KEGG   Pragia fontium: QQ39_02025
Entry
QQ39_02025        CDS       T03952                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pfq  Pragia fontium
Pathway
pfq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    QQ39_02025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfq03019]
    QQ39_02025
   03009 Ribosome biogenesis [BR:pfq03009]
    QQ39_02025
Messenger RNA biogenesis [BR:pfq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QQ39_02025
Ribosome biogenesis [BR:pfq03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    QQ39_02025
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AKJ41012
UniProt: A0ABQ5LHV8
LinkDB
Position
464247..464792
AA seq 181 aa
MSENENNLIWIDLEMTGLDPQSNRIIEIATIVTDANLNILAEGPVFAIHQTDEHMAIMDE
WNTTTHTASGLVKRVKESTLDEQAAELKTIEFLRQWVPEGCSPICGNSIGQDRRFLYRYM
PELERYFHYRYLDVSTLKELARRWKPEILDGIKKQSTHQALDDIRDSIAELAYYRENFIK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgtctgagaatgagaataacctgatttggatcgatctggaaatgacaggtttagatcca
cagagtaatcgcatcatcgaaattgccactatcgttaccgatgccaacttgaatattctg
gcggaaggaccggtttttgccattcatcaaaccgatgagcatatggcaatcatggatgag
tggaatactaccacgcataccgccagtggtctggtgaagcgagtaaaagagagtacgctg
gacgagcaggcggcggagctaaagaccattgagtttttacgtcagtgggttcctgaaggc
tgttcacctatctgtggcaacagtattggtcaggatcgtcgctttctgtatcgctatatg
cctgaactagaacgttacttccactatcgttatctggatgttagtaccttgaaagagctg
gctcgtcgttggaagccggaaattttggacggcatcaaaaagcagagcacgcatcaggcg
ttggacgatattcgggattctattgccgagttggcctattaccgtgagaattttattaag
ctgtaa

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