Pseudozyma flocculosa: PFL1_06836
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Entry
PFL1_06836 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_06836
Enzymes [BR:
pfp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
PFL1_06836
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PFL1_06836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
19320904
NCBI-ProteinID:
XP_007876372
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MGANTAELLLRVCADIAAHLVDAHDNAQPVSLNHLRTRIAKKHAYNGVPRLTDIIAAIPD
AYRKSLVPALKAKPVRSASGIAVVAVMCKPHRCPHIALTGNICVYCPGGPDSDFEYSTQS
YTGYEPTSMRAIRARYDPYEQSKSRVQQLRELGHPVDKVEYIIMGGTFMSLSQDYRDTFI
AQLHNALSGFNGTDVDEAVRYSERALTKCIGITIETRPDYCLRPHLSQMLRYGCTRLEIG
VQSVYEDVARDTNRGHTVKAVCETFQLAKDAGYKIVAHMMPDLPNVGVERDMEQFKEYFE
NPAFRTDGLKLYPTLVIRGTGLYELWRTGRYRNYTPSFLVDLVARILALVPPWTRVYRVQ
RDIPMPLVSSGVENGNLRELALERMRDFGVTCRDVRYREVGLHEIHTRVRPEEVEFIRRD
YTANGGWESFLAYEDPERDILIALLRLRKCSAAGTYRPELVRHGQCSIVRELHTYGSAVP
IHSRDPTKFQHQGFGTLLMEQAERIARDEHGSRKLAVISGVGTRDYYRRLGYHLEGPYMV
KMLVDEDEDEGEGEDEGAWSVRGAPGDDDDDGYYY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaccgcagagctcctcctgcgggtctgcgcagacattgccgcacacctc
gtcgacgcccacgacaatgcccagcccgtatccctcaaccacctccgcacccgcatcgcc
aaaaagcacgcctacaacggcgtacccaggctcaccgacatcatcgccgccatcccagat
gcctaccgcaagtccctcgtacccgccctcaaggcaaaacccgtacgctccgcatccggc
atcgccgtcgtcgccgtcatgtgcaagccacaccgatgcccgcacatcgccctcaccgga
aacatctgcgtatactgccccggcggtcccgactccgacttcgagtacagcacacagtcc
tacaccggctacgagcccacctcgatgcgcgccatccgcgcacgctacgacccctacgag
cagtccaagtcgcgcgtacagcagctccgcgagctcggtcaccccgtcgacaaggtcgag
tacatcatcatgggcggcacctttatgagcctctcgcaagactaccgcgacaccttcatc
gcccagctccacaacgcactcagcggcttcaacggcaccgacgtcgacgaggccgtccgc
tactcggagcgcgcactcacaaagtgcatcggcatcaccatcgagacgcgccccgactac
tgcctccgcccgcacctctcccagatgctccgctacggctgcacccgcctcgagatcggc
gtccagtccgtctacgaggacgtcgcccgcgacaccaaccgcggccacaccgtaaaggcc
gtctgcgagaccttccagctggccaaggacgccggctacaagatcgtcgcccacatgatg
cccgacctgcccaacgtcggcgtcgagcgcgacatggagcagttcaaagagtactttgag
aacccggcattccgcaccgacggcctcaagctctacccgaccctcgtcatccgcggcacc
ggcctctacgagctgtggcgtacgggccgctaccgcaactacacgccctcgttcctcgtc
gacctcgtggcgcgcatcctcgccctcgtcccgccctggacgcgcgtctaccgcgtacag
cgcgacatccccatgcccctcgtatcctcgggcgtcgaaaacggcaacctgcgcgagctc
gccctggagcggatgcgcgactttggcgtcacctgccgcgacgtccgctaccgcgaggtg
ggtctgcacgagatccacacgcgcgtccgccccgaggaagtcgagttcatccggcgcgac
tacaccgccaatggcgggtgggagagttttctggcctacgaggatccggagcgcgacatt
ctcattgcgctgctgcgcctgcgcaagtgcagcgccgcgggcacctaccggccggagctg
gtgcgccatgggcagtgctcgattgtgcgcgagctgcacacgtacggcagcgccgtgccc
atccactcgcgcgacccgaccaagttccagcaccagggcttcggcacgctcctcatggag
caggccgagcgcatcgcccgcgacgagcacggcagccgcaagctcgccgtcatcagcggc
gtcgggacgcgcgactactaccgcaggctcgggtaccacctcgaggggccttatatggtc
aagatgcttgtcgacgaggacgaggacgagggcgagggcgaggatgagggtgcgtggtcg
gtgcgcggcgcaccaggcgacgacgacgacgacggatattactactga
DBGET
integrated database retrieval system
