Pragia fontium: QQ39_02025
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Entry
QQ39_02025 CDS
T03952
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pfq
Pragia fontium
Pathway
pfq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QQ39_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfq03019
]
QQ39_02025
03009 Ribosome biogenesis [BR:
pfq03009
]
QQ39_02025
Messenger RNA biogenesis [BR:
pfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QQ39_02025
Ribosome biogenesis [BR:
pfq03009
]
Eukaryotic type
Pre-60S particles
RNases
QQ39_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKJ41012
UniProt:
A0ABQ5LHV8
LinkDB
All DBs
Position
464247..464792
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AA seq
181 aa
AA seq
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MSENENNLIWIDLEMTGLDPQSNRIIEIATIVTDANLNILAEGPVFAIHQTDEHMAIMDE
WNTTTHTASGLVKRVKESTLDEQAAELKTIEFLRQWVPEGCSPICGNSIGQDRRFLYRYM
PELERYFHYRYLDVSTLKELARRWKPEILDGIKKQSTHQALDDIRDSIAELAYYRENFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatgagaataacctgatttggatcgatctggaaatgacaggtttagatcca
cagagtaatcgcatcatcgaaattgccactatcgttaccgatgccaacttgaatattctg
gcggaaggaccggtttttgccattcatcaaaccgatgagcatatggcaatcatggatgag
tggaatactaccacgcataccgccagtggtctggtgaagcgagtaaaagagagtacgctg
gacgagcaggcggcggagctaaagaccattgagtttttacgtcagtgggttcctgaaggc
tgttcacctatctgtggcaacagtattggtcaggatcgtcgctttctgtatcgctatatg
cctgaactagaacgttacttccactatcgttatctggatgttagtaccttgaaagagctg
gctcgtcgttggaagccggaaattttggacggcatcaaaaagcagagcacgcatcaggcg
ttggacgatattcgggattctattgccgagttggcctattaccgtgagaattttattaag
ctgtaa
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