Pragia fontium: QQ39_02465
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Entry
QQ39_02465 CDS
T03952
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfq
Pragia fontium
Brite
KEGG Orthology (KO) [BR:
pfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfq03016
]
QQ39_02465 (truB)
Enzymes [BR:
pfq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QQ39_02465 (truB)
Transfer RNA biogenesis [BR:
pfq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QQ39_02465 (truB)
Prokaryotic type
QQ39_02465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKJ41087
UniProt:
A0ABQ5LI59
LinkDB
All DBs
Position
558482..559429
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AA seq
315 aa
AA seq
DB search
MGRPRRRGRDIHGVLLLDKPTGMSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYRVIARLGQRTNTSDSDGEVIAERPVNFTQASLDTALAQFRGETD
QVPSMYSALKYQGKPLYEYARAGIEVPRESRKITVYELKFIRWQDNELELEIHCSKGTYI
RTIIDDLGELLGCGAHVIYLRRLNVADYPTERMVTLEQLQQIQSDALAEERSPVAELDPF
LLPMDSAVADFPEVNLLPVMGVYVKQGQAVQVAGAPSSGLVRITVGDEREFIGVGKIDDD
GRVAPRRLVVEQPAE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtcctcgtcgtcgcggccgtgatattcacggcgtattattactggataagccg
acgggcatgagctccaacgatgtcctgcagaaagtaaaacgcatttataatgctaacaaa
gcgggtcataccggagctttagatcctttagctaccggtatgctgccgatttgtcttggg
gaagcaaccaagttctcccagtttttattggatgcggataagcgctatcgggtgattgct
cgcttaggtcagagaaccaatacttcggactctgatggtgaagtgatcgctgaacgtccg
gtcaactttacgcaggccagtttagatactgcgttagctcagtttcgtggtgaaaccgat
caggttccttccatgtattctgcattaaaatatcagggtaaacccctgtatgaatatgcc
agagcgggtatcgaagtaccgcgcgagtcgcgcaagattaccgtttatgaattgaagttt
attcgttggcaagacaatgagctggagttggaaattcactgctctaaagggacgtatatt
cgtaccatcattgacgatctcggcgaattgcttggttgtggtgctcacgttatttattta
agacgtttgaacgttgcagactacccgacagaaagaatggtaacgttagaacaactgcaa
cagattcagagtgatgcactggcggaagaacgttccccggtggctgagttggatccgttc
ttactaccgatggatagtgcggttgctgattttcctgaagttaacctactgccggtgatg
ggcgtgtatgttaaacaagggcaggcggtacaggttgccggcgcacctagcagtggtctg
gtacgcatcaccgttggtgatgaaagagagtttatcggcgtcggaaaaattgacgatgat
ggccgagtcgctccccgtcgtttagtggtagaacagccagccgaatag
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