccagatcgccgcagag atcgaggcgcgcttcgccaaggcctacgcgggcgtcggccggacactctactcgatctgc acggccgactactcgctcaacaacccgttcaagtcgcagatcctcatcacggtgcccgag atgctcgacgtgctactgctgcgcgactcggcgacgggcaacctggtgccgcgcatccgc cgcatcatcctcgacgaggtccacgtgctctccgagtcgtgccgcggctcgatctacgag cagctcatcgtcatgtgcccggcgcccatcatcgcgctgtcggccaccatcggcaacgtc gacgactttggcagctggctcgccaccgtatcggcggcccacgggcaccggctcgccgtc gtccagcacaagacgcggtacagcgacctggtcaagcacgtctatgtccccagggcgccg tttgacgagttccgcggcgtcgatgtcggcgaagcgcgcagcagcggcggcggcggcagc gacgccagcgaagacgacgacgacggagggcgtggcgggcggctgcgccacctgcacccg tggacggccctaatccagggcaacgcgcagctggtcgacgacctcgagatgagccccgcc gagatggtgcaggcctacgacgccatgaggtccgacacgctggcgttccaggcgcgcctg cgccagcagctcgagacgtggatggaccggcccgacgcccggtccaaggcatcgcccttc ctgcgcctcctcgcgtcgctcgacggcggcctggtggagagcgtcctcgagtacgacctg gagaggccgtttggcaacaagcaccgcgacttttggaaccaggcgctgctgcaactcctc accgacatggacggcagcggcctgctgcccggcctcttcttcaactacgaccgcaacgtc gtcgagtcgatggtagagaccgtcgtcggcgcgctcgtcgaagcggagcaagagtacaag gagagcgaccagtggcgcgccgagctcgagaggctcgagagggcgcagaaggagcacgac gcggcgcgcaagaggctcgaccgcgaccttgcccgcgccaaggagggcagcagcgcccgg acaagggccgaggaggccctcgaccgcttcctctcggccaacccgccgcccatggccggc ttcgaccccgagggcgtgctgccccggttcagctttgccagcttcaaaaaggcgctcgcc gacgacgagatccagggcgagctggccgccatcgagggcagcgtggccccgcacctcgtc gagggcctccggcgcggcgtcgcggcccaccacgccggcctgtccaacaagtaccgccag ctggtggagcgctggtaccgcatgggccgcatccgcgtgtgcttctgcacgggctcgctc gccctcggcatcaacatgcccgccgtcagctccgtgtttatcggtcacagcatgttcctc acggcggtccagtaccggcaggcggcggggcgcgcgggccgccgcgggctggacctgcgc ggcaacgtcgtcttttttggcgtgcacatcgaccgcgtccaccgcctgctgacgtccaag gtgcccgagctgcagggcagcttcccgctctcgacgacgctggtgctgcgcctgcacatg atgctgcaccgccccgacacggtggccacggcgcagtcgatggcctcggcggtgctctgc ctgtcgcgcatgtcgatggcgcgcagcgacgcgccgcgcgtccagcaccagatgcgcgcc agcatcgagtatctgcgccgcatcggcctcctcgacgagcgcggccggcccgtcgacctg gccggcctcgtctcgcgcctgcactacgccgagccgagcaactttgcctttgccgcgctg ctccgcgacggcttcttctaccgcctgtgccagcggcaccgcggcggcgacctcaagtac gccggacgcgagctcatgctcgtcctgtgccacctcttctgccgcatcgagaggctgccg ggagagggcatgtacgacgtggtgcgcgggtcgccgtccaaggtctttctcgagcccatg cccgacgaggcggcccagatcctcgccaggcactcgaggcacgccacggacacgtatcgc gactttgtcgtggccctggcgcagcgcgagggccccaagctgccgagggacgactcgctg ccgctgtctgggcgcctcgttggcggcggcgacagtgttggcgacgacgatggcagtcgc gatgacagcatcactcgctccgacaccgcgggcatggcttcgggcggccctacagagcca gccgcgacgtcggcgccgtcgtccggctcctgggacgcctccaccgtcccgacgtcgcct gccacgacgacggtctcgtccgccccggcaccggccacgacgcgctccgtcttctggcag ctcctctcgctgggcgaccagtacgagagcgtgggcgagatttcgcagtcgctccaaccg ggcctctcgctgacggccgaagccatcccatcgttcgacgtcttcctgcgtcatcgacgc ggcgacgacggcgacggcgacgagcagccgacgctcaacgcgtatctgctcgacttttac aagcacggcatcgcggccgagctggtgcgcgccaacggcctgcggcgcggcgacgtgtgg gtcaagctcgacgacttctaccgcgtcctctgcgcgctccgcgcctcgatcgagacgctc ctccgctccatgatcgccgccaaggagagggcgtcggcggccgtgggtcgcagcggcgtc agtcgaggacgtggccgtgatgcggcgaaggcggaggcgtcgagtgactgggagggtcac gatgagagcgagagtgacgaagcgcgttcggtcgcccatggccgacgagccatcggcagc agcggcgacgacgatgaacaacaacccagcgcgggcctcgatcccgcgcccaccgacgac gagagcgacgacgacgacgacgtcgatggcggagaccaccagggcgcagcgcaagccgcc gccaccaccaccaccacctcgaccgagccgcaccacggcggcgcgcaaaagaagcggcgc gtcccctcgatcccgccgctgattgcgctcgacgccgagcagcgcgacgcggacctgtgg gagttctacgtgctcctcgatcacgtccagcgccagtttggtcgccgcttctttgctatc ttttcctag

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