Pseudozyma flocculosa: PFL1_06935
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Entry
PFL1_06935 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PFL1_06935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfp01002
]
PFL1_06935
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfp04131
]
PFL1_06935
04121 Ubiquitin system [BR:
pfp04121
]
PFL1_06935
Enzymes [BR:
pfp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PFL1_06935
Peptidases and inhibitors [BR:
pfp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PFL1_06935
Membrane trafficking [BR:
pfp04131
]
Endosome - Lysosome transport
Others
Others
PFL1_06935
Ubiquitin system [BR:
pfp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PFL1_06935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
USP8_dimer
Rhodanese
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
19320999
NCBI-ProteinID:
XP_007881177
UniProt:
A0A061H4Z8
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MPAANGSSGSSFLSPNHPINLRKQAAPKLDSSFSVRSYIGGANALLEKAQAADAQGQLEV
AFVNYLKAAGVASFISKHDDWPKIQKGRGPVYQAYNELMQQVPAFIDRTKRIEEQLRMRE
EKNALQQREAQAKEHENRAKASERGQPGSGAYDGQPAAEAGGMPTGSPAQDGGLNAAERE
QGGGTDAPTAAGTEVLGSRHGAHTRMSASLAERLQALRGAGVDGGIGGTGNGAPDGRARS
SSLSDGSIGGASVGQLPRTGDLASQLEALAERDDRGSDDEPEPPVARDGFASPTLPHDDS
FSMHAVSNALRGLQSHDRGQQAPAADGSAAPDGAPHFPHVPTASEFESSYPTLDAFERGA
AGDHTPTANGAAPRLAAEHQGDGDDDAGHSMFPARPRTRSSSSSSAAAAARRPRDGLPNA
ARMSLQFEQRGSVASPPASLRPGVAPKPSKAAAPSPVNGAGGAGVTGAAAASLIVGPKPS
APLTNHITVQDLFGFLYPGFEELTDADGNKKIGKRRGMDVLLLDVRSRQEWETCRIKGGR
GVCIEPIILREGMTSADLEDKLLLSPEDEQASFAARNEVDLVVLYDGNLRSLKHAPGAPT
PQTQAEAAARQRMEIVIKAIYENEFRKVLKHQPVLLVGGLESWHKALGEKGVIRERGPAP
GASTSGGGGGGGVGRRTSISFEAGTRFPTADSPSSRTAAAEQAAQQELKRSRRQQQILPD
SIASPPLASSTVPRKPGIHPGSVYPGSPASSSSTSFGSMSGYAAGGAGAAGTPGSFAPPS
IPPRTYQTPGGPAALTAGAPSFPPAAAARPGDYFSGAPSDRQQGIPRTNSSTFDYPQLRQ
NGQPYGMPTPQPPPAAASSAGPRQTSARCRTAVGQDLAAGASATAAPSYAGYQPTPSRMY
SGSGTTASNGRSADDVRIGLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKRAINK
VNPLGTQGALAEAFAQLVRVMWSEQYTFVSPVTFREAIARFAPAFRGYDQHDSQEFLAFL
LDGLHEDLNYVVRKPPPVEMTPERETELETLPQQIASVKEWGIYRMRNDSLIVDWFQGQF
RNKMTCLTCGKTSTTYNAFMYLSLPIPHGRGISKVTLQQCLDAFVREEILDKADAWNCPR
CNKPRKASKRLSISRLPQVLLIHLKRFSFKGPFTDKIDTTVTFPTSGLDLTNYMPPPLPP
GAVGKGVPTSMSQQPPYTYDLYGVTHHFGSLNTGHYTATIRNHGDWWYCDDSRISKGDDR
QIHTNSPYVLWFRRRPNH
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccaacggatcctcgggctccagcttcctctcgcccaaccaccccatcaac
ctgcgcaagcaggccgcccccaagctcgactcgtccttctccgtccgctcctacatcggc
ggcgccaatgcgctcctcgaaaaggcccaggccgcggatgcccagggccagctagaggtc
gcctttgtcaactacctcaaggccgccggcgtcgcctcgttcatctccaagcacgatgac
tggcccaagatccaaaaaggccgcggccccgtctaccaggcctacaacgagctgatgcag
caagtgccggctttcatcgaccgcaccaagaggatcgaggagcagctgaggatgcgcgag
gaaaagaatgcgctgcaacagagagaggcccaggcaaaggagcacgagaaccgcgccaag
gcctcggagcggggccagcctggcagcggcgcatacgacggccagcccgcagccgaggcc
ggtggcatgcccaccgggtctccggcccaggatggcggcctcaatgccgccgagcgcgag
cagggcggcgggaccgatgcgcccaccgcggcggggacagaggtgctgggctcgcgccac
ggcgcccacacgcggatgagcgcatcgctggcggagcggctgcaggcattgaggggcgcc
ggagtcgacggcggcatcggcggcaccggcaacggcgcacccgatggccgtgcgcgctcc
agctcgctttcggatggcagcatcggcggcgctagtgtcggccagctcccacgcaccggc
gacctcgcctcgcagcttgaggccctcgccgagagggacgaccgcggcagcgacgacgag
ccagagcctcccgttgccagggacggcttcgcctcgcccacgctgccgcacgacgacagc
ttctcgatgcatgccgtcagcaacgcccttcgcggcctccagtcccacgaccgtgggcag
caggcgccggccgccgatggatctgccgctccagacggcgcaccgcacttcccgcacgtc
ccgactgcctccgagttcgagagcagctatcctacgctcgacgcctttgagcgcggagct
gccggcgaccacacgccgacggccaacggagcggcgccgcgactggcagcggagcaccag
ggcgacggcgacgatgatgctggccacagcatgtttccggcccgcccgcgcacccgctcg
tcgtcgtcgtcgtcggccgccgcggctgcccggcggcccagggacggcctgcccaacgcg
gcgaggatgagcctgcagttcgagcagcgtggctcggtcgcctcacccccggcctcgctg
cggccgggcgtcgcgcccaagccgagcaaggccgccgcaccctcgcctgtcaatggcgct
ggcggcgcaggcgtcacgggtgcggcggcggcgtcgctgattgtgggaccgaagccgagc
gcgcccctgaccaaccacatcaccgtccaggacctctttggcttcctctatccgggcttc
gaggagctgaccgacgccgacggcaacaagaagatcggcaagaggcgcggcatggacgtg
ctgctgctcgacgtccgcagccgccaggagtgggagacgtgccgcatcaagggcggcagg
ggcgtttgcatcgagcccatcatcctgcgggaagggatgacgtcggcggatctcgaggac
aagctgctgctgtcgcccgaagacgaacaggccagctttgccgcgcgcaacgaggtcgac
ctcgtcgtcctgtacgacggcaacctgcgctcgctcaagcacgcgcccggggcccccacg
ccgcagacgcaggccgaggcggccgcgcgccagaggatggagattgtcatcaaggccatc
tacgagaacgagttccgcaaggtgctcaagcaccagcccgtgctgctcgtcggcggcctc
gagtcgtggcacaaggcgctgggcgaaaagggcgtcatccgggagcgcgggcctgccccc
ggcgcatcgaccagcggcggcgggggcgggggcggcgtcgggcggcggacgagcatctcg
ttcgaggccggcacgcgcttcccgacggccgacagtccgagttcgcgcaccgcggcggca
gagcaggccgcccagcaggagctcaagcggtcccggcggcagcagcagatcctgccagac
agcatcgcctcgccgccgctggcgtcgtcgacggtgccgcgcaagcccgggatccacccg
ggctccgtctacccggggtcgccggccagctcgtcgagcacgtcgttcgggtccatgtcc
ggctacgccgccggcggggcgggggcggcaggtaccccgggctcgtttgcacctccgtcg
attccgccgcggacctaccagacgcctggcggtcctgcggccctgacggcaggcgcaccc
tccttcccgcccgctgcggccgcgcggcccggcgactacttcagcggcgcgccctcggac
cggcagcagggcatcccgcgcaccaactcgagcacgttcgactacccgcagctgcggcag
aacgggcagccgtacggcatgccgacgccgcagccgccgccggccgccgcgtcgtccgcc
gggcctcgtcagacgtcggctcggtgccggactgccgtcggccaggacctcgctgctgga
gcttcggcgacggcggctcccagctacgccggctaccagccgacgccgtcgcgcatgtac
agcggcagcggcaccacggcgtccaacggccggtcggccgacgacgtccgcatcggcctg
acgggattgaagaaccttggaaactcgtgctacatgaactcgacgctgcagtgcctcagc
gcgacgatcccgctggcgcgcttcctgctcgacggctcgtacaagcgggcgatcaacaag
gtgaatccgctgggcacgcagggtgcgctggccgaggcgtttgcgcagctggtgcgcgtc
atgtggtcggagcagtacacgttcgtgtcgccggtgacgttccgcgaggccattgcgcgg
ttcgcgcccgccttccgcggctacgaccagcacgacagccaggagtttctggcgttcctg
ctcgacgggctgcacgaggacctcaactacgtggtgcgcaagccgccgcccgtcgagatg
acgccggagcgcgagacggagctcgagacgctgccgcaacagattgccagcgtcaaggag
tggggcatctaccgaatgcgcaacgatagcctcatcgtcgactggttccagggccagttt
aggaacaagatgacgtgcctcacgtgcggcaagacgtcgacgacgtacaacgcgtttatg
tacctctcgctgccgatcccgcacgggcgtggcatctcgaaggtgacgctgcagcagtgc
ctggacgcctttgtgcgcgaagagatcctggacaaggcggatgcgtggaactgcccgcgg
tgcaacaagccgcgcaaggcgagcaagcgcctctcgatttcgcggctgccccaggtgctg
ctgatccacctgaagcggttcagcttcaagggcccgtttaccgacaagatcgacaccacc
gtcacgttcccgacgtcggggctcgacctgacaaactacatgccgccgccgctgccgccc
ggtgcggtgggcaagggcgtgccgaccagcatgagccagcagccgccgtacacctacgac
ctgtatggcgtcacgcatcactttggaagcctcaataccggtcattacacggccacgatc
cgcaaccacggagactggtggtactgcgacgacagccgcatcagcaagggcgacgaccga
cagatccataccaactcgccctacgtcctctggttccgccgtcgtcccaaccactaa
DBGET
integrated database retrieval system
