Pseudozyma flocculosa: PFL1_06895
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Entry
PFL1_06895 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_06895
Enzymes [BR:
pfp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PFL1_06895
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFL1_06895
Prokaryotic type
PFL1_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
19320962
NCBI-ProteinID:
XP_007881172
UniProt:
A0A061H3F6
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSDQPQNDATIAKQEPVQDAALPPAPSSTMPEDPAASAASAAPKRALEEDAAAPAGDAGT
APAEATTSSAAGGAGGEAKRVKIEEAQQPDRRDRKGRGGSRSGNDRNTERRDRRGTRDAG
AEAGGEAAGDEAANGAEVRLPKRKVAVKFGYCGIGYSGLQINPGVKTIEGDVFDAFCQAG
AVSKDNAVNPNKVGLQRAARTDRGVHAAGNLLSLKLILEPPGLAQEGKTLVERVNELLPP
IIRVWGITRVQNAFNARTSCDSRMYEYLLPTYVFLPPKPGSAMWKMVDAINREEKAKTGA
DAPALSDVLDHPFWREHGTADDFSTDIKAKKAWRMPASQVEHVRALMAKYSGSHNFHNFT
IDKEFRDRAAQRFMKALHVSEPKMVNGTEWISIKFHGQSFMYHQIRKMIGLVVLVGRTNA
PASLIPETFGPARIHIPKAPGLGLLLEEPLFGGYNQRVEHSNRKLDNLVSSNAKKGVAAA
NNPEDEKRDAVEFDSHKSEMEAFKQQYIYDRIMLTEEETSEFGKWLNYLDVFQGPDFEYL
NPKGVIPQSAILKVGELRRAPGGQLKGSFGGGTTAATTTTTTTDAAAAGEEGAAIDGSDD
DDDDERAFLNSKDRAEYEG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaaccccagaacgacgccacaatagccaagcaggagcccgtccaggacgcg
gcgctaccacctgccccgtcgtcgacgatgcccgaagaccccgctgcctccgccgccagc
gccgcgccgaagcgggctctcgaagaggatgcagccgcacctgccggcgatgcgggcacg
gccccggccgaggccacgacgtcgtcagcggctggcggcgccggcggcgaggccaagcgc
gtcaagatcgaagaggcccagcagcccgaccgcagggaccgcaagggccgcggcgggtcc
cgatccggcaacgaccgcaacaccgagcgccgggaccggaggggcacgcgcgatgccggc
gccgaggcgggaggcgaggcggcaggggacgaggcggccaacggcgccgaggtgcgcctg
cctaagcgcaaggtggcggtcaagtttggctactgcggcatcggctactcgggcctccag
atcaacccgggcgtcaagacgatcgagggcgacgtgtttgacgccttctgccaggccggg
gcggtgagcaaggacaacgccgtcaaccccaacaaggtgggcctgcagcgcgccgcgcgc
actgatcgcggcgtccacgcggcgggcaacctgctctcgctcaagctcatcctcgagccg
ccgggcctcgcgcaagagggcaagacgctcgtcgagcgcgtcaacgagctgctgccgccc
atcatccgcgtgtggggcatcacgcgcgtgcagaatgccttcaacgcgcgcaccagctgc
gactcgcgcatgtacgagtacctgctgcccacctacgtcttcctgccgcccaagccggga
tcggccatgtggaagatggtcgacgccatcaaccgcgaggaaaaggccaagacgggcgcc
gacgccccggcgctcagcgacgtcctcgaccaccccttttggcgagagcacggcaccgcc
gacgacttctccaccgacatcaaggccaaaaaggcgtggcggatgcccgcgtcgcaggtc
gagcacgtccgcgccctcatggccaagtactcgggctcgcacaacttccacaacttcacc
atcgacaaggagttccgcgaccgggcggcgcagcgcttcatgaaggccctccacgtgtcc
gagcccaagatggtcaacggcaccgagtggatctcgatcaagttccacggacagagcttc
atgtaccaccagatccgcaagatgattggcctcgtcgtcctcgtcggccgcaccaatgcg
cccgcctcgctcatccccgagacgtttggcccggcgcgcatccacatccccaaggcgccc
ggcctcggcctgctgctcgaggagcccctgtttggcggctacaaccagcgcgtcgagcac
agcaaccgcaagctcgacaacctcgtctcgagcaacgccaaaaagggcgtcgccgccgcc
aacaaccccgaggacgagaagcgcgacgccgtcgagtttgactcgcacaagagcgagatg
gaggcattcaagcagcagtacatctacgaccgcatcatgctcaccgaggaggagacgagc
gagttcggaaagtggctcaactacctcgacgtcttccagggccccgacttcgagtacctc
aacccaaagggcgtcatcccgcagagcgccatcctcaaggtcggcgagctgcgccgcgca
cccggcggacagctcaagggatcctttggcggcggcaccaccgccgcgacgacgacgacg
acgacgacagacgcggcggcggcaggggaggagggcgccgcaatcgacggcagcgacgac
gacgacgacgacgaacgcgcctttctcaacagcaaggaccgggcagagtacgaaggttga
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