KEGG   Pseudozyma flocculosa: PFL1_06902
Entry
PFL1_06902        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PFL1_06902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_06902
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     PFL1_06902
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I Acetyltransf_13 zf-C2H2_3 MutS_II MutS_IV Acetyltransf_7 Acetyltransf_1
Other DBs
NCBI-GeneID: 19320969
NCBI-ProteinID: XP_007881358
UniProt: A0A061H3S0
LinkDB
Position
Unknown
AA seq 1707 aa
MAPSTSKSPARASGGGGKQSTLLGFFGKAAATTPAKPSPKSTASGSAATPSRTPARPASA
RPTPNGSSSSVSSSSSTSTSTLSSLGSVDQRAATAAAAATTPSASKKRAAAGGPASSTRT
AAVAATKPLSSRLTPPASSDPDGMDIDEDDEDLMPVRRRSAAKRTISYAESDDEAGGGGG
ETDSEADEDGGSFSPSASKKRRSSGGRTLKRSRTARDDDNFIVSDNDVEEEEEEDDDDER
ALAATDDDSEDEAPLSKKAPSRAKAKAAHADTSPRPSSLGGFRMGSGPSSRPSPSSSSGR
LDQPGRPALGSRPTPPGGSSLSHLTKAERRVIEEKRKRAENEQAYSFLVDLRDKDGKRPG
EPDYDPRTVHIPASAWKDFTPFEVQFWKIKQNHFDTVLFFQKGKFYELYEDDALIGHREF
DLKLTDRVKMKMVGVPESSFDMFAAKFLALGYKVGRVDQTETAVAKGMRVGEKSRGGGGE
IVNRELRHVLTSGTIVDASALPDDLNSYCVSIKEVERAASAGADGGPRFGVCTLDASTAE
FNLSEFDDDASRTRLETLLRSLRLKEVLHEKGGLSPATARVLRNTVPAGCQTTMLKPGSD
RNFNIFDPLRQDRCMVLDAQSLTHLNVLQNDQGTDVGTLHRLLNRCATPFGKRLFKIWMV
APLADIDAIRARQDAVDDFLGCPAFEEAFDAFARQLPDIERIIPRIYAGKCRPKDFTRVL
TAFGHFRESVERLRALAESFAGEGGGRVAALLASIPDVTALAGELRSRFQLADDGSFTPR
RGVFAPYDEAEAALLAIEAQLEDELQACRRLLKLNAARCGWKHLGTKDIYQIEVPATTKV
PASWVKLSGTKDRHRFYSPEVRDLVQELKEARETRLAALKQFHAALFAEFVAESARYVEA
VKAVAEVDCLLSLAKASYAIGEPTCRPELVEHDTALVEFDELRHPCIAEGVDFIPNDIRL
GGDSDEVVILTGGNMAGKSTTARTTATAVIIAQLGCRVPALRARISPVDRIASRMGANDQ
IFRNNSTFMVEMLEASRIVRECTPRSLVVMDELGRGTSTFDGQAIAFAVLHHLVSRTRCL
SFFLTHYTSLAYDFQGYPRVSNKHLQVLVDDDRREVVFTYRLVDGVAESSYGTQVAALAG
VPHEICDRAAAVSKQFLESTKEHLARREQSRIPLATLSDFTHLVRLADDPAAANXXXXXX
XAASQLAVIRAQVKSLASAAASSAPPGQHGERGKAAALAARPDVALIPSAMPVSVFGQHE
RKTPAIGKTRAATTYAGRARRMRSDELPSDDGPASLPSTPTKRMRRSVDVATASSFGPID
TEGDNDGDGHGDDGDVVRRSLSSPVTSRSTATTSLLFGGARSRRHQAAAASATAAAAKRS
EQLILDLGQRIRVVCNECGMQYDTSSPEDGTLHAKYHDRTIKGVDWTSKCLLAAGREVAS
FRISDPKTKPSVLRPSGSASAQGRGTGADAGDERERPGPRLQERTPGDEVRILCSKLGQV
KEAVATRKLTELMASVDEALGASTLPDSTLKACKLFVAVKAGRGVGAALVGRVALGTARR
VVGGGAGGDVDQDNDNDNDNDKENRAGVAAPRATYQVLHDGGEAIFVSEPLSASATPPIG
VHRIHVIARFRRSGLASRLLDAAADHSVYGLNLARLEQMYGGRAGTVAFSQPTDAGRKLA
ERWIRSGGGGGEGAAKKQDGRLVVYEG
NT seq 5124 nt   +upstreamnt  +downstreamnt
atggccccctcgacgtccaagtcgcctgcccgagccagcggcggcggcggcaagcagtcg
acgctgctgggcttcttcggcaaggccgctgcaaccacgccggccaagccgagccccaag
agcaccgcctccggatcggccgcgacgccaagccgcacgccggcccgtcccgcgtcggct
cgcccgacgcccaacggctccagcagcagcgtctcctcgagcagcagcaccagcaccagc
accctcagcagcctgggcagcgtcgaccagcgcgctgccaccgctgctgctgccgccacg
acgccttccgcctcgaagaagcgcgctgcagcgggcgggcccgccagttcaacacggacc
gccgcagtcgccgcaaccaagccactttcctcccgcctcacgccaccggccagcagcgat
cccgacggcatggacatcgacgaggacgacgaggacctcatgcccgtccgcaggagaagc
gcggcgaagcgcaccatctcgtacgccgagtctgacgacgaggccggtggcggcggcggc
gagactgacagcgaggccgacgaggacggcggctccttttcgccgtcggccagcaagaag
cggcgctccagcggcggtcggaccctcaagcgttcgcgcaccgctcgcgacgacgacaac
tttatcgtcagcgacaacgacgtcgaggaggaggaggaggaggacgacgacgacgagcgc
gctctcgccgccaccgacgacgacagcgaggacgaggcgccgctctcgaaaaaggcgccc
tcgcgcgccaaggcgaaggcggcccacgccgacacgtcgccgcggccctcgagcctcgga
ggcttccgcatgggcagcggcccgtcgtcgaggccgtcgccgtcgtcgtcgtcgggccgc
ctcgatcagccagggcgaccggcccttggcagccggccgacgccgccgggcgggtcgtcg
ctgtcgcacctcaccaaggccgagcgccgcgtcatcgaggagaagcgcaagcgggccgaa
aacgagcaggcctacagcttcctcgtcgacctgcgcgacaaggacggcaagcggcccggc
gagcccgactacgacccgcgcaccgtccacatccccgcctcggcctggaaggacttcacg
ccgttcgaggtgcagttctggaagatcaagcagaaccactttgacacggtcctcttcttc
caaaagggcaagttctacgagctctacgaggacgacgcgctcatcggccaccgcgagttt
gacctcaagctgacggaccgagtcaaaatgaagatggtcggcgtgcccgagtcgtcgttc
gacatgtttgcggccaagttcctggcgctcggctacaaggtgggccgcgtcgaccagacc
gagacggccgtggccaagggcatgcgcgtcggcgaaaagtcgcgcggcggcggcggagag
attgtcaaccgcgagctgcgccacgtcctcaccagcggcaccattgtcgacgcctcggcg
ctgcccgacgacctcaacagctactgcgtctcgatcaaggaggtcgagcgggcggcctcg
gccggcgccgacggcggcccgcgcttcggcgtctgcacgctcgacgcctcgacggccgag
tttaacctgtccgagtttgacgacgacgcgtcgcgcacccgcctcgagacgctgctgcgc
tcgctccgcctcaaggaggtcctgcacgaaaagggcggcctcagcccggcgacggcgcgc
gtgctgcgcaacacggtgcccgccggctgccagacgacgatgctcaagccgggctccgac
cgcaacttcaacatctttgatccgctgcgccaggaccgctgcatggtgctcgacgcccag
tcgctgacccacctcaacgtgctccagaacgaccagggcaccgacgtcggcacgctccac
cgcctcctcaaccgctgcgccacgccgtttggcaagcgcctcttcaagatctggatggtg
gcgccgctcgccgacatcgacgccatccgcgcgcgccaggacgccgtcgacgacttcctc
ggctgccccgccttcgaggaggcctttgacgcgttcgccaggcagctgccggacatcgag
cgcatcatcccgcgcatctacgccggcaagtgcaggccgaaggacttcacccgcgtgctg
acggcgtttggccacttccgcgagagcgtcgagcggctgcgcgcgctggccgagtcgttt
gccggcgagggcggcggccgggtggcggcgctgctggcgtcgatcccggacgtgacggcg
ctggccggcgagctgcgcagccgcttccagctggccgacgacggctcctttacgccgcgg
cgcggcgtgtttgcgccctacgacgaggccgaggcggcgctgctggccatcgaggcgcag
ctcgaagacgagctgcaggcgtgccgccgcctgctcaagctcaacgcggcgcgctgcggc
tggaagcacctcggcaccaaggacatctaccagatcgaggtgcccgccacgaccaaggtg
cccgccagctgggtcaagctcagcggcaccaaggaccgccaccgcttctactcgcccgag
gtgcgcgacctggtgcaggagctcaaggaggcgcgcgagacgcggctggccgcgctcaag
cagttccacgccgccctctttgccgagtttgtcgcggagagcgcgcgctacgtcgaggcc
gtcaaggccgtcgccgaggtcgactgcctgctgagcctggccaaggcgtcgtacgccatc
ggcgagcccacgtgccgcccagagctcgtcgagcacgacacggccctcgtcgagttcgac
gagctgcgccacccgtgcatcgccgagggcgtcgactttatccccaacgacatccggctc
ggcggcgacagcgacgaggtcgtcatcctcaccggcggcaacatggccggcaagagcacg
acggcgcgcaccacggcgacggccgtcatcatcgcccagctgggctgccgcgtgccggcg
ctgcgggcgcgcatctcgcccgtcgaccgcatcgcgtcgcgcatgggcgccaacgaccag
atcttccgcaacaacagcacctttatggtcgagatgctcgaggcgtcgcgcatcgtgcgc
gagtgcacgccgcgctcgctcgtcgtcatggacgagctgggccgcggcacctcgaccttc
gacggccaggccatcgcctttgccgtgctccaccacctcgtcagccgcacccgctgcctc
agcttcttcctcacccattatacgagcctcgcctacgacttccagggctacccgcgcgtc
agcaacaagcaccttcaggtcctcgtcgacgacgaccggcgcgaggtggtattcacttac
cggctcgtcgacggcgtggccgagtcgtcgtacggcacccaggtggcggcgctggccggc
gttccccacgagatctgcgaccgggcggcggccgtgtcaaagcagttcctcgagtcgacc
aaggagcacctggcgcgccgcgagcagagccgcatcccgctcgccacgctcagcgacttc
acccacctcgtccggctcgccgacgacccggccgccgccaacnnnnnnnnnnnnnnnnnn
nnggcggcctcgcagctcgccgtgatccgcgcgcaggtcaagagccttgcgtcggccgcg
gcgtcgagcgcgccgccgggacagcacggggagaggggcaaggctgctgcgctggctgct
agacccgacgtcgccttgattccctcggctatgcctgtgtcggtgtttggccagcacgaa
cgcaagacgccggccatcggcaagacacgtgcggccaccacgtacgctggacgggcgcgg
cggatgcggagcgacgagctgccgtcggacgacgggccggcctcgttgccttcgacgccg
accaagcggatgcggcgctcggtcgacgttgcgacggcctcgagctttgggccgatcgac
acggaaggcgacaatgacggcgacggccacggcgacgacggcgatgtggtgcgtcgctcg
ctcagcagccccgtcacgtcgcgttccacggcgacgacgtcgctcctctttggcggtgcc
aggtcgcggcgccaccaggcggcggcggcgagcgcgacggctgcggcggccaagcggtcc
gagcagctcatcctcgacctgggccagcggatccgcgtcgtgtgcaacgagtgcggcatg
cagtacgacacgtcgtcgcccgaggacggcacgctgcacgccaagtaccacgaccggacc
atcaagggcgtcgactggacctccaaatgcctgctggccgcgggcagggaggtggccagc
ttccgcatcagcgaccccaagaccaagccgtcggtgctgcgcccgagcggcagcgcgagc
gcccagggccgaggcacaggagcggacgccggcgacgagcgcgagcgcccagggccgagg
ctacaggagcggacgccgggcgacgaggtgcggatcctgtgctcgaagctgggccaggtc
aaggaggcggtggcgacgcgcaagctgaccgagctgatggcctcggtcgacgaggcgctg
ggcgcatcgacgctgccggactcgacgctcaaggcgtgcaagctgtttgtcgccgtcaag
gcggggcggggcgtcggtgccgccctcgtgggccgcgtcgccctcggcaccgcacgccgg
gtggtcggcggtggcgcgggcggcgacgtcgaccaagacaacgacaacgacaacgacaac
gacaaggagaaccgggccggggtcgcggcgccgcgggccacctaccaggtgctgcacgac
ggcggtgaggccatctttgtctctgagccgctctcggcctcggcgacgccgccgatcggg
gtgcaccggatccacgtcatcgcccgcttccgccgcagcgggctggccagccggctgctg
gatgcggcggccgaccacagcgtctacggcctcaacctggcgcgcctcgagcagatgtac
ggcggccgcgcgggcaccgtggccttcagccagcccaccgacgccggtcgcaagctggca
gagcggtggatccgcagcggtggtggcggcggcgagggggcggcgaagaagcaggacggc
cgactggtcgtctatgagggatga

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